BGIOSGA005572

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Revision as of 02:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005572| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005572, complete gene.| tag = P0486G0...")
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Gene Name

BGIOSGA005572

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005572, complete gene.

LocusTag

P0486G03.7

Ensembl Transcript ID

BGIOSGA005572-TA

Ensembl Protein ID

BGIOSGA005572-PA

Length

8614

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34117718..34126331

Sequence Coding Region

34126169..34126331,34125981..34126078,34125754..34125895,34119122..34119217,34118893..34119012
,34118477..34118739,34117718..34117828

Genome Context

<gbrowseImage1> name=IndicaChromosome02:34117718..34126331 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:34117718..34126331 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGGGGCGTAGCGCGCGCGGCGTCGTTCGGTGGCCGCGCCGCGACCGCGAGGTGGTGCTCGTACCGGCGCATCACGGTAGCCGTCTGCCTCGGGAACCTCGTCGCCGCGCTCCTCGTGCTCCGCTCCCTCACCTCCCTCGCCCCCACACCGCCCAAACGTGAGGAAGTGGTGGAGTATACGGAGGAGCAGATTAGGAAGGCGGAGGAGTCGATCCGGATTCGCCGCGAGGCGGAGCCCGTCGAGCTTGTCGAGGCGGTGAAGAATCTGCGGAAGATTTTCAGGCGGGAGGAGAAGAGGCGGAAGGAGTTGCCACTGGAGTTGAAGCAGAAGGTCTCGTATGAGATTGTGCAGCTCCTGCTCGATTTGGGGGATAACAGCAGTTTCGCTCAGCAACTAGAAGCAGTGGAATCATGGCGTTTCGAGAAGTTAAAAGATATAAAAAGTGCATCTATTCAGAACTCAACAAAGTTAGACCTCTCCAACGAGGAAGCAAGAACCTTAAAGCGAGCACTACAGTTCAACTGGCATGTGCTGCTGGAAGACATTGGTCTTTGGATACCATCAGAAGTCTCACACACTGAACATGATGACAAACCTGAGAATGAACCAGAAGAAGAAGAGATAATAGCTGGTCCACCTTTGCCCTCACAATGCAATGCTGAGCTACATACTGATTACGATGGTGCTGCTGTTAGATGGGGCTTAACACACCCCAAAGAATCTGCTGCCGATTGCTGTCAAGCATGTCTAGACCAGGCTAAGAATGCCAGGCCAGGTGAACTAAGGTGTAATATATGGGTTTATTGCCCATCAGAGTTTGGATGTTTCTCTCCAGATAAATATGAGCATAAACATCAGGAGTGCTGGTTGAAACAGGCTGACCACCCTAAACTCAACTTCAAAGACAAGTATTCCGAGTCATACAGAGATTCTCATCCCACTGCCCCTGTCGTTGTGCCCTGGATGTCTGGTGTCATCAGCGCATGA</cdnaseq>

Protein Sequence

<aaseq>MARGVARAASFGGRAATARWCSYRRITVAVCLGNLVAALLVLRSLTSLAPTPPKREEVVEYTEEQIRKAEESIRIRREAEPVELVEAVKNLRKIFRREEKRRKELPLELKQKVSYEIVQLLLDLGDNSSFAQQLEAVESWRFEKLKDIKSASIQNSTKLDLSNEEARTLKRALQFNWHVLLEDIGLWIPSEVSHTEHDDKPENEPEEEEIIAGPPLPSQCNAELHTDYDGAAVRWGLTHPKESAADCCQACLDQAKNARPGELRCNIWVYCPSEFGCFSPDKYEHKHQECWLKQADHPKLNFKDKYSESYRDSHPTAPVVVPWMSGVISA</aaseq>

Gene Sequence

<dnaseqindica>1..163#254..351#437..578#7115..7210#7320..7439#7593..7855#8504..8614#ATGGCGAGGGGCGTAGCGCGCGCGGCGTCGTTCGGTGGCCGCGCCGCGACCGCGAGGTGGTGCTCGTACCGGCGCATCACGGTAGCCGTCTGCCTCGGGAACCTCGTCGCCGCGCTCCTCGTGCTCCGCTCCCTCACCTCCCTCGCCCCCACACCGCCCAAACGTGAGCTGAATCTCGCGTCGCCATCTCTGCACCTTGGTCCTTGGGTTTATTCGATCTGATTCGTGCGCTGTATCGAACTCTTGTTTCTAGGTGAGGAAGTGGTGGAGTATACGGAGGAGCAGATTAGGAAGGCGGAGGAGTCGATCCGGATTCGCCGCGAGGCGGAGCCCGTCGAGCTTGTCGAGGCGGTATTAACCAGAAATCTTGTTGTAAAATATTTTCACAATACTTGTGATCTAATCGACTAATCCTCGAAAGCTTTTGGTGCCAAAGGTGAAGAATCTGCGGAAGATTTTCAGGCGGGAGGAGAAGAGGCGGAAGGAGTTGCCACTGGAGTTGAAGCAGAAGGTCTCGTATGAGATTGTGCAGCTCCTGCTCGATTTGGGGGATAACAGCAGTTTCGCTCAGCAACTAGGTATTCTCACATTCTCGTATCTGGTTGGTTTCAAATCAGGAAATAGTACACTGTTTTATGTACAACGGAATGGCATGTTAGATTCGGAATTTGAATACCCTTTTCTTAGTACGTGTGGCGTTATTTGGAATCATGTGTTAATCTTATCTAGTTTTTGTCTGGCAAGTTGACTTGCAATGTGGGCCTATTTCAGTATTTTATAATCACTTCATTTGAGGTACTCCGGAGGGCTGAACAGGATGTTACTTCTTTATTTGTGATCCTGTGCACTCATCAGTTCATCTGCTCTCTTGCAAGTGTCATCTTATTTAGTTGCATTTTCTCAATCCACATGTTATAAAATAAACTTTTTTGCACGTGATTTTCCCATGGTGTATCAACACAAAAGTGGTTCCAGCTACCTTGATAGGCTCAATGACGCATTCAACACATTATGTATGAGTTGACCTATTTGACGCAAGAAAAGAAAGAGATATTACCGATTTCTATTTGACGCAGTAATGTGGAATGCAGATGGTTAGGAGTGATGGATAAGTCTTTGTGGTCCTTGGTCCTGATTTCTTCTTTTTGCTTTTGGGTAGTTTCACCTTTTTCAGGACATCATCTACTCCTTTAGCATATTTTTCAGTTGCTAGAACAGCTGCAGTTAGTAGGACAATAGCAATTAGCATCTCCTTTATGCCTCCTTTATGCTTTATTCAGTTTGGATGCCCTCTAGGACAGCATCCTATTCAAATTTCGAATTTTTAGACTAGGAGGGTGCAGCAATAGGCTTGCAGCCAGCTATGGTTATATATATGTATCCAACCTCCCTCGGGAAGGTATGGCTTTGTGTTTTGTGAATGAAGAAAACCAGAAAATTGCCCCATCTCGAGTGCCATCCTCTTCTCAATGAGAGTAATCATTGAAGTTCTAACATCTGGTATCAGAGCCACACTTTCCTGTAGGCTAAACATCTCTTGTTCCACCCCTTCCCAAGCTCGGTTGAGCTCTCAGCCAACAGCAGCACCGGCTGCTCCTCCTTCCCCTTTCCCTCCCCCTCTCCACGCAGCAGCCCCCCGGAGGTGCGCCATTTCCGACGTTCGGTCGCCTCGAGCACTCGGCGTCAGCAGGACGCCGAGCTCGCCGCAGCAGAAGAGCGCAGGCGAGCAACGGCTCAGACCGCTGCAGCAGCAGCGAGGGCGGCCAGACTGGCGGCAGCGGAGTTGGCAGCAGCTAGGGCGGAGGCGGAAGCAGAGGCGGCGGAAGATGCGGCACGTGCGGCGGAGGTAGAGGTTGAGACCTTGCGCAGCAGCATCAACGGCTCCATCGCCGGCGACATCACCGCCGACAGGGAGCTTGAGGAGCTAGCAAGAGGAAGGGCACGGGAGCGGGCAGAGCGGTGGGCAGCAGCCCACCTCCACGGCAGCGGCGGCGGCCAAAGGGACCGTGCACCCGCTGACGGGAACCCAGACGGGCGCGGGCGTGTCGGCGGCAGCACGGAGCCCGCGCGCGGCCCTCGCAGGCAGCGTGACTCTCTCTCCCTTGACCGGCGCCATGGCCACCACGGCGTCCAGACGGTGGTCAGGGACTTTGGTCCCGGCGGTGGATGGCCTACCCTCACCAAAACCAACTACATCGAGTGGGCCGCGGTGATGAGGGTGAGGCTCCAGGTGCGGCACATGTGGGAGGCAGTCCGGTACAGCGACGTCGACTACGACGAGGATCGGCGGGCACTGGATGCCCTCATCGCTACAGTCCCGCCCGAGATGCAGTTCTCGCTTTCCCAGAAGCGGACTGCCAAGGAGGCCTGGGATGCCATCGCTGCGGCACGCATCGGCAGTGACCGCGCCCGCAAGTCCACATTGCAGGCACTCCGCAAGGAGTGGGAGAACCTGGCCTTCAAGCCAGGTTAGGATGACTTTGCCCTCCATCTCAACACTCTCTTGTAGAAGATGGTGCAGTACGGCGACGACACCTACGACGAGGAGAGAGCTGTCGAGAAGCTCTTCCGCTGCGTTCCAGAGAAGTACAGGCAGATCGCTCGCTCGATCGAGTCTCTGCTAGACCTCTCCACGATGTCGATCGAGGAGGCGTTAGGTCGCCTCAAGGTCGTCGACGGTGATGAGCCACAGCCTCTCTCGGGGCCTATCACCATTGGCGGGAAGCTCCATCTCACTCGGGACCAGTGGGAGGCCTCTCAGGGTGACGGGAGGAAGGGGGAGTCATCTTCCCCGACAGGCGGCCGTAAGTTGTGCAAGGTGCGGGGAGGTGTCCAGCTACGGTGGGCACGAAGACGTGCCGAGGGTGGCGCCCGCAGAGGCGCCCAAGGCGGCGCCACCGGCAACCACAAGCCGGCACGAGACGATGCCTGCCGCAACTGTGGCAAGCTTGGCCATTGGGCCAAAGACTGTCGACAGCCACAACGCGGCCAGGCCCACATCGCATGGGTGGAGGAGGAAGAGCCGGCTCTGCTCCTGGCTCACGCAAGCATCGAGCTACCTCCAACGGCACCGGCCGCAGCGGTTTTTCTCCACCTTGATGAGCCGAAGGTACTCGTCTCCCTCTGCAACGGCTCCAGCAACGACAAGGCTGATGGGTGGTACCTCGACACCGGCCCCACCCATCACATGACCGGCCGACGGGAGTTCTTTACCGAGTTCGACTCCAGCGTCCGAGGCTCCGTCAAGTTTGGGGACGCCTCCGGCGTGGAGATCAAGGGCGTTGGCTCCGTCACCTTCACCGCCAAGTCCGGTGAGCACAGGTTGCTCACCGGAGTCTACTACATCCCCGCGTTGAGGAATTCTATCATCAGCGTGGGACAGCTGGATGAGAACGGCTCACGCGTGTTGGTCGAGGACGGTCTCATGAGGATTTGGGATCGCCGTCGTCGCCTTCTTGCCAAGGTAACTAGAGGCACTAATCGACTCTACATCCTCAGCGCGCAGGTTGCACAACCAGTTTGCCTCGCCGCTCGTCGAGACGATGAGGCGTGGCAGTGGCACGAGCGCTTCGGGCACCTCCACTTCGAGGCCTTGAAGTGGCTCAATGCCAAGGAGATGGTGCGAGGCATGCCGTGCCTTGACCACGTGGAGCAACTCTGCGACGTCTGCGTGGTAATGAAGCAACGGCGACTCCCCTTTCCCCAGCAGACGAGCTTCCGAGCCAAGGAGCGGCTCGAGCTCGTGCACGGGGACTTGTGTGGCCCAGTGACACCGGCCACACCAAGAGGACGACGTTACTTCCTGCTGCTCGTCGACGACCTCTCCCGCTACATGTGGGTGATGGTCCTCGACAGCAAGGGAGAGGCTGCGGACGCCATCAGGCGCGCGCAGGCTGCTGCAGAGGCGGAGTGTGGCCGCAAGCTGCGCGTGCTGCGCACCGACAACGGCGGCGAATTCATGGCGGCTGAATTTGCGTCGTACTGCGCTGATGAGGGCATTCAGCGCCACTACACCGCGCCGTACAGCCCGCAGCAGAACGACGTCGTCGAGCGGCGCAACCAGACGGTGGTGGGGATGGCTCGGGCTCTCCTCAAGCAGAGGGGGATGCCGGCCATCTTCTAGGGAGAGGCGGTGGTGACGGCCGTCTATATCCTCAACCGCTCTCCTACCAAGACCCTCGATGGCAGGACACCGTACGAGGCATGGCATGGGCGCAAGCCGGCGGTCTCCCACCTGCGGGTCTTCGGCTACCTCGCGTTCGCCAAGGAGCTTGGCCACATCGGCAAGCTCGACGACAGGAGCACCCCAGGGGTGTTCATCGGCTACGCGGAGGGCTCGAAGGCCTACCGCATCCTCGACCCGGAGACACATCGTGTGCGCACAGCGCGCGACGTAGTGTTCGACGAAGGGCGAGGGTGGGTATGGGACAAGGCGGTGGACGATGGTTCGACTCCGACGTACGACGACTTCACCATCGAGTACGTCCACTTCGAGGGAGCTGGGGGAGTAGGCAGCTCTTCTTCACCGAGCGTGTCTACCCCAGTCCCCGAGCCTCCACCGACTCCGACATCAACACATCCTCGGGCCACGACTTCGACTACGACGAGCTCTTCGCCGACACCACCCCAGCCGGTGACCCCACGCGCTCCAGCACCAACAGCCACTCCTCCAGGCACGTATACTCCGACGCCAACTCGTGTTGAGCGCAGCCCGGTGGAGTTCGCTACTCCGCTCTCCCACGACGGGGAGCGCATCGACGCATACCACGACGGCGAGCAGCTACGGTACCGTACGATGGAGGATCTTCTCGGCGACCAGCCGGTGCCGGGACTGGTGCCTCGCGACCTGGAGGCGCAGTTGCACCTTGCGTGCGACGACGGTGAGCCTCGGTCTTTCGCAGAGGCCGAGAAACACGCGGCATGGCGTGTCGCGATGCAGTCGGAGATGGACGCGGTTCAGGAGAACCGCACCTGGGAGCTTGTTGACCTCCCTCGTGGTCACCGCATGATCACCCTTAAGTGGGTGTTCAAGCTGAAGAGGGATGAAGCCGGAGCCATCGTCAAGCACAAGGCTCGCTTGGTGGCACGCGGTTTCGTGCAGCAAGAGGGGATCGACTACGACGATGCCTTCGCTCCCGTGGCACGGATGGAGTCCGTGCGACTCCTTGCGCTGGCTACTCATGAAGGCTGGGGCGTCCATCACATGGACGTCAAGTCGGCGTTTCTGAACGGCGACTTGAAGGAGGAGGTCTACGTGCACCAGCCGCCGGGATTTGTGATCCCTGGCAAGGAGGGCAAAGTGCTACGCTTGCACAAGGCCCTCTATGGCTTGCGGCAGGCACCGAGGGCGTGGAATGCCAAGTTGGATTCCACACTCAAGGGGATGGGCTTCGAGCAAAGCCCGCACGAGGCGGCCATCTACCGGCGGGGCAATGGAGGAAATGCCTTGCTGGTGGGTGTCTACGTCGACGACTTGGTGATCACCGGCACCAAGGATGCGGAGGTCGCGGCGTTCAAAGAGGAGATGAAGGCCACCTTCCAGATGAGTGATCTGGGGCCTCTCTCCTTCTACCTGGGGATCGAGGTGCACCAGGACGACTCCGGGATCACGCTTTGACAGACCGCCTACGCCAAGCGCGTTGTTGAGCTGGCTGGGCTCACCGATTGCAACTCAGCTCTCACTCCGATGGAGGAGAGACTGAAGCTGAGCCGCGATAGCACGACGGAGGAAGTGGATGCTACACAGTACCGGCGTCTTGTGGGGAGCCTTCGCTACCTCACCCACACACGGCCGGACTTGGCCTTCTCCGTCGGCTACGTCAGTCGGTTCATGCAGCGACCGACGACGGAGCACCAGCAGGCTGTGAAGAGGATCATCCGCTACGTTGCGGGGACTCTCGACCACGGTCTCTACTACCCGAGGTGTGCTGGCAAGGCACACTTCATCGGGTACAGCGACAGCGACCACGCCGGCGACATCGACACCAGCAAGAGCACGAGCGGGATTCTCTTCTTCCTCGGCGAGTGCCTCGTGAGCTAGCAGTCGGTCAAGCAGCAGGTGGTGGCCCTGTCCAGCTGCGAGGCCGAGTACATGGCGGCCTCCGCCGCTTCGACCCAGGCGCTCTGGCTTGCTCGACTGCTTAGTGATCTCCTCGGCAGAGACACTGGAGCGGTGGAGCTCAGGGTGGATAGCAAGTCCGCTCTGGCCTTGGCAAAGAACCCCGTTTTTCACGAATGGAGCAAGCACATCCGGGTGAGGTACCACTTCATCCGAAGCTACTTGGAGGAAGGGAGCATCAAAGCGAGCTACATCAACACCAAGGACCAGCTTGCGGACTTGCTCACCAAGCCTCTTGGGAGGATCAAGTTCCTCGAGCTCTGTTCCAGGATCGGGATGGCCCAACTTCCCCACAAGACGATGCACAAGACTTATGGGGAGAATGATGGATAAGTCTTTGTGGTCCTTGGTCCTGATTTCTTCTTTTTGCTTTTGGGTAGTTTCACCTTTTTCAGGACAGCATCTACTCCTTTAGCATATTTTCAGTTGCTAGGACAGCTGCAGTTAGTAGGACAGCAACAATTAGCATCTCCTTTATGCCTCCTTTATGATTTATTCAGTTTGGATGCCCTCTAGGACAACATCCCATTCAAATTTCGAATTTTTAGACTAGGAGGGTGCAGCAATAGGCTTGCAGCCAGCTATGGTTATATATATGTATCCAACCTCTCTCGGGAAGGTATGGCTTTGTGTTTTGTGAATGAAGAAAATCAGAAAATTGCCCCATCTCGAGTGCCATCCTCTTCTCAATGAGAGTAACCATTGAAGTTCTAACAAGGAGAGGGCTCTGGTGTATTGCACGATAATACCGACTATTATAACAGTTTGCCATAATTTATTTGCCTAATATTTCCTACAAGTTCCAAAGCTAACAGTATCACAGCAGAACTGAACCTCGTTTTTGGTTTGCATTCCAATTGTTTTGCTTCTTGCCACAACATGCAAGATACATATTTCTATACTAACTTATTAAGTAGCCTTCTACAAATTATTAAGATATTTTCTTGATTTTTCATATTGGAGTACCTACATCTATTTTTTCCTAATACATAACAGAAGCAGTGGAATCATGGCGTTTCGAGAAGTTAAAAGATATAAAAAGTGCATCTATTCAGAACTCAACAAAGTTAGACCTCTCCAACGAGGAAGCAAGTACGTGGGCTTTTCTATCGAATCTACTATTCTGTGTGCTCGTATTCTTTTCTGATTAGTGATGCTAGGCCTTTGGCTATATACACTGAATTTCAATATTTTCCTGTAGGAACCTTAAAGCGAGCACTACAGTTCAACTGGCATGTGCTGCTGGAAGACATTGGTCTTTGGATACCATCAGAAGTCTCACACACTGAACATGATGACAAACCTGAGAATGAACCAGAAGGTCTCTTTTTTGTGTTTATTTATGAAGTTCAGAGCATTCATGGCCTCAGTTCAAACAATTGTGTCCTTTTTACCTTTGTAGTTGTAGTTATAGACTATATTTTGAAGTTCTCAAAATGAGATTTTAGTTTCCAACCTATGTTAATTGTTGCAGAAGAAGAGATAATAGCTGGTCCACCTTTGCCCTCACAATGCAATGCTGAGCTACATACTGATTACGATGGTGCTGCTGTTAGATGGGGCTTAACACACCCCAAAGAATCTGCTGCCGATTGCTGTCAAGCATGTCTAGACCAGGCTAAGAATGCCAGGCCAGGTGAACTAAGGTGTAATATATGGGTTTATTGCCCATCAGAGTTTGGATGTTTCTCTCCAGATAAATATGAGCATAAACATCAGGAGTGCTGGTTGAAACAGGTATACTCAGTTTTGTTCTATATTTATGCACCAACCATTGAAATTACAGCCCTTAATATTTGCATCTTTATTGTTTTCAGTTTAAATGAGTGTTAGAACCCCAGTTTTTTTTATGCATTTTACATGTGCACGAGATGGCTTGCTGTTTAGTTACTATATAGAAATGATTTGGAAAATATTTATGCCTTAAGCACGGCCCTTTGATTACCATTTAGTAGTAGTAAAGGATTTGAATGGCAGAAGTCAGATACAAGGTGGTGCTGGTGTTCATATTGCTATTCTGCAAGTCTGTATGCTTGTGCATTTGTCATATTATGGATTTGTTCACTGATCTGCACCAGCCTCATGTTTGATACTTTACAAAAAAATATTGAGATTTAATTTGCCGCAAAAAAATAATTTAATATGAGCTAGTATCAAATTATCCTGCATAATTCTGACCCATGTACTGTTTTGAAGGAATTGGTTGCTCATTGCACTTGTTAGTCTTCAGAAATCCAAGTTTGTAATGAATTTTGTGTTTCTTCGCCATAGGTTTGTTTTGTAAGCTAAAATACTTAATGAAACACCTGGGCATTGTTTACTGTAGTGTCTGAGAGTGTCATGAAATGGTTTATTTCTTTTCTTATGATGGTTCAATGCTTGCAGGCTGACCACCCTAAACTCAACTTCAAAGACAAGTATTCCGAGTCATACAGAGATTCTCATCCCACTGCCCCTGTCGTTGTGCCCTGGATGTCTGGTGTCATCAGCGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005572