BGIOSGA005524

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Revision as of 02:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005524| Description = (Rice Genome Annotation Project) expressed| Definition = Oryza sativa Indica Group BGIOSGA005524, complete gene.| tag...")
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Gene Name

BGIOSGA005524

Description

(Rice Genome Annotation Project) expressed

Definition

Oryza sativa Indica Group BGIOSGA005524, complete gene.

LocusTag

OJ1611_C08.7

Ensembl Transcript ID

BGIOSGA005524-TA

Ensembl Protein ID

BGIOSGA005524-PA

Length

4635

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34675675..34680309

Sequence Coding Region

34680289..34680309,34680098..34680171,34678812..34678953,34678376..34678663,34678144..34678297
,34677129..34678073,34676768..34677006,34676614..34676687,34676214..34676325
,34675675..34675698

Genome Context

<gbrowseImage1> name=IndicaChromosome02:34675675..34680309 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:34675675..34680309 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCTGACCTCTGCGCAGGGAGGTGGTGGAGTCGGCGTGATGGAGAGCGGCGTGAAGCGGCATTTCTTCCCCCTTACGAGCTTGCAAATCGGGGATTTACAATCATATCTTGCTGAACTTACTATATTTTTGTGCCCTCATACGAAGAAGTTTCTCATATTGCTTGATAACCGGCCATGGCTGCAAGACCAGGACACAAAACCTGCTCACCTGTGGCAATTGATGGTCACAAAGTCAAGACTTTCACCTTTTGCAAACACTAGAACTAGGAGAAAGGGAGATGAAACTGGGAAGAAACTTGTATTCTCTAAAGATCCTAGACATGGTTCTCATTTGTGGAATCCATCATCCAGATGGTATACCTTAATTGATGATGCCATGCGGAATAAAAAGCTTCATGTGAATAGGCTGAAGGATTCTCGCCTGCTGAACAAGGAACTGCACCGAACCTTATATGGCTTTATAATTTTTGAGGTAGACTGGGCTGATGTGCGCGGCATGAACTATTTCAATGAACTTCAGACTGATACTTCTATGGCAGTGGAAGCTAAAACAATGAAGAGATGGGAATTTGAGAGTGTCAACCAAGCTTCATCATTAATCACTTCATGGTTTTCTGGAAATTACTCTGAATGCCAGCTCCTACAGGATTATTTGAACAGCATCTCTCCTAAAGGAAATGTGTTTTATGACGCTCAGAATTATTTCTCAACACCTGAAGGGGACAGTGAGAATGTACAGAGTGAAGATGACGATTCTGGACCTAGTCAATGCATGAGAGAGTCGTCAAGTTTTACAAGCTCCTCATACACACCACCTCCTTGCTCTGGACCTTACAAGAGAAGAAAGATAATAAGATCTGCTGCTGGAAATAATATGTCTGAAGAATCATATTCTGAAGTTGTGACCTCACCAACACATTCATCATCTCCATCTTCCTCGTGCTGCAGTGATGATGATTGTGGCAAGACTCTGCTCGAGCCTAGCACATATAAGGATGTGTTGATCTTATTCCGGTTCGATGACCACGATCTCCCTTTCAGACTAAAAGAAGTAATACTTTCTGATGTGAGGCTGTTAACATTGCTAGAGTATGGCCTTCCTTCATGGGTCATTTTTCTCCAGTCATATCCAGTGTTCTGCAAGACATATCGCCCATGGATGTGTCCTCTTGCCAGGGCATTGTATGTCTTGATGTCAATAGTTACTGTTCTCATAGGATTTTATGACCTCTACAAGAATGTCCCCATGTTGAAGGCAACTGCATCAAGATTGTTTGGCCCTTTCTTTGACTGGATAGAGACGTGGGAAATGATTTCACGACTGAAGTATCTTGGAACCATGCTTTTTCTACATAACTTCCAGCAGGCTTTTACATGGTCTCTTAAGATTGTAACTGCTACTAAATCTGCTCTAAGTGTTTTGACAAAGCCAATCATGGGACCAATTTTGGAGGTTCTTGAATTTACCCTGCCGCTATGGAACCTTTGTGCTGAAACAGTAGGACATCTGAGCTCAGTTATCATGTTGGCGATGGAGACTTCATGCAGTGTAGTTATCAGTACAATGCAGATGATTATATGGCCTTTTTGGCTGGTCTTCAGTGTTGTGCTTAATGTTGCAAATTCAGTCCTGTACCCTTTCGTTTGGCTTCTTGGAGAAATTCTAGCTGCACCTTTCCGGCTTGTTGTTGCGATAGCAAGTTTTGTGGCAGACTCTTTTGTGGACATTGTTGGAGTTCTGAGGGAGACCTGGTCTACATTGAGTTCCTTATATCAAGTTGGTTCTGCATCTGGATCGACCGGACTTGCATCTGAAACTACCATCTGGGGGTCACTATGGAAAGATCTTCTGTACCAGATTTTCCGTGCGATTCGAAGCATTCTGTATGGTTTTGTTGCCTTCTTTTCAACATGCAACAGGCATCGGCTTAGCATTTACAACCACATTCAAGTATTTCTCCGACGCCTATCTCGTGTTTTAACTGGTGCACAGCATACCACCTCTTGTGAAGGCACACGGAGGTATTCTAGTCAAAATCATCCTCAAAGGAAAACTCACACGAGATAA</cdnaseq>

Protein Sequence

<aaseq>MPLTSAQGGGGVGVMESGVKRHFFPLTSLQIGDLQSYLAELTIFLCPHTKKFLILLDNRPWLQDQDTKPAHLWQLMVTKSRLSPFANTRTRRKGDETGKKLVFSKDPRHGSHLWNPSSRWYTLIDDAMRNKKLHVNRLKDSRLLNKELHRTLYGFIIFEVDWADVRGMNYFNELQTDTSMAVEAKTMKRWEFESVNQASSLITSWFSGNYSECQLLQDYLNSISPKGNVFYDAQNYFSTPEGDSENVQSEDDDSGPSQCMRESSSFTSSSYTPPPCSGPYKRRKIIRSAAGNNMSEESYSEVVTSPTHSSSPSSSCCSDDDCGKTLLEPSTYKDVLILFRFDDHDLPFRLKEVILSDVRLLTLLEYGLPSWVIFLQSYPVFCKTYRPWMCPLARALYVLMSIVTVLIGFYDLYKNVPMLKATASRLFGPFFDWIETWEMISRLKYLGTMLFLHNFQQAFTWSLKIVTATKSALSVLTKPIMGPILEVLEFTLPLWNLCAETVGHLSSVIMLAMETSCSVVISTMQMIIWPFWLVFSVVLNVANSVLYPFVWLLGEILAAPFRLVVAIASFVADSFVDIVGVLRETWSTLSSLYQVGSASGSTGLASETTIWGSLWKDLLYQIFRAIRSILYGFVAFFSTCNRHRLSIYNHIQVFLRRLSRVLTGAQHTTSCEGTRRYSSQNHPQRKTHTR</aaseq>

Gene Sequence

<dnaseqindica>1..21#139..212#1357..1498#1647..1934#2013..2166#2237..3181#3304..3542#3623..3696#3985..4096#4612..4635#ATGCCTCTGACCTCTGCGCAGGTATTCGACGAGATACCTCTGCAAATTTTTGCCTGCGCCTTTGCCTGGATTTTGTGGTGGCCTCTGATCTCCCGTTTGATGTGGAATTTTTTGCGTGTTTTCGCGTATGTGGTTCAGGGAGGTGGTGGAGTCGGCGTGATGGAGAGCGGCGTGAAGCGGCATTTCTTCCCCCTTACGAGCTTGCAAATCGGGTAAGTCTCCTTCTGTGTGCGGGGGCTCTGTTTTGATCTCGCGGTGGAAACGTTCTTTTCATTGCTTTTGGTGGAATGTTCCAGTCTCGTATAATTTGGGTGCTAATTTGTGTGGTCCACAATGCAATGTAGTCCCGTTGTGATATAAGTGAAAAAAACGAGAAGTTACGAGAAAGTTAACTGGATAACTTCGATGAACACGGTTGAAGTTAGTTACGCTTGTTTCCCAAAGGGCAGTGGAAATTGATCAAAACTACAACAGTCGTTTATTCGTTTGTGTTACTTGGTGGAGGAAGTTCCAGCATACTGTTTATGAGAAAAAGACAGGAAAGCTCACTTGTGGGAGTGGGTAGCTGAATTGTCTTGTATTGCTTCATTCTAGTAGCATTTATTTTGTTACAGAATACTGTATATCTTGATGAGAGATATGACTAAAGTTAGTAGGAGTAGAAAGGAAAGCTGTTCTTGGAAATCTTTCCAATTTAAGGTAGTAGATGTTTCCAGTGTAAAGGCACAGGATCGATACTATACTGGAACGGTTCAATAATTCAGGGTTTGTCATTTCTCCCTACATATTCATGCAGAGATGATAAAACAAACTTACTATACCATCACGTTGTTGTTTGCAAAACAATCTAGGTTTTATTCCTAGGTTTAGTTGCCTATCGTAGGTTGATAATTTTGTGTTTTGTGCACATTCATCATACCTTATCGACTGGAAATCTGGAATTGTGGCTTTACTTTACTTCTAGGTTCAGTAGGCTGCAATACATGACTCCGTCCGTACACTGGAGGAAAGAAAATGTTAAATACTGTGTTCCTGATTAATTTTATTTTGATCTGCTATTGTCCACCTGGATCATATGATATCAAACAGTGAACAATGTGGCGGTTATTTTATCCTTTTTCTGTACATCCATTGGACTGCATTTGTTGTGCAAAGTCGTATGACCTTAAGTTGTATTGCAATTATCTTAATTTCTGAGGTGGGCAATTGTGTTAAGAATTCTTGCAAACTGCAAGTTTTGTTTTACTCCTCACAGTTTTGCTTGCATTTACTAACCTCATGATCTTAAAGTGCAATGTAAATTTGGATTTTCATCTATATTACAGTTAGTTAGTCTGATATAATTATTATATGCAGGGATTTACAATCATATCTTGCTGAACTTACTATATTTTTGTGCCCTCATACGAAGAAGTTTCTCATATTGCTTGATAACCGGCCATGGCTGCAAGACCAGGACACAAAACCTGCTCACCTGTGGCAATTGATGGTCACAAAGGTATGCTTTACTGTTTTACGAGCCACTTGTAAGCACACAAACGAGTACTTATGAATATTTGTTCATTGCTTACACTTTCATGTATTGCCCTTGTTACATCGATTCTGGCTCGTCTTACTTGTTGACTTCTTGTCATTTTTTGCTCCAGTCAAGACTTTCACCTTTTGCAAACACTAGAACTAGGAGAAAGGGAGATGAAACTGGGAAGAAACTTGTATTCTCTAAAGATCCTAGACATGGTTCTCATTTGTGGAATCCATCATCCAGATGGTATACCTTAATTGATGATGCCATGCGGAATAAAAAGCTTCATGTGAATAGGCTGAAGGATTCTCGCCTGCTGAACAAGGAACTGCACCGAACCTTATATGGCTTTATAATTTTTGAGGTAGACTGGGCTGATGTGCGCGGCATGAACTATTTCAATGAACTTCAGGTATTGTTTTAGACTGAACATGATATTCATAGCTATTAATGGATGGTACATGCTTATTTTGTTTTTATGTTGTTGTAGACTGATACTTCTATGGCAGTGGAAGCTAAAACAATGAAGAGATGGGAATTTGAGAGTGTCAACCAAGCTTCATCATTAATCACTTCATGGTTTTCTGGAAATTACTCTGAATGCCAGCTCCTACAGGATTATTTGAACAGCATCTCTCCTAAAGGTAAAGGCATGAATGTGCTCTCCATTCTTCTCTGCTGCATGTGCAGACCACTTATATGCTTGCTGTACAGGAAATGTGTTTTATGACGCTCAGAATTATTTCTCAACACCTGAAGGGGACAGTGAGAATGTACAGAGTGAAGATGACGATTCTGGACCTAGTCAATGCATGAGAGAGTCGTCAAGTTTTACAAGCTCCTCATACACACCACCTCCTTGCTCTGGACCTTACAAGAGAAGAAAGATAATAAGATCTGCTGCTGGAAATAATATGTCTGAAGAATCATATTCTGAAGTTGTGACCTCACCAACACATTCATCATCTCCATCTTCCTCGTGCTGCAGTGATGATGATTGTGGCAAGACTCTGCTCGAGCCTAGCACATATAAGGATGTGTTGATCTTATTCCGGTTCGATGACCACGATCTCCCTTTCAGACTAAAAGAAGTAATACTTTCTGATGTGAGGCTGTTAACATTGCTAGAGTATGGCCTTCCTTCATGGGTCATTTTTCTCCAGTCATATCCAGTGTTCTGCAAGACATATCGCCCATGGATGTGTCCTCTTGCCAGGGCATTGTATGTCTTGATGTCAATAGTTACTGTTCTCATAGGATTTTATGACCTCTACAAGAATGTCCCCATGTTGAAGGCAACTGCATCAAGATTGTTTGGCCCTTTCTTTGACTGGATAGAGACGTGGGAAATGATTTCACGACTGAAGTATCTTGGAACCATGCTTTTTCTACATAACTTCCAGCAGGCTTTTACATGGTCTCTTAAGATTGTAACTGCTACTAAATCTGCTCTAAGTGTTTTGACAAAGCCAATCATGGGACCAATTTTGGAGGTTCTTGAATTTACCCTGCCGCTATGGAACCTTTGTGCTGAAACAGTAGGACATCTGAGCTCAGTTATCATGTTGGCGATGGAGACTTCATGCAGTGTAGTTATCAGTACAATGCAGATGATTATATGGCCTTTTTGGCTGGTCTTCAGTGTTGTGCTTAATGTTGGTATGTTTTCTGCAACCTCTGAGACGATATGTCTGCTACTCTGCTCTTCAATTTGTATTGACCTCACTATGATAAACTTTTTGTGTTGATTCTGATATCTTTCTCTTTTGTATTAACTTCAGCAAATTCAGTCCTGTACCCTTTCGTTTGGCTTCTTGGAGAAATTCTAGCTGCACCTTTCCGGCTTGTTGTTGCGATAGCAAGTTTTGTGGCAGACTCTTTTGTGGACATTGTTGGAGTTCTGAGGGAGACCTGGTCTACATTGAGTTCCTTATATCAAGTTGGTTCTGCATCTGGATCGACCGGACTTGCATCTGAAACTACCATCTGGGGGTCACTATGGAAAGATCTTCTGTACCAGGTAACAAAAATATGTTGATGCGGCCAGTAATTATATTAGGAATTAGGATATATGGAACTTACTTTGACTTTCTTTTTCAGATTTTCCGTGCGATTCGAAGCATTCTGTATGGTTTTGTTGCCTTCTTTTCAACATGCAACAGGCATCGGCTTAGGTAACCTTCCTTCTCATCCGTATGTGGTAGTATTTTCAAGGTCACATGAACATTAAATATGAAATCAGGTATATACAGAAAACATCTCGTATTGACTGTCGAATTAGAATTTTACCTGATTAATGCCTCATCTAACATGTCATTCTGTTGTGAACTTCACTGGTACTCTGGTAGTGATTTAGTAACATGGTCGAGTGGTTCAAAATAAATAACAGGATTATATAGTGTTTCAAAGTTTACATTATCACTTCATGTGTGCTGTGTGTTAACTACTACTTCATGCTGCAGCATTTACAACCACATTCAAGTATTTCTCCGACGCCTATCTCGTGTTTTAACTGGTGCACAGCATACCACCTCTTGTGAAGGCACACGGAGGTATTCTAGTCAAAATCATCCTGTAAGTCCTTACTTTTTTAAAAAAGTTACAGTCTATCATGATTTTTTTTCATGAAGTTTAGGGGTAAAAATGACCCTTGGAATTGAAATCACTAGTTCATATAACAGTCTGTTATGACAATCTGAGTTATGCCTCATTGCTGTTTGTGCCTATACTTTTCCCACTAAAAAAGTGCAAAGTAGTCTTTACAATCTTGGTTGTTTTTCCTAGATGTTAAGCTATGTTGAACTACGAAATGTCTACAGAATCAAGTATGAAACTATGAATGCATTTTAACCCACAAGTGGTGATAACTGTGAATATGGCTGCTTTTCTTTTCACTGCACGAACTGCTGTAACTTGGATTATCAAAATCATGCTTATATCATCTTTTGCATTCCACATATATTCTACAGAGAGTCCAACATGAAGTAACAGTTCAAAACTAACTTTTCTATATTATAGTTTCAACTAACTTGTCTATATTATAGTTTCAACTCCTTACATAAACATGTCTGGTGTATGTACTTCTGTAGCAAAGGAAAACTCACACGAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005524

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005524&oldid=59076"