Os12g0515300

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0515300| Description = Similar to R2R3-MYB transcription factor| Version = NM_001190051.1 GI:297729232 GeneID:9272333| Length = 2976 bp| D...")
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Gene Name

Os12g0515300

Description

Similar to R2R3-MYB transcription factor

Version

NM_001190051.1 GI:297729232 GeneID:9272333

Length

2976 bp

Definition

Oryza sativa Japonica Group Os12g0515300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20136191..20139166

Sequence Coding Region

20136191..20137091,20138838..20139166

Expression

GEO Profiles:Os12g0515300

Genome Context

<gbrowseImage1> name=NC_008405:20136191..20139166 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:20136191..20139166 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaagccggattgcggcggcgggggaggggcggcgaagggcggcggcgttctgggtgtggcgggagggaacaatgcggcggtggtgggggggaaggttcggaaggggctgtggtcgccggaggaggacgagaagctggtggcgtacatgctgcggagcgggcaggggtcgtggagcgacgtggcgaggaacgccgggctgcagcgctgcggcaagagctgccgcctccggtggatcaactacctccgccccgacctcaagcgcggcgccttctcgccgcaggaggaggacctcatcgtcaacctccacgccatcctcggcaacaggtggtctcagatcgctgcccggctaccggggcgcaccgacaacgagatcaagaacttctggaactccaccatcaagaagcgcctcaagatctcctcctcctcggcgtctccggccaccaccaccgactgcgcctccccgccggagcacaagctcggcgccgtcgtcgacctcgccggcggcggcggcgccacggacgacgtcgttgtcgggacagctaatgctgccatgaagagcatgtgggtggattcctcgtcgtcgtcgtcgtcgtcttcctcgtcgatgcagagccggccgtcgataatggcggcggcggcggcggggaggagctacggcggcctcctcccactccccgaccaggtctgcggcgtcgacacctcgccgccaccgccgttcttccacgaccactccatctccatcaagcaagcatactacggatcaaccggcgcccaccaccaccaccacgcgatcgccaccatggacggatcaagcttaataggagatcatcaccatcacagcagcagcatcctctttggcggcgcatcagtgccacctctcctagaccaccaaaccattctcgacgacgacgacgaccaccctaacaaaaccggcagcaacacgaccgcggccacactgagcagcaacatcacagacaacagcaacagcaacaagaacaacagtgataataacaacaacatcagcagcagctgctgcattagcctaatgaacagcagcagcaacatgatctattgggagggtcaccaccaacaacagcagcagcagcatcagatgctgcagcagcagcagcagcacatgagcaggaatgtcatgggagagtgggacttggaggagctgatgaaagatgtgtcatccttgcctttccttgatttccaagttgaatga</cdnaseq>

Protein Sequence

<aaseq>MRKPDCGGGGGAAKGGGVLGVAGGNNAAVVGGKVRKGLWSPEED EKLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIVN LHAILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKISSSSASPATTTDCASPPEHK LGAVVDLAGGGGATDDVVVGTANAAMKSMWVDSSSSSSSSSSSMQSRPSIMAAAAAGR SYGGLLPLPDQVCGVDTSPPPPFFHDHSISIKQAYYGSTGAHHHHHAIATMDGSSLIG DHHHHSSSILFGGASVPPLLDHQTILDDDDDHPNKTGSNTTAATLSSNITDNSNSNKN NSDNNNNISSSCCISLMNSSSNMIYWEGHHQQQQQQHQMLQQQQQHMSRNVMGEWDLE ELMKDVSSLPFLDFQVE</aaseq>

Gene Sequence

<dnaseqindica>2076..2976#1..329#atgaggaagccggattgcggcggcgggggaggggcggcgaagggcggcggcgttctgggtgtggcgggagggaacaatgcggcggtggtgggggggaaggttcggaaggggctgtggtcgccggaggaggacgagaagctggtggcgtacatgctgcggagcgggcaggggtcgtggagcgacgtggcgaggaacgccgggctgcagcgctgcggcaagagctgccgcctccggtggatcaactacctccgccccgacctcaagcgcggcgccttctcgccgcaggaggaggacctcatcgtcaacctccacgccatcctcggcaacaggtgcagctaatcagttaactataagctcctacgactaagtagtacctaattaattaattaccatgattaattaagctttaatatattaggagattgattcattaattacttcattgtctttgtaatgtgggggttcatattgtgtgttcttctttgttcgttcgtttctcatcggtttttcttaagtagtttgcttgtcttcttcctacattaatttgtttcttgtttttcacaaagtgctagctttttctgtgtgtgtttaatttgttttgttttctcgtttggaatgttgttatattgtgttgatagggctagcaagtaatgtagcataatctttcaatgaatttccctcgcaattaaaagatatatatactgttctttttttaaaaaaaaatctctctctgggtgtgtattaattgttttcctctggtttctcttttttttttgagatggtgttgattttgtttataattctctgtggtgctctgatctacacatgcatttctccaaaaaaaaagtatataagagattacgtgaatttgacacaatacgtcgtacgatatttttttcccatgtacactgtcctagttcacaactgtcttaggtagatctaccgtgagcgtacaatttccgtattctacagctgaagcattacagatcacgtacagcaaaacgttgacgtgcatatactcatgcatgcatatacatttataatatgtgacataagttaaaaaaatttgattattagaatattaatatatatacagacatgtgtctcaagtctcaaagggctatgagaacaacatgagtcctggatatatcaatcaaaatatttcttgattaattcttttttttcttctgcttaattttgcatgaaatgtcgtacaccatgcataattacaaaactgatatatatgtaacgtagaaactaaaagttgcctgaaaagacaccgaaagggatacttcatacttgtatacgttctaattaaccctgaaagacatatgcaaatttgtcggatccaatcatccataattattgattaatccttgtcttaccagaaatgagattatgacatcgactaattacctctacgtactttctcacatgtaaaactaacctatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgcttttcgttttacctaaaaaaaccttttcattttagctttgtataaagtcaaatattcatcataaattttcaaaaattcgtatacagtttaacatgtgaattatatattatgaaaatatttctcatatataatgaatttagaaaataaatcttattatggtaataactgtataaatttctagagaattgatgatgaaggttagaaatgtttgacttactgcaaagttataacgacaagtaatttttttaagtaaaacaacaagtaatttgaaacggagaaaatcatatatattttatctttatttttttttggaagtaaatactagattaatcatgcttatgcgcttatgcatgcatgcatgcatgcataaaaagaagattaattaaggcgcattgacatatatgtgcatgcagctaattaacctttttatttaattaatcttttgtactacaaccatagctatagctaagcttggataataattcttgacagaaacatctcgtttgctcactgatgaaaaatctaccgtactacgacgcatggaattattgcaggtggtctcagatcgctgcccggctaccggggcgcaccgacaacgagatcaagaacttctggaactccaccatcaagaagcgcctcaagatctcctcctcctcggcgtctccggccaccaccaccgactgcgcctccccgccggagcacaagctcggcgccgtcgtcgacctcgccggcggcggcggcgccacggacgacgtcgttgtcgggacagctaatgctgccatgaagagcatgtgggtggattcctcgtcgtcgtcgtcgtcgtcttcctcgtcgatgcagagccggccgtcgataatggcggcggcggcggcggggaggagctacggcggcctcctcccactccccgaccaggtctgcggcgtcgacacctcgccgccaccgccgttcttccacgaccactccatctccatcaagcaagcatactacggatcaaccggcgcccaccaccaccaccacgcgatcgccaccatggacggatcaagcttaataggagatcatcaccatcacagcagcagcatcctctttggcggcgcatcagtgccacctctcctagaccaccaaaccattctcgacgacgacgacgaccaccctaacaaaaccggcagcaacacgaccgcggccacactgagcagcaacatcacagacaacagcaacagcaacaagaacaacagtgataataacaacaacatcagcagcagctgctgcattagcctaatgaacagcagcagcaacatgatctattgggagggtcaccaccaacaacagcagcagcagcatcagatgctgcagcagcagcagcagcacatgagcaggaatgtcatgggagagtgggacttggaggagctgatgaaagatgtgtcatccttgcctttccttgatttccaagttgaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0515300, RefSeq:Os12g0515300