BGIOSGA005599

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Revision as of 02:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005599| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005599, complete gene.| tag = P0627E0...")
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Gene Name

BGIOSGA005599

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005599, complete gene.

LocusTag

P0627E03.21

Ensembl Transcript ID

BGIOSGA005599-TA

Ensembl Protein ID

BGIOSGA005599-PA

Length

4698

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33808975..33813672

Sequence Coding Region

33813044..33813672,33812825..33812954,33811469..33811709,33810877..33811099,33810592..33810755
,33810179..33810482,33809730..33809868,33808975..33809127

Genome Context

<gbrowseImage1> name=IndicaChromosome02:33808975..33813672 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:33808975..33813672 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCGGGCGCTGTACCGGGGGGCGTCGGGGATCGGCGGCAAGCCGGCGGCGGGGTATGACGCGGCCGACGAGGCGCGGTACGACCCCAAGGAGCCCAGCGAGAACGGCATTGGCGGCGCCGGCGGGAGGGGGAGGAAGCGGCACCTCGCGGTGGCGGCGGTTAAGATCGGGGTCCTCGTGCTCGCGGCGGCCGCGCTCGTGGGGTCGGTGGCGTGGGCGGGGTCGCTGTACGCCGGGCGAGGGGCTGCCGCGGCTGCGGCCGCGGCCGCCGCCAGCCGTGGGTACCGCCGGCTGCAGGAGCAGCTGGTCACGGACCTGCTCGACATCGGCGAGCTCGCCGGCGGCGGGGTCCGCGCGCGGGAGGCGGAGGTGTGCGTTCCTGAGTACGAGAACTACGTGCCGTGCTACTACAACGTGTCCGACACCGTCGACGTAGCGGATCTGGGCGGTGGCGTCGTGATAAGCTACGAGCGGCAGTGCTCGCGCGAGGGCAAAATCGCGTGCCTCGTCGCGCCGCCACGGAGCTACCGGATCCCCGTGCGGTGGCCGAGTGGCAAGGGGTTCATCTGGAAAGACAACGTGCGGATTAGCGGGCAGGAGTTCTCGTCGGGGAGCCTGTTCAAGAGGATGATGGTGGAGGAGGACCAGATCTCATTCCCATCGGACGCACATATGGCTGATGGTGTGGAGGATTACGCACATCAGATTGCAGAGATGATTGGTCTGCGGAACGAGTTCAATTTCAATGAGGCCGGGGTTAGGACAGTTCTTGATATAGAATGTGGATTTGGTACCTTGGGAGCACACCTTTTTCAGAGAGATCTCTTGACCATGTGCATTGCTAACTATGAGGCGTCAGGCAGTCAAGTGCAAATAACACTAGAGAGAGGAATCCCTGCAATGATTGGTTCATTTGCATCGAAACAGCTTCCATATCCCTATCTTTCTTTTGATATGGTGCATTGTGCAAAATGCAATATTGAATGGGACAAAAATGATGGTGGTTTCTTGGTTGAAGTGGATAGATTATTAAGGCCCAGTGGATACTTTGTGTGGACATCAAGTCTGAATACACACAGGGCTTTGCGTGACAAAGAAAATCAAAAGAAGTGGAGAACCATTCGCGACTTTGCCGATAGCCTCTGTTGGGAGATGTTGTCACAACAAGATGAGACAATTGTGTGGAAAAAGACAAATAAATTGGATTGCTACAGTTCAAGGAAATCAGGCCCTGTGCTTTGTACTCATGATCCAGAATCACCATATTACCAACCACTAAATCCCTGCATAGCAGGAACAAGAAGTCAGCGATGGATTTCCATTGAACATCGCACTACATGGCCTTCTCAGTCTAGGTTGAACTCAACAGAACTTGATATACATGGGGTGCATTCAGAAGACTTTGCCGAGAATACTGCAAACTGGGACTCAATGGTGCGAAACTACTGGTCTTTGCTGTCTCCTCTTATATTTTCTGATCATCCAAAGAGACCCGGTGATGAGGACCCACAACCACCATTTAACATGCTAAGGAATGTTCTAGACATGAATGCTCACTTCGGTGGATTTAATGCTGCTTTACTTAAGGCTGGAAAATCTGTATGGGTGATGAATGTTGTTCCTACAAATGCTCCAAACTATCTGCCGCTAATTTTTGATCGTGGTTTTATTGGGGTTCAACATGACTGGTGTGAAGCATTTCCAACTTATCCAAGAACATATGATATGGTCCATGCTGATGGCTTTCTATCACTTGAGAAGCACCAAAAGCATAGATGTTCTACTCTTGATATATTCTTGGAAGTTGATCGCATCCTACGTCCAGAGGGTTGGGTTATAATCCGTGACACTGCCCCTCTTATTGAAGCTGCAAGATCTGTTGTAACACAGCTCAGGTGGGATGCCCGTATTTTGGATCTTGACATAGCTAGTGATGAAAAACTTCTGGTCTGTCAGAAGCCATTTATTAGAAAACAATGA</cdnaseq>

Protein Sequence

<aaseq>MSRALYRGASGIGGKPAAGYDAADEARYDPKEPSENGIGGAGGRGRKRHLAVAAVKIGVLVLAAAALVGSVAWAGSLYAGRGAAAAAAAAAASRGYRRLQEQLVTDLLDIGELAGGGVRAREAEVCVPEYENYVPCYYNVSDTVDVADLGGGVVISYERQCSREGKIACLVAPPRSYRIPVRWPSGKGFIWKDNVRISGQEFSSGSLFKRMMVEEDQISFPSDAHMADGVEDYAHQIAEMIGLRNEFNFNEAGVRTVLDIECGFGTLGAHLFQRDLLTMCIANYEASGSQVQITLERGIPAMIGSFASKQLPYPYLSFDMVHCAKCNIEWDKNDGGFLVEVDRLLRPSGYFVWTSSLNTHRALRDKENQKKWRTIRDFADSLCWEMLSQQDETIVWKKTNKLDCYSSRKSGPVLCTHDPESPYYQPLNPCIAGTRSQRWISIEHRTTWPSQSRLNSTELDIHGVHSEDFAENTANWDSMVRNYWSLLSPLIFSDHPKRPGDEDPQPPFNMLRNVLDMNAHFGGFNAALLKAGKSVWVMNVVPTNAPNYLPLIFDRGFIGVQHDWCEAFPTYPRTYDMVHADGFLSLEKHQKHRCSTLDIFLEVDRILRPEGWVIIRDTAPLIEAARSVVTQLRWDARILDLDIASDEKLLVCQKPFIRKQ</aaseq>

Gene Sequence

<dnaseqindica>1..629#719..848#1964..2204#2574..2796#2918..3081#3191..3494#3805..3943#4546..4698#ATGTCGCGGGCGCTGTACCGGGGGGCGTCGGGGATCGGCGGCAAGCCGGCGGCGGGGTATGACGCGGCCGACGAGGCGCGGTACGACCCCAAGGAGCCCAGCGAGAACGGCATTGGCGGCGCCGGCGGGAGGGGGAGGAAGCGGCACCTCGCGGTGGCGGCGGTTAAGATCGGGGTCCTCGTGCTCGCGGCGGCCGCGCTCGTGGGGTCGGTGGCGTGGGCGGGGTCGCTGTACGCCGGGCGAGGGGCTGCCGCGGCTGCGGCCGCGGCCGCCGCCAGCCGTGGGTACCGCCGGCTGCAGGAGCAGCTGGTCACGGACCTGCTCGACATCGGCGAGCTCGCCGGCGGCGGGGTCCGCGCGCGGGAGGCGGAGGTGTGCGTTCCTGAGTACGAGAACTACGTGCCGTGCTACTACAACGTGTCCGACACCGTCGACGTAGCGGATCTGGGCGGTGGCGTCGTGATAAGCTACGAGCGGCAGTGCTCGCGCGAGGGCAAAATCGCGTGCCTCGTCGCGCCGCCACGGAGCTACCGGATCCCCGTGCGGTGGCCGAGTGGCAAGGGGTTCATCTGGAAAGACAACGTGCGGATTAGCGGGCAGGAGTTCTCGTCGGGGAGCCTGTTCAAGAGGTGCGTGAGCAATTTATTTTCGTCGGGGAAATTCTGAGGTGATGGTTTGGTCTATAGGTTCTAATTTGGTGCTTTTCAATTGTGTATAGGATGATGGTGGAGGAGGACCAGATCTCATTCCCATCGGACGCACATATGGCTGATGGTGTGGAGGATTACGCACATCAGATTGCAGAGATGATTGGTCTGCGGAACGAGTTCAATTTCAATGAGGCCGGGGTGAGTTGTATCCCCTGTTTGAATCTATATGCCTTTAATGATTTGTAGCTTCATAGCTAATGAATGCACGACTAGAGCTAGCTAGTGCCTAGTAGAAGAAATAAACCACTGGAATTTATGCCTATGAAGGTGTTACTCTTCTGTAAACTACTAAATTTGATTCTTCGAAAGGCGGCATACTCTCTATTCCTTCTTGGCAACATCAAAGGAATTTCCTATGTAGTTTAATTGTATGCAGATTCTTGTAATTGCATAAGGAGGCTTTCATTATGTCCGTTGAAGATCTGTTCTGGATTTGCTGTTTTGTTAATCATAGATAAAGCAGTACATTTGACACTAAGAGCAAGGATAATAGTATAGCTCACTTCCTACTATTAGCCATCTTAAAGCCAACATATATAATAGATTAGCTATAAGATTGGCTATAATTTTCTTCTCCTCTCTCTATCTCTCACTTATACATTTAATGTATTTATCTTGGAGATTGTGTTAAGCTAGCTCTTGCATGAGAGCTAACCCCCTTGATTTTTTGTTACCTCTCTCCTCTACATAAGCTCATAGTAGGCTTATAGCTCACTATTATACTTGCTCTAATATCTATTAATTTAGAATCACGGAGCAAGTTCTGTATAACCACATAATCACTGTTTGTTTTTTCTCTGCATGAGTGTATTTCTCTTATTTGTTTACACCATGATCTCTTATTCAACAGCACTGGTTCATGGTGCCCTTTCCACTAGCGGCCCTCTAGAAATATTACATGGCAAGTGGGCTGACTGGAAAGTGCTGGTCTGTTTCTACTTAATCTGACCTTTGGAAACTATGCATGGCCAATGCCCTGGAAAGTGTATATCTGGGTTTCCTTTACTGTGCTACAAAAGTTTTCTGGTAGGACTGTAAGGCATCCACTATGATCCATTACAGAAGATAAAGTTAGAGATTATATTGCACTTCCTTTCTTGTTAAGTTGGCGTGATGTTTTCTGCTGAAGTAATTTTCTAGTTTCTCACCATGGTTCACTAGTTCATCTTCGACTTTGCTATTATAAGGTTAGAGATAATTGCAATTGTTATCACATGCCTTTCTAATAGTGTTTCTTGCCATAACAATTTCAGGTTAGGACAGTTCTTGATATAGAATGTGGATTTGGTACCTTGGGAGCACACCTTTTTCAGAGAGATCTCTTGACCATGTGCATTGCTAACTATGAGGCGTCAGGCAGTCAAGTGCAAATAACACTAGAGAGAGGAATCCCTGCAATGATTGGTTCATTTGCATCGAAACAGCTTCCATATCCCTATCTTTCTTTTGATATGGTGCATTGTGCAAAATGCAATATTGAATGGGACAAAAATGGTATGCATAGTTTTTGTTCTTTCCCGTGTTCTAAATCTCATTGGTTGAAATGTTTTTTGTCAATCTAATTTTAGCCTTAATGTCCTTCATATCTGCCATCTTAGGTTAGTATCTGCACATGAAAAGGATTAAAAATTGATATAAAAATCTGACTGAACCAAATATTCAATAGCATACTGATATCTACCTGAAGTGATTTCATTTTAGTTAGTGATAAATGAGCAAATTCTGTTCTTGTCTTATTTTTGGATCACTTCAGTGAAGCTCCCGCCCTTGCAATTACCAATTTGCATGTATATATTTCTTACTCTTGAATGACAATCAAAATGTTGTTATCTTACTATTTATTTCCTTAATGTAATGTTGCAGATGGTGGTTTCTTGGTTGAAGTGGATAGATTATTAAGGCCCAGTGGATACTTTGTGTGGACATCAAGTCTGAATACACACAGGGCTTTGCGTGACAAAGAAAATCAAAAGAAGTGGAGAACCATTCGCGACTTTGCCGATAGCCTCTGTTGGGAGATGTTGTCACAACAAGATGAGACAATTGTGTGGAAAAAGACAAATAAATTGGATTGCTACAGTTCAAGGTATCATGTTGCAGTTTCGCATTATGTCTTATTTTGAATATAACCGCTTGCTGATAACTCCAAGTTGTATGATATGGCTAAATGATTAAAAACATGCTGAATTTGATGTGTTCTTTCACAGGAAATCAGGCCCTGTGCTTTGTACTCATGATCCAGAATCACCATATTACCAACCACTAAATCCCTGCATAGCAGGAACAAGAAGTCAGCGATGGATTTCCATTGAACATCGCACTACATGGCCTTCTCAGTCTAGGTTGAACTCAACAGAACTTGATATACATGGTAAGTGTCAGTCTAAATGCAACTGGAGAAAAATAACAAACAGAACTACAGACAAACAATATGGTGAAGACATGAATATTTCTAAATTGTTTCTCTGCCTTGTTGTTAGGGGTGCATTCAGAAGACTTTGCCGAGAATACTGCAAACTGGGACTCAATGGTGCGAAACTACTGGTCTTTGCTGTCTCCTCTTATATTTTCTGATCATCCAAAGAGACCCGGTGATGAGGACCCACAACCACCATTTAACATGCTAAGGAATGTTCTAGACATGAATGCTCACTTCGGTGGATTTAATGCTGCTTTACTTAAGGCTGGAAAATCTGTATGGGTGATGAATGTTGTTCCTACAAATGCTCCAAACTATCTGCCGCTAATTTTTGATCGTGGTTTTATTGGGGTTCAACATGACTGGTAAGTAATTGCCCTTGGCTCACAAGTTCTCTCTAATTTCCCCCTTTTTTAGGTGGTGTTGTATACGTTCTGCTTATTTGAAATTCCTATTTCTCTTTCTTTCAAAGTTGCATATTATAAACTATAAACACCATTAAACATAAACCTTTTAGCATGCTTAACGAAAATACTTTTCATGTAGAATAAGCATATGTAAATAACATTGAGATCAATGCAACATGCATGTGTAAGAACCTTTTTAGATTTGTAGTTATGTTGATCTGCTGATCACATACCTTCGATCGACTGATAAAATGTGAAACGTGTTTAGGTGTGAAGCATTTCCAACTTATCCAAGAACATATGATATGGTCCATGCTGATGGCTTTCTATCACTTGAGAAGCACCAAAAGCATAGATGTTCTACTCTTGATATATTCTTGGAAGTTGATCGCATCCTACGTCCAGAGGTAAGCAACCTTTTCTAATTATATACTCCGTACTGATTTTGTAACAGAATCATTTAATCATAAAAGTGGATCCGTAACTCGCATATAGATGTTCTAGTACATGTGTGCCAACAAACCACAACAAGTTATTGCTGGTTCAGAATAACCAAATGATTCATATGGTAGAGGACGCAAGTATGGTGTGTGTGCTGGTGATTGTTGGGTGTGTCCCCTTTATTGGTTATGTTGGTTTAGGATTTTCCTTTTTCTCTGTTACTTTCTCTCCCACTTTTTTTGTGTGCCAATTTTGGCACTGCAATGACTGTGTGCGCCCCTAGTTGGGTAGTTATTGTAGAGGTTGAGAGTTAACACTTCTATTGTATGAAACAAGTTAGTGCATTATTGCTTAATTATGCCGTACAGAAGTATTGTATTTATTTGTGCAAATATTGTGGCAACCCTGGTTGAAGACATTGTCATTTCTTGTAAAATAGTGCACGCTTAGTTTAGAATCAGCACCCGCCTTACATCCTTTATATTCGAAGCTGTACATGCATCAGTTATAAATTGATTTGTACTCTTATGTTGTCTAAATTTTAGCTACTTATTTGATGCCTATGCAGGGTTGGGTTATAATCCGTGACACTGCCCCTCTTATTGAAGCTGCAAGATCTGTTGTAACACAGCTCAGGTGGGATGCCCGTATTTTGGATCTTGACATAGCTAGTGATGAAAAACTTCTGGTCTGTCAGAAGCCATTTATTAGAAAACAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005599