BGIOSGA005541

From RiceWiki
Revision as of 02:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005541| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005541, complete gene.| tag = OJ1767_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005541

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005541, complete gene.

LocusTag

OJ1767_D02.8

Ensembl Transcript ID

BGIOSGA005541-TA

Ensembl Protein ID

BGIOSGA005541-PA

Length

1811

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34410262..34412072

Sequence Coding Region

34411841..34412072,34411440..34411549,34410998..34411360,34410262..34410774

Genome Context

<gbrowseImage1> name=IndicaChromosome02:34410262..34412072 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:34410262..34412072 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAAGGCCGGTGACGCCGAGCAAGCGGTGCACAGCACTGCGCCGGCGGCCGGCCACGGCTCCGCCGTCCGCCGGTACGCCGCCACGATTGGCGGGGCTGTCGATGCCAAGTGTGTCCTTGTGCTGTTCCTCTCCATCGGCGTCTTCGTGCTGGTCCTCTTCATGCTTCTTCCTCTCCATGACCATGCATCAGAAACCATCCCTGATGACCACCCTGGGGTACTTCCTGGTGAAATTCAGGCTAGCTTCTTCTTGTTAAAGAAACGTCAACAGCTCATTCCACATGTCAGAAGGCTACAAAAGGACATATACAGAGAAATAGGGATCCCCAATACTACGGTTTCGGTTTCTATGCATACATCCAAATATAAGGATTCCACTTATGTAAAATTTGGTATTCTACCGAACCCAAGAAATTCCTCCATAAGTGCACAATCCATTATTGCCCTGAGAAAAAACTTGATACAACTTACGCTTGAGCAGTCGAATTTATCTTTGACATCATCTGTCTTTGGAGATCCATATTGCTTGGAGATCTTGGGGTTCCCAGGAGGGATCACGGTGCCTCCACCACCTGATGGCAATATATGCCCAACAGCTCTTTTCAATGTCACACTCAACATGACTATACAACAACTAAGGGTGCACCTCAAGGAGCTAGAGAGTGAGCTTAGAATTATATTGCAGCTGACACCATATGAGGACTTAATTGTAGAGATAACAAATGAAAATGGTTCGACGATCAACCTGCCCGTTACAGTCCACATTTTAATTGCCCCAAACTATCCTAGCAATTATCTAGAAACCTACAGACTGAAACAACTAGCCCAAATCATCATTAAATTAATTCCAAAAAACCTTGACCTAAACCCAATATTTGGCATGATTGAGAATTTGTGGCTGTCACCATGTCTACAAAGTTATATTCCATCATGTGCTCCTAATCCAGCTCCAGCTCCAGCACCATCACTATCCCCATCCAATCCTGAACATCCACAGCCAACTACCACCAAGCCTTATGGAAGTTTTTCATGCCCGGCTTTGGAAAGAAGAAAAACTGTCTCTGTACATCGCAGGTTATCGACGATATCTCCCATGATGGTACCACCAGAAATACCGACGAGGTTTGATAGTTGGAGTGTACACACTGACAGGAAAAATCGCTCTCCACTTGCAAAACCAATGTCCCTTGTGCCAGCATCCCCATCAAAATAA</cdnaseq>

Protein Sequence

<aaseq>MGKAGDAEQAVHSTAPAAGHGSAVRRYAATIGGAVDAKCVLVLFLSIGVFVLVLFMLLPLHDHASETIPDDHPGVLPGEIQASFFLLKKRQQLIPHVRRLQKDIYREIGIPNTTVSVSMHTSKYKDSTYVKFGILPNPRNSSISAQSIIALRKNLIQLTLEQSNLSLTSSVFGDPYCLEILGFPGGITVPPPPDGNICPTALFNVTLNMTIQQLRVHLKELESELRIILQLTPYEDLIVEITNENGSTINLPVTVHILIAPNYPSNYLETYRLKQLAQIIIKLIPKNLDLNPIFGMIENLWLSPCLQSYIPSCAPNPAPAPAPSLSPSNPEHPQPTTTKPYGSFSCPALERRKTVSVHRRLSTISPMMVPPEIPTRFDSWSVHTDRKNRSPLAKPMSLVPASPSK</aaseq>

Gene Sequence

<dnaseqindica>1..232#524..633#713..1075#1299..1811#ATGGGCAAGGCCGGTGACGCCGAGCAAGCGGTGCACAGCACTGCGCCGGCGGCCGGCCACGGCTCCGCCGTCCGCCGGTACGCCGCCACGATTGGCGGGGCTGTCGATGCCAAGTGTGTCCTTGTGCTGTTCCTCTCCATCGGCGTCTTCGTGCTGGTCCTCTTCATGCTTCTTCCTCTCCATGACCATGCATCAGAAACCATCCCTGATGACCACCCTGGGGTACTTCCTGGTAAGAACACTTTCCTTCTGCAGCAACTTTCAGCACTGATTAACCGTCTGATCATATAAATTGACAAGCTACATGATTTAATTATGTTTGTAAAGTCAGATGCATTATCTCCAAAATCCAGACAGTAGAATCAAAAGATTTCGTAACCAGATGATCTCAAATAGTGGTAGATTAGAAGATACCAGCTACTCATGCTAGCTAAGCTTTCAGCAAATATGAAGATAAATTGTGCCAAGCTTACCTTTATCCTCTTATGCATCTCTCAAAAGAAAACGCCTATCATTCCTCCAGGTGAAATTCAGGCTAGCTTCTTCTTGTTAAAGAAACGTCAACAGCTCATTCCACATGTCAGAAGGCTACAAAAGGACATATACAGAGAAATAGGGATCCCCAATACTACGGTATGCCATTATTCCACTTTGACAAAAGAATTTGTCTTGCACTCAAGCTATACTGAAATGATCGCTGAAAATTTTGCAGGTTTCGGTTTCTATGCATACATCCAAATATAAGGATTCCACTTATGTAAAATTTGGTATTCTACCGAACCCAAGAAATTCCTCCATAAGTGCACAATCCATTATTGCCCTGAGAAAAAACTTGATACAACTTACGCTTGAGCAGTCGAATTTATCTTTGACATCATCTGTCTTTGGAGATCCATATTGCTTGGAGATCTTGGGGTTCCCAGGAGGGATCACGGTGCCTCCACCACCTGATGGCAATATATGCCCAACAGCTCTTTTCAATGTCACACTCAACATGACTATACAACAACTAAGGGTGCACCTCAAGGAGCTAGAGAGTGAGCTTAGAATTATATTGCAGCTGACACCATATGAGGTCCATACATCTTATCTCATCTGATATAGTCAGTTACTCCCTCCCTTTCACAATGTAAGACTTTCTACCATTATCCACATACATATAGATGTTAATGAATCTAAACACATATGTATGTCTAGATTCATTAACATCTAAATGAATGTGGGCAATGCTAGAAAGTCTTACACTGTGAAATGGAGGAAGTATTTGACAGCAAGTGACAACATTTTATTTTGTGCAGGACTTAATTGTAGAGATAACAAATGAAAATGGTTCGACGATCAACCTGCCCGTTACAGTCCACATTTTAATTGCCCCAAACTATCCTAGCAATTATCTAGAAACCTACAGACTGAAACAACTAGCCCAAATCATCATTAAATTAATTCCAAAAAACCTTGACCTAAACCCAATATTTGGCATGATTGAGAATTTGTGGCTGTCACCATGTCTACAAAGTTATATTCCATCATGTGCTCCTAATCCAGCTCCAGCTCCAGCACCATCACTATCCCCATCCAATCCTGAACATCCACAGCCAACTACCACCAAGCCTTATGGAAGTTTTTCATGCCCGGCTTTGGAAAGAAGAAAAACTGTCTCTGTACATCGCAGGTTATCGACGATATCTCCCATGATGGTACCACCAGAAATACCGACGAGGTTTGATAGTTGGAGTGTACACACTGACAGGAAAAATCGCTCTCCACTTGCAAAACCAATGTCCCTTGTGCCAGCATCCCCATCAAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005541