Os12g0514500

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0514500| Description = Similar to Heat-shock protein precursor| Version = NM_001073414.1 GI:115488789 GeneID:4352339| Length = 6045 bp| De...")
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Gene Name

Os12g0514500

Description

Similar to Heat-shock protein precursor

Version

NM_001073414.1 GI:115488789 GeneID:4352339

Length

6045 bp

Definition

Oryza sativa Japonica Group Os12g0514500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20066449..20072493

Sequence Coding Region

20066680..20066865,20067027..20067116,20067200..20067305,20067385..20067559,20067834..20067936
,20068367..20068621,20068711..20068788,20068893..20068985,20069076..20069207
,20069883..20069987,20070112..20070186,20070269..20070325,20070404..20070517
,20070598..20070741,20070871..20070954,20071056..20071149,20071229..20071354
,20071492..20071565,20071657..20071860,20072219..20072359

Expression

GEO Profiles:Os12g0514500

Genome Context

<gbrowseImage1> name=NC_008405:20066449..20072493 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:20066449..20072493 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcggggcctcgaggcgttccgtctgcaccgccgcggcggcggcggcggccgggtcacgccgccgcgccgccgccggcgtcgcctccgccgtttccggggattcctccgtctcgtcttcctcggcgcccccacgctcggtgattaatggggagcctggtgtccctcagcttcagaagaggttgctctctgtgcttgctgcgcccaagcttaccgggaccgacaatgctgcctccctcaagctgagggagggttcccttgttggcaggcgatatgaatcgagtgctgcagcagttgattcttctgatacgccacctgtggagaagcatgagtaccaggcagaggtcaataggctcatggacttgattgttcacagcttgtatagcaacaaggaggtgtttcttcgagagcttgtcagcaatgcaagtgatgcacttgataagttgcggtatcttagtgtcactgatcctgatcttataaaggatggtgctggtcttgacattcgcatccaaacagataaggagaatggaataataacaatcactgatactgggattggtatgacgaggcaagaacttgttgattctcttggaactatagcgagcagtggaactgccaaattccttaaggcactaaaggagagccaagaggctggtgttgacagcaacttgattggtcaatttggtgttggattctattctgcgtttcttgtttctgataaggttgcagtgtcaactaagagcccaaaatctgacaagcaatatgtttgggaaggcgaggcagaatctagttcttacaccattagagaggagacagacccagagaagctccttcctaggggaactcgccttactctgtaccttaagcgtgaggacaagggtttcgcacaccctgagaagattcagaaacttgtgaagaattactcacagtttgtttccttccctatttatacttggcaagagaaaggttacacaaaagaggttgaggtcgatgaacctgttgaagctaaagaaggcgacgatgagactaaaacagaggttaagaaaaagacaaaaacagttgttgagaagtactgggattgggagcttacaaatgaaacacaacctatatggcttcggaaccctagagaggtatcaactgaggagtacaatgagttttacaagaagacattcaatgagtacatggatcccttagcatcctcacactttactacagagggggaagtagaattcagatctattctctatgtgcctgctacaaagaaggaggatataactgataggaagaccaaaaatatcaggctttatgttaagcgcgtgtttatatcagacgactttgatggggaactgttcccaagatacctgagctttgtgaggggtgttgttgactcaaatgaccttccattaaatgtttctcgtgagatcctgcaagaaagccgaattgtgcgtataatgagaaagaggttggtgcgaaaggcctttgatatgatacttggcatctcttgtagcgaaaacagagatgactatgaaaggttctgggaaaactatggcaagttcttaaagctgggttgcatggaagacaaggaaaatcacaagagaattgctcctttgctccgattcttttcttctcaaagcaatgaagaattaattagcttggatgaatacgtggaaaatatgaaacctgagcaaaaggacatttactacattgctgcggacagtttgagtagtgcaaaacatgctcctttcctggagaagctcaatgaaaaagagtacgaggttctatttttagttgacccaatggatgaagtgtctgtcacaaatctgaactcctacaaggataagcgtttcgttgatattagcaaggaagacttggacttaggtgataagaatgaggaaaaagagaaggagatcaagcaggaatacagccaaacatgtgactggatcaagaaacgcttgggtgaaaaggttgctcgagttgatatatcaaaccgtctcagctcatcaccatgtgttctagttgcagctaagtttggttggtctgcgaacatggaaaggttgatgagagcgcaatctatgggtgacatgtcatctctggatttcatgcgttctaggaaagtttttgaaatcaacccagagcatgagatcatcaagggcttgaatgctgcctgcagagccaaccctgatgacccagaagctctaaaggctgtagatatcctgtttgaaacttctatgatctctagtggctttacacctgacaaccctgccgagctaagtgggaagatatatgagatgatgagcacagctatggccagcaagtgggcctcgcacgctcaacccgctgagatgaacctgcagcgagactcacctgtcagctctgagccgattgaagccgaggtgattgagccggagttggtggacgatagccagaagaaataa</cdnaseq>

Protein Sequence

<aaseq>MLGASRRSVCTAAAAAAAGSRRRAAAGVASAVSGDSSVSSSSAP PRSVINGEPGVPQLQKRLLSVLAAPKLTGTDNAASLKLREGSLVGRRYESSAAAVDSS DTPPVEKHEYQAEVNRLMDLIVHSLYSNKEVFLRELVSNASDALDKLRYLSVTDPDLI KDGAGLDIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGTAKFLKALKESQEA GVDSNLIGQFGVGFYSAFLVSDKVAVSTKSPKSDKQYVWEGEAESSSYTIREETDPEK LLPRGTRLTLYLKREDKGFAHPEKIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEPV EAKEGDDETKTEVKKKTKTVVEKYWDWELTNETQPIWLRNPREVSTEEYNEFYKKTFN EYMDPLASSHFTTEGEVEFRSILYVPATKKEDITDRKTKNIRLYVKRVFISDDFDGEL FPRYLSFVRGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISCSENRDD YERFWENYGKFLKLGCMEDKENHKRIAPLLRFFSSQSNEELISLDEYVENMKPEQKDI YYIAADSLSSAKHAPFLEKLNEKEYEVLFLVDPMDEVSVTNLNSYKDKRFVDISKEDL DLGDKNEEKEKEIKQEYSQTCDWIKKRLGEKVARVDISNRLSSSPCVLVAAKFGWSAN MERLMRAQSMGDMSSLDFMRSRKVFEINPEHEIIKGLNAACRANPDDPEALKAVDILF ETSMISSGFTPDNPAELSGKIYEMMSTAMASKWASHAQPAEMNLQRDSPVSSEPIEAE VIEPELVDDSQKK</aaseq>

Gene Sequence

<dnaseqindica>5629..5814#5378..5467#5189..5294#4935..5109#4558..4660#3873..4127#3706..3783#3509..3601#3287..3418#2507..2611#2308..2382#2169..2225#1977..2090#1753..1896#1540..1623#1345..1438#1140..1265#929..1002#634..837#135..275#ccacaaaaaccctaccgccgcccccaaaaccctcgcctcgccgtcgccgccgccgccgccgttgctgtctcccctcggcgaatccacggtagctctcccgctccccctcctcggtggtaggagtagcggaggagatgctcggggcctcgaggcgttccgtctgcaccgccgcggcggcggcggcggccgggtcacgccgccgcgccgccgccggcgtcgcctccgccgtttccggggattcctccgtctcgtcttcctcggcgcccccacgctcggtacgtgccatctccggccttgactttctctacggctgcggctgtttcgggctggttgcgggttcagagggaaaatgtgggggctggtcgtgatcgcaaattagcggaaattgagtggtgcttaatctgtatagtactcttgttcgcccattacgtggtatcaatttgagttaattttgcggtgtgtgttaattcaagctaattcgttggtttaagttcatcttgttgattgtgatatttaatagtcgattgggggaatcattagatttttactgtctgattgattgtttgaattgagtcgagcctttgagcttctgtatgtgatactcacaacccacatgtatcgtccgattctcaggtgattaatggggagcctggtgtccctcagcttcagaagaggttgctctctgtgcttgctgcgcccaagcttaccgggaccgacaatgctgcctccctcaagctgagggagggttcccttgttggcaggcgatatgaatcgagtgctgcagcagttgattcttctgatacgccacctgtggagaagcatgagtaccaggcagaggtaactactggagcaatggctaatgttttatttttcttaatcaatctcgtgttaccaacggtgtcatgatattgtccaatgtgcatggcaggtcaataggctcatggacttgattgttcacagcttgtatagcaacaaggaggtgtttcttcgagagcttgtcaggtgggtgtcattcaagaacataagttgttcactaattgaagtttgtactaatcatcatcttggtttactcttgtgcgtttagtttgatctctatggtttaattttttttaatttcttcatcgtgtatctgtttgcagcaatgcaagtgatgcacttgataagttgcggtatcttagtgtcactgatcctgatcttataaaggatggtgctggtcttgacattcgcatccaaacagataaggagaatggaataataacaatcacgtaagtattagttacttgatcaattatgtggctcctttcttgcaaactcatgcctgcatttgctcctttttatctttagtgatactgggattggtatgacgaggcaagaacttgttgattctcttggaactatagcgagcagtggaactgccaaattccttaaggcactaaaggtgtgttccatttgcactttgctgatgttaccttcatgtccttatttttctttgtttcttatcctgtcatattactaatcttaagtattattatataataggagagccaagaggctggtgttgacagcaacttgattggtcaatttggtgttggattctattctgcgtttcttgtttctgataaggtaagatgctatcgtgattgtctttaattagaaggttaatagctggctgttaatgacctagtgtttatttcccattgtccttggctgacatgttaatatttcatgaatattatttattttgtctaataggttgcagtgtcaactaagagcccaaaatctgacaagcaatatgtttgggaaggcgaggcagaatctagttcttacaccattagagaggagacagacccagagaagctccttcctaggggaactcgccttactctgtaccttaaggtctatttgcttattttgatatcatccaactcattttatacatgacctgtttctaactacaattcttggtattgtttcagcgtgaggacaagggtttcgcacaccctgagaagattcagaaacttgtgaagaattactcacagtttgtttccttccctatttatacttggcaagagaaaggttacacaaaagaggtgaatgctcttcctttgttaattattttttattggaccaatgcatcaatttaattgtggcatattttgctcttttaggttgaggtcgatgaacctgttgaagctaaagaaggcgacgatgagactaaaacagaggtaactgtgatatgcttttctgccaagataaatctgttatacttaatacttgtgcataattgtattaccatgatattaacaggttaagaaaaagacaaaaacagttgttgagaagtactgggattgggagcttacaaatgaaacacaacctatatgggtgagatttgatctgttcagtgtgctaatatgtttttattaatgaatgcacccatcacttattgaaaatatgaaggttccaaaaaaaaactgaagctttttttttcattctctgtttatggtagcttcggaaccctagagaggtatcaactgaggagtacaatgagttttacaagaagacattcaatgagtacatggatcccttagcatcctcacactttactacagaggtatgtctgattgcatttgattagttatcagttgattctttctttttgtcaattgaaccagaatcaaggttgatataggtagcagtgcagttattttgatgatatgttcattgtgcatgactattctatgaagacaagttttttttcatgcttatacatttgacaaatttaaccaaacttgcgatatcacagtattctgtaactgctgtgaccaaattaatatcttcatactattctttcacaaagagtcaaagacacacgagtgctattcatcaggcaaacatatttatatacaggaacagataatagttcatccttcgttaacactaactcagctggtaaagttatgtaatacatgtctattgctgcatatgcgactcttcatttcaattatggtggttctattcaaatatttttttggatatccacaagcatgcgaatgtttggttttgtaacattgtattgcattattcagtgaaaatgatattgtgatcagtgcggcaaagatgccaaactggttcatctttttggttagaattgcaccgatctccatgtgatagttcatttatcttcatggattggcaccaatatagcacatctgtctatctcacggtaaaactgtgcctgattgcacttcacaggctcacttggctgtgtttgattttattcatgcagggggaagtagaattcagatctattctctatgtgcctgctacaaagaaggaggatataactgataggaagaccaaaaatatcaggctttatgttaagcgcgtgtttatatcagacgactttgatggggaactggtatgcttaatacacagcagctcttcatgattctttgtcaagttttagataaccatggaaatctgacaataaaaaaatgttattgatcagttcccaagatacctgagctttgtgaggggtgttgttgactcaaatgaccttccattaaatgtttctcgtgagatcctgcaagaaagccgaattgtaagtgttaatgaatggttttctgtctatgtcttgtacatttctatcatgatcttctaacattgatttatctttcctttttttttccttcttgtttgttacaggtgcgtataatgagaaagaggttggtgcgaaaggcctttgatatgatacttggcatctcttgtagcgaaaacagagatgtaagttgtttactttccttttgtgcatgatgcctctgttctctcccttatccttcagtagttcagttctcacctgaaatttactgtaggactatgaaaggttctgggaaaactatggcaagttcttaaagctgggttgcatggaagacaaggaaaatcacaagagaattgctcctttgctccgattcttttcttctcaaagcaatgaagaattaattagcttggatgaatacgtggaaaatatgaaacctgagcaaaaggacatttactacattgctgcggacagtttgagtagtgcaaaacatgctcctttcctggagaagctcaatgaaaaagagtacgaggtatgtactgtgaatagcttaccatgtttgcagacacatgatcatatttcttaattatattttgctattggattctgggctttattgaatgcattcattgcccatgcaaactttgccctgaaaggcaaatatagtttactggccttcagggcctgttgaatttcatagttgagatgccttatattttcccaaatattggaacaaacatgcttgtttttgctactatctcactgacatctagccatctagaaggcttaagccggagaacccaatggcaaaaacagtgttgcagtactgctgaatggcaaaaacaaagtttctgtatttgtttacatgtcttactgattaatgcttttacccagaaatgagttgattcacttcatcacttgtttcctttttgtgacggttctaacttgtgtatattttgtaggttctatttttagttgacccaatggatgaagtgtctgtcacaaatctgaactcctacaaggataagcgtttcgttgatattagcaaggaagacttggacttaggtatgcatacacaatctttgaaacctccttctactgctgaatgagatgagtttgaaaatagttgttttgccacatgagaattattattgtccttcattatggcaagacttgtttatatttcacccttttaatataatgaatagagccctgtatgtcttgtttatataataaatgtaggcaatgtcttaaccttgcagaattgggacaattacctcatttcagtcgtgtaaatcttttttcctgatttctgattttcatctataatgtaacttaggtgataagaatgaggaaaaagagaaggagatcaagcaggaatacagccaaacatgtgactggatcaagaaacgcttgggtgaaaaggttgctcgagttgatatatcaaaccgtctcagctcatcaccatgtgttctagttgcagctaagtttggttggtctgcgaacatggaaaggttagtctctatcatgttgacctttctagcacataattcttgtaacttaaagttcttaatagtattgttgtgttaacaggttgatgagagcgcaatctatgggtgacatgtcatctctggatttcatgcgttctaggaaagtttttgaaatcaacccagagcatgagatcatcaagggcttgaatgtaagtgttcggtctgctgtttgcacttcgcgcttgtaatttcctgatagtccttatgggttcctttttcctcctcaatgcaggctgcctgcagagccaaccctgatgacccagaagctctaaaggctgtagatatcctgtttgaaacttctatgatctctagtggctttacagtaagtacacctgattgccttcttttccatcaaataaccctggtccatttgatatgataggatattccgccttaccgttgtgcatgttttctatactgaatgtcgtaatctgtttaaatttcatcaatttgtgtcatctcatttgtggtatcatattgcagcctgacaaccctgccgagctaagtgggaagatatatgagatgatgagcacagctatggccagcaagtgggcctcgcacgctcaacccgctgagatgaacctgcagcgagactcacctgtcagctctgagccgattgaagccgaggtgattgagccggagttggtggacgatagccagaagaaataagggaatcgtcgagttttccctcaagttctataaaccttaggttctttttcggatccatttcatacgattatgccgtcctcccagaatattgtagcttaattttgttgccgaaacgctgagatttttttttttcagtttggttgagcggccagtgcaatgagctgtgtgttaaaccaataggattgtgttatgttaggaataatggtttctttgctaggaacaattactttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0514500, RefSeq:Os12g0514500