BGIOSGA005601

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Revision as of 02:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005601| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005601, complete gene.| tag = P0627E0...")
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Gene Name

BGIOSGA005601

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005601, complete gene.

LocusTag

P0627E03.18

Ensembl Transcript ID

BGIOSGA005601-TA

Ensembl Protein ID

BGIOSGA005601-PA

Length

4770

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33782977..33787746

Sequence Coding Region

33787456..33787746,33787257..33787352,33786884..33786972,33786596..33786725,33786375..33786467
,33785917..33785991,33785062..33785179,33784617..33784759,33783692..33783820
,33783189..33783349,33782977..33783115

Genome Context

<gbrowseImage1> name=IndicaChromosome02:33782977..33787746 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:33782977..33787746 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCTCCGCGTCGGCGTCGCTGCGCCACCACCTCCTCCTCCGCCGCCGCCCGCGCTTCCCCCTCGGCCCTAGCCCCACTTTCCGCACCTCCTCCCTACCCCGCCGCCACCAGCGGCTCTTCGCCTCTGCCCCATCCTCGTCGACGGTGGAGAATGGCGAGCCCTCCTCGCCGGTGGAGCCGTCCGACGGTGCGTCCGTCGTCGACGTGAATCCGCCGCGCGGGACCAGGGATTTCCCCCCGGAGGACATGCGCCTCCGCACCTGGCTCTTCGACCAGTTCAGGGAGGTGTCCCGCGTCATGGCGTTTGAGGAGGTGGACTTCCCAGTGCTCGAGTCTGAGGCGCTCTTCATTCGCAAGGCCGGAGAGGAGATCACGCAGCAGCTTTATAACTTCGAGGATAAAGGAGGGCGCCGTGTTGTTCTGAGGCCTGAAATCACCCCTTCCTTGGCACGCCTAGTTATAAAGCAAGGAAAATCAGTCTCCCTTCCACTGAAATGGTTTACTATAGGACAATGCTGGCGATATGAGCGTATGACAAGAGGAAGACGGCGTGAACATTATCAATGGAACATGGATATTTTTGGCATGCCTAAAGTTCGAGCAGAGTCTGAGCTTCTTCAAGCTATTATTCTCTTATTTGAACGTCTTGGGATTACATCTTCAGATGTGGGGATCAGAGTGTCCAGCCGAAAGGTCCTTCAGGCTGTGTTGAATATGTACTCCATTCCAGAACATTTGTTTACTGAAGTTTGTGTGATTGTTGATAAACTGGGAAAGCTGACTAGAGAAGAAATTGAGAAGAAGTTGGTTACAATTGGGCTGTCATCTGAAGCTGTGCTGGGTATCATTGAGGTTCTTTCTCTCAAGTCGCTACCCAAGCTTGAAGAGGTGCTAGGCTCTGATGTTGAAGCTGTTGCTGACTTGAAGAAGTTGTTCTCGTTTGCTGAGCAGTACGGTTATGCTGATTGGATTTGTTTTGATGCATCTGTTGTTCGTGGCCTTGCATACTACACAGGAATTGTTTTTGAGGCTTTTGATAGAGATGGAAAACTGAGAGCAATTTGTGGTGGAGGAAGGTATGATAGACTACTTTCAACATTTGGTAGTGAAGACATACCAGCTTGCGGCTTTGGATTTGGAGACGCTGTTATAGTGGAACTGCTGAAAGAAAAGGGTCTGTTACCTGATCTGTCACGCCAAATAGATGACATTGTCTTCCCATTGGATGAGGAGCTTGAAGGGCCAGCATGTAGTGTTGCTTCCTCTCTGCGGAGGCAAGGCAGAAGTGTAGACCTTGTAGAAGACAAGCGTCTTAAATGGGTATTTAAGCATGCTGAGAGGATAAATGCTGGTAGGCTGATATTGGTCGGAAAATCCGAGTGGGAGCGAGGTATGGTTCGTGTGAAGATATTATCAACCAGAGAAGAATTTGAGGTCAAGGCTGGCGAACTACAATAA</cdnaseq>

Protein Sequence

<aaseq>MAASASASLRHHLLLRRRPRFPLGPSPTFRTSSLPRRHQRLFASAPSSSTVENGEPSSPVEPSDGASVVDVNPPRGTRDFPPEDMRLRTWLFDQFREVSRVMAFEEVDFPVLESEALFIRKAGEEITQQLYNFEDKGGRRVVLRPEITPSLARLVIKQGKSVSLPLKWFTIGQCWRYERMTRGRRREHYQWNMDIFGMPKVRAESELLQAIILLFERLGITSSDVGIRVSSRKVLQAVLNMYSIPEHLFTEVCVIVDKLGKLTREEIEKKLVTIGLSSEAVLGIIEVLSLKSLPKLEEVLGSDVEAVADLKKLFSFAEQYGYADWICFDASVVRGLAYYTGIVFEAFDRDGKLRAICGGGRYDRLLSTFGSEDIPACGFGFGDAVIVELLKEKGLLPDLSRQIDDIVFPLDEELEGPACSVASSLRRQGRSVDLVEDKRLKWVFKHAERINAGRLILVGKSEWERGMVRVKILSTREEFEVKAGELQ</aaseq>

Gene Sequence

<dnaseqindica>1..291#395..490#775..863#1022..1151#1280..1372#1756..1830#2568..2685#2988..3130#3927..4055#4398..4558#4632..4770#ATGGCCGCCTCCGCGTCGGCGTCGCTGCGCCACCACCTCCTCCTCCGCCGCCGCCCGCGCTTCCCCCTCGGCCCTAGCCCCACTTTCCGCACCTCCTCCCTACCCCGCCGCCACCAGCGGCTCTTCGCCTCTGCCCCATCCTCGTCGACGGTGGAGAATGGCGAGCCCTCCTCGCCGGTGGAGCCGTCCGACGGTGCGTCCGTCGTCGACGTGAATCCGCCGCGCGGGACCAGGGATTTCCCCCCGGAGGACATGCGCCTCCGCACCTGGCTCTTCGACCAGTTCAGGGAGGTAAGCGAACGCCGCAGCTGCGCTTCTCATCTCTCTCGAGGAGCCATCAAGGGTTGCTTGCTAGGACTAGTTGCTAATGCTAGCTTCCCGTTTGCAACTGAAGGTGTCCCGCGTCATGGCGTTTGAGGAGGTGGACTTCCCAGTGCTCGAGTCTGAGGCGCTCTTCATTCGCAAGGCCGGAGAGGAGATCACGCAGCAGGTACCAACGCCGCCCTTTACAGTGCAGTGTCACTAGCTTAGAGTGTACTAGCTCTCTAATGTGAAACCGAATTGAAATTATCTTCTCATGGTTCAGAAATGCACATACCTTGGCATACATTTCAGTAGATTATAAACTTGTTGATCATGGTAGAATAGATCAGAAGGAATCTAAGTTTATGTGCTTTTTCTTTTCGTTTTTCCTCTTATACCGATGTTCTAGTTCTGTTTGCAGATCTATTATTCAAGTGTTAGTTACGAAACTTTGTACTATTGCTTCTGTAGCTTTATAACTTCGAGGATAAAGGAGGGCGCCGTGTTGTTCTGAGGCCTGAAATCACCCCTTCCTTGGCACGCCTAGTTATAAAGCAAGGGTATGCCTTTTTCAACTGGTTTGTTTGTGGCATGCTTGACTTACATTCATGTTTGTGGCATTTTCCATTAATTTCTGTTGAGTGACCATTTCATCTTTGCCATATTATGAGTTTGTTCTTTGAAATGTGATTTTTCGCTTACTTTTTCTCCTGTCTAGAAAATCAGTCTCCCTTCCACTGAAATGGTTTACTATAGGACAATGCTGGCGATATGAGCGTATGACAAGAGGAAGACGGCGTGAACATTATCAATGGAACATGGATATTTTTGGCATGCCTAAAGTTCGAGTAAGTAGTAAATTCGTTCTAGTGTGAGATTCATATTTGTCCTTGGATTCAGATGCCACTCTGCTACATTGTAGCACCTTGTTTGATTTTAATTGATTTAGAATTGACTTATTGTTAATAAAAATCAGGCAGAGTCTGAGCTTCTTCAAGCTATTATTCTCTTATTTGAACGTCTTGGGATTACATCTTCAGATGTGGGGATCAGAGTGTCCAGCCGAAAGGTAACACTTTTGTACATATGGCTAACCTTTTTCCTCTGAAAAATCTTTTGCAATATTTTCTATTTGGTTATTATGTTTTTACTTTTCTTTCCCTATTTTCCCTTTCCTATGCCAGTCTGGTGTCAATATTTCATTTATCACTATTGAAACGTAAGGTACTGTGAGCTGATGTGCTGCATATCATGTTACTACATGAGTACATGCTCACGGAGAATGTATAAATTACATATATTTTTCATTTCTTATGTGATGAGGAGCTATTGGGACCCAAATGGTGTAGTGACTGCCACTTGATAACTGCTTTGCATGTGTTACTGCAGTCTGGACATGTTTATTGACATGGCACCTCTTTTGTATGTCTGACCATTCTTTGTTTTCTCCAGGTCCTTCAGGCTGTGTTGAATATGTACTCCATTCCAGAACATTTGTTTACTGAAGTTTGTGTGATTGTTGATAAAGTATGGTCAGATTCTACTAACGACTTTCCACCCTTTACATTGTGAAATTCAATATTTGTACCCTGATGTTTTCTTGCTTCTGTTTGAATGTTGACAACCAGCAAATAACATATAACTGCAAATAATAGCAGGGAAATTAGCAATGTAGTGTATATTCTTTGGCTCATTCCTGAAAGTTTGTCTAATGAACTATGGGTCATTCACATCAAATTCTCTAGTAAGGTCCTGATGGTCTAGGATAATTATCAACTTGCCATTCATCAAGTTTGCCCGAAATAAGTTCATTTCTATCCCCTTAACTACCGTCGGTCTTGATTTAAGTGAAGTTCTGCATATTTTCTTCTTAGCTATTCAGTCCAGGTACGGAGTTAAGGATAAATCACTCAATTGAGCAGCCCATGGCTTATACAAATAGAAGCTGTGACATGGGCCTTCTCCCTGCTTGTTTCTCATTGAAATTTATGGGCTTGTTTGTAAGATGATAAATTTTTGCACCTTGTCTACCTCTCTGGTGAAACCCAGAAATGGACCAGTAATCTATTATACAATTCCAGTCTTATCATTAATTGTAATATGCCACAGGCCATCATTTATGCCTTTTGCGTGGATACTCTTTTTTATAGCATTAGATGAAGGAAATTCCTTAGGTGAATACTTGCATTAGTGCAATGTTTTGTTGATATCTTCATGTTGGCATTTTTTTTTCCTTGTCTAACACTTAGTTTACCATTGAACAGCTGGGAAAGCTGACTAGAGAAGAAATTGAGAAGAAGTTGGTTACAATTGGGCTGTCATCTGAAGCTGTGCTGGGTATCATTGAGGTTCTTTCTCTCAAGTCGCTACCCAAGCTTGAAGGTTTCCTCCTGACCTTATTGTTTGTTTTTGTTCATGGACTATAATTAATCAATGGACTGCTGCAAAATGAATAAGCTCGTTTGATTATTTCTTTAGATCATGTGCCAAACTAAAAATTGTATTTCTAAAGAAAATCATCAACAGCTACGTTATATTCTGGGATCTTTTTTTATTTTTAAAAAATGCTCTTACTCTGGCGATTTCAACTAATGCTATCCGCATTTGCATTTATAAAAATATAATCATTGCATCTTTCAGAAAGGTGGCTATTGTTCATCTTTAATTTTGGTGTTCTCATACAGAGGTGCTAGGCTCTGATGTTGAAGCTGTTGCTGACTTGAAGAAGTTGTTCTCGTTTGCTGAGCAGTACGGTTATGCTGATTGGATTTGTTTTGATGCATCTGTTGTTCGTGGCCTTGCATACTACACAGGAATTGTTTTTGAGGTTGTTGTTGAAGCGTCACCTTATGTTACATATATCTATATTATTGTTTATTCAACAATTTATAGGGTTACTAACAAAAGTGACAAGTAAAGAATTTGAGATTTCATCAAATTATGTTAAGATACGTTTCTCATTTGAGAAAAGGTGCAGTTCCTTCAGGTTTTCATTTTCAACCAACAATGCTTTCCTCTGTTTACAAGTCAGGGCTCTAAATAGCAACTGCATAGAGTTACAACTAGGAGGTAGGAGCTACCCAAATACATTTTTTTGAGATTATTATGCATAGTTCTGTTGGTCTTTGCCCTCAAATTATCTGTTGTAGATTCTTCCTCCTAGCATCATCACGGGTGCTCATATTTCTGTTAGGCTTTGCTCCTCATGACGAATGCTCCTAGCATCATATTTTATTATTTTGTTAGTTGTTGCTGCTCAAATTATCCGCTATGAGTACTCTGGATAGATGCCAGTGTTACAATAGCTAATTTAGATGAGAACTGCAATTGCATTATCTTCATCATTACTCTTGGTCATACTGTTAGCTCTTCTGACAAGAGGATATTTAGGTTCTTATGCTTCCTTTAAGAAAGCCGTACTCTCATCAGCTTTCAAGTAGATAAAAGGATAGTGACATCAGCTATCGGCTATCGGCCTTTGTGAAAGCTTCTCTTTAATATGTTTTATCCTTTGCCTTCGGAATTCTATTTTTTAACCTGAATATTGGATGCATCCTATACCATAGCTCTTCTTGGTACCAACTCTTGTTTCAATCTTAAGTTCTATTGTTCTATTCATGTAGGCTTTTGATAGAGATGGAAAACTGAGAGCAATTTGTGGTGGAGGAAGGTATGATAGACTACTTTCAACATTTGGTAGTGAAGACATACCAGCTTGCGGCTTTGGATTTGGAGACGCTGTTATAGTGGAAGTATGTCTTCTTTTTCATTCCTTTTTGTGGTTTGTAAAAGATTAGATTATCCCTTTGATGTTTAACAAGTACATAAACAATACCTGCTAATATATAAGTAGACAACTGACGACAGCAACAGGGAATTCACAATCTACATTGTAGTAAGTCCCATGCGGTACTAAGAACATGAAAAGGGGCGGTACTAAGAACATGAAAAGGTTATCACTGTTAATATACAAGTAGACAACTGATACAACAGCAAATTCTGGTGAAATGGTTATCATTGTTTGTTTATTGCTGTGAATTTATGATGCATTTTCAGATGCACTAACGTCAACACTATAATTTGTATCCTTGCAGCTGCTGAAAGAAAAGGGTCTGTTACCTGATCTGTCACGCCAAATAGATGACATTGTCTTCCCATTGGATGAGGAGCTTGAAGGGCCAGCATGTAGTGTTGCTTCCTCTCTGCGGAGGCAAGGCAGAAGTGTAGACCTTGTAGAAGACAAGCGTCTTAAATGGTATACCTTCTGAATTTTCGGGAGTACCTACTCGGCTGTTATCCAAATTTGTAATGCTTTTTATTTCTACCAGGGTATTTAAGCATGCTGAGAGGATAAATGCTGGTAGGCTGATATTGGTCGGAAAATCCGAGTGGGAGCGAGGTATGGTTCGTGTGAAGATATTATCAACCAGAGAAGAATTTGAGGTCAAGGCTGGCGAACTACAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005601