BGIOSGA005543

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Revision as of 02:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005543| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005543, complete gene.| tag = OJ1004_...")
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Gene Name

BGIOSGA005543

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005543, complete gene.

LocusTag

OJ1004_A11.31

Ensembl Transcript ID

BGIOSGA005543-TA

Ensembl Protein ID

BGIOSGA005543-PA

Length

3705

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34384028..34387732

Sequence Coding Region

34387694..34387732,34387205..34387264,34387065..34387118,34386922..34386982,34386758..34386834
,34386378..34386427,34385888..34385970,34385542..34385612,34385068..34385218
,34384623..34384756,34384460..34384552,34384028..34384123

Genome Context

<gbrowseImage1> name=IndicaChromosome02:34384028..34387732 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:34384028..34387732 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTACACCAAGGAGCAGCTCCTCGCGCGACTCCAGGAGCTCAACATTGAATTCTCGTGCTACGATCACCCGGTTGTGTTGACGGTGGAGGAACAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTGCTACTGAAGGACAAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGCTGGCACCAAAGTTGACATGAAAATTTTATCACAGCGTCTTGGTTTGGGAAAAGGTGGTCTGCGGATGGCTCCTGAGGAAAATTTGCTTGAAGTGCTTCAGGTACCCTTAGGCTGTGTTACTCCATTTGCACTACTTAATGAGTCTGCAAGTGCTGTCTCACTACTACTGGACCAAGGTTTCAAGTCAAAACAGAGCTGCTACTTCCATCCACTGACAAATGATGTGACAATCGCTCTCAGCTCAAGCAATCTGGACAAGTTTCTCATGTCCATTGGGAGGCAACCAGCTTATGTAGACTTAGAGGCTTCACCAGTTGTAGGCAAGGATAATCCTCCTGATCTAGCAGATCTTGTACCATCAGGTGTCCCAAATTCTGCAGAACCAATTGAGAAGGTCACACCTACAAATGTTCCTCGTCAAAATGATGTGCCCAAAGAGAAAACATGTCTTCCTGAAGTGAAGGCTAAGCCTAAAGTTCAGAACAAGGGTGCAGAAAAGACGCAGAGCAAGATACCTACAAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATCATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAGCAGGAAGAACTTTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGACGAGTCTGAAGAATGCAGCATACACCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MGYTKEQLLARLQELNIEFSCYDHPVVLTVEEQAKHVGHLGGALSKNLLLKDKKHRLYVVSALAGTKVDMKILSQRLGLGKGGLRMAPEENLLEVLQVPLGCVTPFALLNESASAVSLLLDQGFKSKQSCYFHPLTNDVTIALSSSNLDKFLMSIGRQPAYVDLEASPVVGKDNPPDLADLVPSGVPNSAEPIEKVTPTNVPRQNDVPKEKTCLPEVKAKPKVQNKGAEKTQSKIPTNGANVEKFVNDVFDIMSPLFLSEVSKKLNVKQEELSSIFDGFKEQATIDLESVTTSLKNAAYTAGFEAGFETMLNSGLKGQASRK</aaseq>

Gene Sequence

<dnaseqindica>1..39#469..528#615..668#751..811#899..975#1306..1355#1763..1845#2121..2191#2515..2665#2977..3110#3181..3273#3610..3705#ATGGGGTACACCAAGGAGCAGCTCCTCGCGCGACTCCAGGTTGGTGCCGCCGCCGCCGCCCACTGGGCACCACTGCTCTCTACCTCCCAACTCCTCGACTGTTCGCTTTGCGTCGTTTCCTGGTAGTGGGGATCGGCTGGATTGGTGGTCGTGGATGCGCCGGTGCTACGGATTGTAGCGTCGGCGAGATGCTTCCCGTTCCGTTCTAGCTTGATTTGGTTTTGGTTAGCATAGTTATAAATGGAAGCGCGATAGGGCGTTTTTGCTGCCGAATTTAGTTGGGTTGTGCTGCGGATAGTTTTTTTTTTTTTTAACCCCGGATGTGCGCATGAATCGAAGGCCGGAATTGCCCAGTTATATTGTGCGATTATCGAGAATTGTCACATCCTATGTGTGGCAAACTAGAATTGCTTGCCTTCTGGCATCACAGTGGACCGCGACTCAATTTAGTGGTATTGTCTTGTGCAGGAGCTCAACATTGAATTCTCGTGCTACGATCACCCGGTTGTGTTGACGGTGGAGGAACAGGTTTGCAAACCGTGAAGTTCACACTTCGTTCTACAATACTTTTGATGGATTTACTGTAAGTGCTAATTGAACTTCCGCAATGTTAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTGCTACTGAAGGTATGTGTCTTACCAAGTGATGGACAGTTAATTGCTTGGAACCTATTTTCATGTATTGATATTTTTAAATTCTGAGTTTCAGGACAAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGCTGGCACCAAAGTTGACATGAAAAGTAGGTGCATTTCTTGAAAACTATATCCTCTTTGTTACTTATTTGAATGTATGCCAACTAATTTTCTGTTTTCCTTAAACCCATTAGTTTTATCACAGCGTCTTGGTTTGGGAAAAGGTGGTCTGCGGATGGCTCCTGAGGAAAATTTGCTTGAAGTGCTTCAGGTCAGCCATTATTCATGTTTATCTAAAACTGCATACTGTTTGAAAGCAACGAAGAGCGAAATATAGTGCATCTTTCAGTTTCATATATTACGTGAAAATTTCACAAAAGTTAAAAAAAAAATTCTGCCTGTGATGAATATTGTTGGTTGTGAAAAAACAAATATCCCTTCATGTATTGTCTTGTCCTTTTTCTGTTTCATCTTTAATGAGTACTTGAATTTTGGTGCTTCCTGGCTCTACCAGCATTTTAGCTGGATAGCTTATTGTTATAGTTTCACCCTATATAATTTTCTTCACATGTTAATGTATTTTGTCCTTGATTATGTCCAGGTACCCTTAGGCTGTGTTACTCCATTTGCACTACTTAATGAGTCTGCAAGGTATGGGTGCTTGCTTTCACATGTTAATTAAATATGATTGGAATGGGAATTCGGTCCATTGTTGTGGAATTTGTATTTCTAATAGCTTGAAGCCTTTAAACTTGAAAAAAAAAAAACTTTGTGAGCTCTGTTCACTTTACCCTAAACGGTGAAGAGCTATTTACTAGTGTGATGTGCTCATTTTATATCCGAGCGTCGTTGTTTTCATTCCACTTGATGGTTTCCACTTTTAGGATAGAAATTAGAAATGCAAATGCTATGGTTGTGACTGATGGAACCACATGCCTCTTGTTTTATAATGCTTAGCTTTTAATGTGTCCTATTATATTATACTTATATATCAGTTTTTTTCATGGTTATGCTATTGCCTTTTTAACTGATTCATATAACTGTGTATTTGCAAGCAGTGCTGTCTCACTACTACTGGACCAAGGTTTCAAGTCAAAACAGAGCTGCTACTTCCATCCACTGACAAATGATGTGACAATCGGTATGGTTGATACTATTATCACTTCCGTAACCAACACTGTTTCATCACACCATGTGTAATGTCATTAGTTAGTCATTACTGTGATACTAGAATGCACACCATTCCGTTAGTTAGTTATCATGGCACAGTTTCATGTAGGTTGCACAAGGCCTTGGTCTGGCTACTGTTATATTATTTTTATAAGGAGGGAGACCTCCGTTCAACTTTCTTTACTTTTTTCAAAAGAAGAATAGATTAGTAAAATGGCTTTCTTTTCCTGATTTACTCCATTTCAGCTCTCAGCTCAAGCAATCTGGACAAGTTTCTCATGTCCATTGGGAGGCAACCAGCTTATGTAGACTTAGAGGTAATCTTTGGATCACCGGAATATGTGCATATGATTTCATTCGGTCCTTCCGTCCCAAATTATAAGGCCCTCAATATCATACTTTGATCATTAATTTCTTCCATAATGTTATTAACAACTACAAAATTAGTATCATATGAAAGTACTTTCATACACAAGTCTAAATGTTATGAATGCGTAACACTAAACATAGATATTATTAGCTTAATTATTAGTTAAAAGTTACCAATATTGATTTTTCCTAGAAATAAGGGTGCCTTATATTTTTGGGATGGAGGGAGTATGTGCTGGGAAGGGATTGTGAAATTATTGGTTTTGTGCAGGCTTCACCAGTTGTAGGCAAGGATAATCCTCCTGATCTAGCAGATCTTGTACCATCAGGTGTCCCAAATTCTGCAGAACCAATTGAGAAGGTCACACCTACAAATGTTCCTCGTCAAAATGATGTGCCCAAAGAGAAAACATGTCTTCCTGGTAAGCTGTTATCTACTGATATATATATTGTCCCTTGTTATTTCTTCTGTATATGCAATCTATAGTCCTTACATTTGGGCAGTACATGAGCGTAGTAGTAGTGCTACTATAAGGAGGTACTACTGTATTATAACAACTATTGTTAATTAAACAAGCAGGAATAGATGACAGTGTGAGGATGAAACATGTGAACTTGTTCATGTTGTCTTTTACTCATTAACCTCCATTTCTTTTACATTTTTCTTGTGTTTTTTTTTATTACACTTTCAAGTTACAATAACCAGACATGGCATACTTTGTTCTTGTATCAGAAGTGAAGGCTAAGCCTAAAGTTCAGAACAAGGGTGCAGAAAAGACGCAGAGCAAGATACCTACAAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATCATGTCCCCGTTGTTCCTTTCTGAGGTAATAAGATTGTGCATGATGACCCTCATGAATAATGTCCACTCTTTTTGTTGATAAATTTCTTTTGCAGGTATCAAAGAAACTGAATGTTAAGCAGGAAGAACTTTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGGTTAGTTCTCTTCTGCTATATGTTAGCACTGATTGCTCATTTGTGTTCATGATAGGCAACCGTGGTAAATACCCTAGCTTCCACTAATATGTGTCGAACAAGCATCTGTGGTAAAAATTAACCAAACAAAAAAAAAGCCATGGGCCTAAGTAAATGTTGCAAGTCACAATTTCTTTGTGAAGGCCTTCATAAGAAACTTTCGTTGTGGTAAAATCAGGCATCAAACTGCCCACGTTTGGAGTTTGGTGTGGTGATGTACTTCAGTTTGAACTTCAATAAATTTCTACCTCGTTAAGTTGTGAAGCATGTAACGGACGCGGCTGTGTTTCACTGCAGACGAGTCTGAAGAATGCAGCATACACCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005543

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005543&oldid=59095"