BGIOSGA005566

From RiceWiki
Revision as of 02:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005566| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005566, complete gene.| tag = OsI_090...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005566

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005566, complete gene.

LocusTag

OsI_09038

Ensembl Transcript ID

BGIOSGA005566-TA

Ensembl Protein ID

BGIOSGA005566-PA

Length

2643

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34150917..34153559

Sequence Coding Region

34153446..34153559,34153134..34153248,34152818..34152960,34152546..34152665,34152352..34152464
,34152159..34152281,34152057..34152097,34151777..34151843,34151505..34151616
,34150917..34151090

Genome Context

<gbrowseImage1> name=IndicaChromosome02:34150917..34153559 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:34150917..34153559 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCTGCCGTTGATGGCCCAAGACAACCTCCGGCTAGGGCGGGGAGCCGCCTCTGCACACGCTGCGGCGAGCGGAAGGCCGCCCTCAAGCGTCCCAAAACCTTAGAGCAGATATGTAGGGAATGCTTCTATGTTGTCTTTGAGGATGAGATCCATCAGACTATTGTTGACAATAATTTGTTTAAACCTGGTGATCGTGTGGCCATTGGAGCTTCTGGTGGAAAAGATTCAACCGTGCTCGCATATGTGCTATCAGAGTTAAATCGTCGTCACAAATATTGCCTTGATTTGTTTCTCTTATCTGTGGATGAAGGAATTACTGGTTATAGAGACGACTCACTAGAAACTGTTAAAAGGAATGAAATACAGTATGGCCTGCCATTGAAAATAGTTTCCTATAAGGACTTCTATGGCTGGACAATGGATGATATTGTGAAAGCAATTGGCCTAAAAAATAACTGTACCTTTTGTGGTGTTTTTCGACGTCAGGCACTGGACCGAGGTGCTGCTCTCTTAAAAGTTGACAAGATTGTGACTGGACATAATGCTGATGACATTGCAGAAACTGTGTTATTGAATATATTACGTGGTGATATTGCACGGTTAAGTAGATGTACCTTTATAACTACTGGTGAAGATGGGCCAATCCCAAGATGCAAGCCTTTCAAATACACCTACGAGAAGGAGATTGTTATATATCCTTACTATGCAATATCCCATATAATGTATGCATATTTCAAAAAGCTGGACTACTTCTCCACAGAATGCATATATTCACCAAATGCATACCGTGGATTTGCTCGCGAATTTATTAAAGATCTGGAAAGGATGAGACCTAGAGCTATACTGGACATCATAAAATCAGGTGAGAATTTTAGGATCTCCACAACAACAAGGATGCCAGAGCAAGGAACATGTGAACGTTGCGGCTACATTTCTAGTCAGAAATTATGCAAAGCATGTGTCTTGCTGGACGGATTGAATCGAGGCTTACCAAAACTAGGCATAGGCAGGACCAAAGGCATTGCTGGAGGTGATGGTGACTGTGAGCAGCAAGCCACACGTTCGGAGAGGAACAGATCGAGTCTGCAAGGAAAACACGGGAACTTCGACTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MDSAVDGPRQPPARAGSRLCTRCGERKAALKRPKTLEQICRECFYVVFEDEIHQTIVDNNLFKPGDRVAIGASGGKDSTVLAYVLSELNRRHKYCLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIVSYKDFYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVIYPYYAISHIMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACVLLDGLNRGLPKLGIGRTKGIAGGDGDCEQQATRSERNRSSLQGKHGNFDF</aaseq>

Gene Sequence

<dnaseqindica>1..114#312..426#600..742#895..1014#1096..1208#1279..1401#1463..1503#1717..1783#1944..2055#2470..2643#ATGGACTCTGCCGTTGATGGCCCAAGACAACCTCCGGCTAGGGCGGGGAGCCGCCTCTGCACACGCTGCGGCGAGCGGAAGGCCGCCCTCAAGCGTCCCAAAACCTTAGAGCAGGTGTGCCTCTATGTCCTTCACATTTTCAATGTAGTTTGTCCTGATGTTTTGAGACAATCCAGGTGCAATGATTTAGCTCTAGTAGCTTAAGATTAACAAGCAGGAATTTTTATATTTTTGTGACAGTAGGGATACTGTGAAATGCGAAACCGTTTTTGTTTGGCAGCTGTAGGTAGTGCTTACACATTTTCTTCTAGATATGTAGGGAATGCTTCTATGTTGTCTTTGAGGATGAGATCCATCAGACTATTGTTGACAATAATTTGTTTAAACCTGGTGATCGTGTGGCCATTGGAGCTTCTGGTGGAAAAGGTATTTCCACACCTGTATGTGCCATCACTAACTAATGAAATAGCATGTGTTCTTTATACAACTCTGACTACTTTCTTTATTCATGTACAGCTATAATCTGCATGCTTCTTTCTTTATTCTGCTCTTGATATTCCAACAGACTCAAATATTTTCACGCCATGACTGTTATGCAGATTCAACCGTGCTCGCATATGTGCTATCAGAGTTAAATCGTCGTCACAAATATTGCCTTGATTTGTTTCTCTTATCTGTGGATGAAGGAATTACTGGTTATAGAGACGACTCACTAGAAACTGTTAAAAGGAATGAAATACAGGTTCCCCTCCCCTCTGCCACCAACACAACAACACCTGTCTGCTGCAGCTTTTGCCTTTTAATATTGGTTCTATTTTTTACAGACATTTAATCACCAACTTTTACCATTTAAATGCATATTCGTCAGTTGCTGATACAACCGACTTATTGCAGTATGGCCTGCCATTGAAAATAGTTTCCTATAAGGACTTCTATGGCTGGACAATGGATGATATTGTGAAAGCAATTGGCCTAAAAAATAACTGTACCTTTTGTGGTGTTTTTCGACGTCAGGTAATTCTTCCTTGCCTCTTTGGTGCATTTTTTGTACTACTTATAGGTTAAGCTTTACTGCCAATCCTTTTTTTTTTGTAGGCACTGGACCGAGGTGCTGCTCTCTTAAAAGTTGACAAGATTGTGACTGGACATAATGCTGATGACATTGCAGAAACTGTGTTATTGAATATATTACGTGGTGATATTGCACGGTTAGTGCTGATCATTCCTTTGTCCTTTTTTTGGGTGGTTGATGTTAATGCTGATTTTCTTTATATATAGGTTAAGTAGATGTACCTTTATAACTACTGGTGAAGATGGGCCAATCCCAAGATGCAAGCCTTTCAAATACACCTACGAGAAGGAGATTGTTATATATCCTTACTATGCAATATCCCATATAATGTGATATTATGCTCTATTCATCAATTGCACTTTTATGTTATTATCCTTGACCTTATGACACGTATGCATATTTCAAAAAGCTGGACTACTTCTCCACAGAATGTAATTTCTTACTCCTTCCTATGTATAGATGTTCAGCAGTCACTGACTAGCATTCTGTAACCAATCATGCTTTTATACACACTAGCAATAATTCTGCTAAAAGAAAAATTCTGCCATACTTGAAGTAATATGCCATGAACTTTTGAGAGTAGTATTATCTTCTACCGACTTTGAGATCAAATCCATTTAACTTTTCTGTATTTCACAATTCAGGCATATATTCACCAAATGCATACCGTGGATTTGCTCGCGAATTTATTAAAGATCTGGAAAGGATGAGGTAAAGGCTTCTGTTGTCCAAAGGAATGATCATTATTTTTACATTTGTGTTTGGTCATTTCTTGGTAATGCTTTGTCATCCAGAAGAGAGAAGCCTATTTCTTCCTTGCTTCTGAAGTTTTTTTTTTAATCTTGAACTTAGTAAATTATGAATGGTGCAGACCTAGAGCTATACTGGACATCATAAAATCAGGTGAGAATTTTAGGATCTCCACAACAACAAGGATGCCAGAGCAAGGAACATGTGAACGTTGCGGCTACATTTCTAGTCAGGTATAGTGATGGTATAATATGTATTACCTGTTGACCTGTTTAGGACATCCTCCTTGCTGATTTACTCAATGAGACTGATGTTAATTAGAGTAAGTGAATAACAGAGGTGCTTTTGCTAAGACATTAGATAGGTTGTCATTTTATTTTCTTTTTGAGGGAAAGGTTATCAGTTCACTCGGTTATACCAGTTTATTTGTGCCGTTACAGTTTGTTTCTTTGAATTGTCTGAATAATGCACCCACATGATAGTTCAATCCATTTTGTGCATTCCATGAACTGAACTGAGGCCCTCTGCATTGTGCTCACTCATTTAAGAAACCTGGAACCTGTTAGCTAATGATGTGATTGGCATGAATTCCCCTGATTTCCAATGCTTTTACTGAACTGAACATCGTTGAAATTCTGGCCTTGTAGAAATTATGCAAAGCATGTGTCTTGCTGGACGGATTGAATCGAGGCTTACCAAAACTAGGCATAGGCAGGACCAAAGGCATTGCTGGAGGTGATGGTGACTGTGAGCAGCAAGCCACACGTTCGGAGAGGAACAGATCGAGTCTGCAAGGAAAACACGGGAACTTCGACTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005566

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005566&oldid=59118"