BGIOSGA005609

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Revision as of 02:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005609| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005609, complete gene.| tag = P0431B0...")
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Gene Name

BGIOSGA005609

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005609, complete gene.

LocusTag

P0431B06.43

Ensembl Transcript ID

BGIOSGA005609-TA

Ensembl Protein ID

BGIOSGA005609-PA

Length

4019

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33635664..33639682

Sequence Coding Region

33639290..33639682,33638425..33638724,33638152..33638321,33637936..33638033,33636352..33637116
,33635664..33636262

Genome Context

<gbrowseImage1> name=IndicaChromosome02:33635664..33639682 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:33635664..33639682 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCGTTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCGTCACCCGCTACGCCTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACACGTACAACCCTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCCAGCGGCATCATGTGCTCCTACAACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGGGAGATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCTGGAATGGACGTGAACTGCGGCAGCTACGTGCAGGAACATGGTCTATCTGCAATCCAGCAAGGGAAGATCACAGAACAAGACATCAACAGAGCCCTCCACAACCTCTTCGCTGTCAGGATGAGGCTGGGGCTCTTCAACGGCAATCCAAAGTACAACCGCTACGGTAACATTGGCCCAGACCAGGTGTGCACGCAGGAGCACCAAAACCTTGCCCTTGAAGCAGCACAACATGGCGTTGTCCTACTGAAGAACGACGCCAATGCTCTCCCCTTGTCCAAATCACAAGTCTCATCCATTGCTGTCATTGGGCACAACGCAAATGACGCCACGAGATTGCTTGGGAATTACTTCGGCCCTCCTTGCATATCGGTGACTCCTCTCCAAGTGCTGCAAGGCTATGTGAAGGACACCAGGTTCCTAGCTGGGTGCAACTCGGCTGCCTGCAATGTGTCATCAATTGGTGAAGCGGCGCAATTGGCAAGTTCAGTGGACTACGTTGTGCTGTTCATGGGATTAGACCAAGATCAGGAGAGGGAAGAGGTTGATAGGCTGGAACTGTCGCTCCCAGGAATGCAGGAGAACCTCATCAACACGGTCGCTAACGCGGCAAAGAAGCCGGTGATCTTGGTGCTACTGTGTGGTGGTCCAGTGGATGTGACCTTTGCTAAGTATAATCCCAAGATTGGGGCCATCCTGTGGGCTGGTTACCCTGGCGAGGCTGGAGGGATTGCGATTGCTCAGGTCCTCTTCGGAGAGCACAACCCTGGTGGAAGGCTGCCAGTGACCTGGTATCCAAAGGAGTTCACGAGCGTGCCCATGACAGATATGCGGATGCGTGCCGATCCATCCACGGGATATCCCGGACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCACCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGCAGGCACCCCGTGCTGCTCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAGCCAGCTGATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MGRRARALLHAPAPLLLLLALAAAASGPPFSCGAPSSAAFCNPRLPIEQRADDLVSRLTLEEKISQLGDQSPAVDRLGVPAYKWWSEALHGVSNAGRGIHLDGPLRAATSFPQVILTAASFNPHLWYRIGQVIGTEARAVYNNGQAEGLTFWAPNINVFRDPRWGRGQETPGEDPTVTGKYAAVFVRGVQGYALAGAINSTDLEASACCKHFTAYDLENWKGVTRYAFDAKVTAQDLADTYNPPFRSCVEDGGASGIMCSYNRVNGVPTCADYNLLSKTARGDWRFYGYITSDCDAVSIIHDVQGYAKTAEDAVADVLKAGMDVNCGSYVQEHGLSAIQQGKITEQDINRALHNLFAVRMRLGLFNGNPKYNRYGNIGPDQVCTQEHQNLALEAAQHGVVLLKNDANALPLSKSQVSSIAVIGHNANDATRLLGNYFGPPCISVTPLQVLQGYVKDTRFLAGCNSAACNVSSIGEAAQLASSVDYVVLFMGLDQDQEREEVDRLELSLPGMQENLINTVANAAKKPVILVLLCGGPVDVTFAKYNPKIGAILWAGYPGEAGGIAIAQVLFGEHNPGGRLPVTWYPKEFTSVPMTDMRMRADPSTGYPGRTYRFYRGNTVYKFGYGLSYSKYSHHFVANGTKLPSLSSIDGLKAMATAAAGTVSYDVEEIGTETCDKLKFPALVRVQNHGPMDGRHPVLLFLRWPNGAADGGRPASQLIGFQSLHLKSMQTVHVEFEVSPCKHFSRATEDGKKVIDHGSHFMMVGDDEFEMSFTP</aaseq>

Gene Sequence

<dnaseqindica>1..393#959..1258#1362..1531#1650..1747#2567..3331#3421..4019#ATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCGTTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTACGCACGTACGTGCTCAGCGCATGCACGGCCTCGATCGTTTCCTCACTTTTACTTTTTTACCGTGTTGGTGCAAATTCACGCTAACACCAGTGGTTAGTTACTGTTCAGTACTGGAAGGGACTTAAGTGTAACTGGTTTGTAGTCTCTTTCTCAATTTTACCTTTGAGGGGTTAAAAGAAACAGAGGAGTCTTTGCGCCTAATTTATGCCCAGAATGTCAGTAATATATTCAGGGTGCTACTGGTACATACTGAGTCCAATAATCCACACATTTTAGGCAGCTTGTTGGTAATCCATCACCCGTCGGCCCTATGAACTTTTGTACACCTACGGACCTATAGGAGTAGGTAAGAACGTGTTCGGTACATGCATGAAACTTTTGGGGTTGTTTTTGTCAAATGAGACGGTAACAAGTCGTAAAGCAGATACTACTAAACAACGCAGCAAACCGCAACAACATGCAGAGTAGTAACACGAAACAAGAGCAGAGAAAACCGTACCTGAATTCCTCTGTAAACTGATTCTGGTTTGGGTGCTGTGCAATTGGGGGCACTGCAACGCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCGTCACCCGCTACGCCTTCGACGCCAAGGTGGTGACCCGTCACGACACGTTGTTCTGTCAGCAAATGGTCTGGCTAATTGGGTGACCCTGCCATTGACGAGGCTCTGAGTGATGCGATTTTTTTTGGTCAGGTGACGGCGCAGGACCTGGCCGACACGTACAACCCTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCCAGCGGCATCATGTGCTCCTACAACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGGGAGATTGGAGGTTTTACGGGTAAGCCAGAATGACTGGAGCTATCAGTTTTTTCTTTGGCCTAGACATGAAGTTTTTGTTCAGTGTGTATGTGACAATGCCCAGCAACTGATCCTTGCAAGTTTTCCTCTGTTGACAGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCTGGTATGAATTTGCACATCACAGCTAGTAATACTTGTCCACTATATATTTACTGGTCAGAATCACCCAATTGTCCTATTACTCTGTCAGAGATGGGGTAATTCCACAATATATTGTAGTATCTCAAATATGTTACTTCCTCTGTAAAAACAAAAAAAAAAATTGGCGACAAATCTAGACAAGTGTCGGGACGGAAGTAGTACTATTTTGCAACTTTCAAGTGTTTGTTTTCCTCACATGGAGCCCTCCGGGAATAATGCAAAGATATAGGGAGGTTAGGTTAGGTCACTGAACTGCAACCAAAAGTTGATTTGGATCCCACTACCCATACAGGCATACAGCTTTCCCGTTTTGCTGATTTAGGTACTTGAGTGAGATTAATGATCTGTTCTCTAAACAAAGGTATTTCAGTGAGTCCACTAAGAAATAATTCATGGCATGACACTGAACATCATGATATCATCAGGAATCCATCTGTCAATAAAAAAGGAAGATCACCTCTGCTTGTAAGTAGTTGTGCTAGTGTTACATAGCAAGGGTTCAAGTCAACAACGACAATGAATAGCAAAAGACAGTATATAAAAGGTTCAAAAAGAAAACTAACTCAGCATGTAAGTAGTCATTCTGGTGTTACATGGCAAGGGTTCAAGTCAACAACAATGAGTAGCAAAAGACAGTAGATAGTAGGTCCAAATCAACAAAAAAGTTAAAACAATAAAACAACAAATGCAAATTGCTTCTAACATTAATGCAACGATCCGATATACTCCATATTATTTTTTTAAGAAGTGTTTCTTACCTTCTGTAACAACACACTTCCAGGAATGGACGTGAACTGCGGCAGCTACGTGCAGGAACATGGTCTATCTGCAATCCAGCAAGGGAAGATCACAGAACAAGACATCAACAGAGCCCTCCACAACCTCTTCGCTGTCAGGATGAGGCTGGGGCTCTTCAACGGCAATCCAAAGTACAACCGCTACGGTAACATTGGCCCAGACCAGGTGTGCACGCAGGAGCACCAAAACCTTGCCCTTGAAGCAGCACAACATGGCGTTGTCCTACTGAAGAACGACGCCAATGCTCTCCCCTTGTCCAAATCACAAGTCTCATCCATTGCTGTCATTGGGCACAACGCAAATGACGCCACGAGATTGCTTGGGAATTACTTCGGCCCTCCTTGCATATCGGTGACTCCTCTCCAAGTGCTGCAAGGCTATGTGAAGGACACCAGGTTCCTAGCTGGGTGCAACTCGGCTGCCTGCAATGTGTCATCAATTGGTGAAGCGGCGCAATTGGCAAGTTCAGTGGACTACGTTGTGCTGTTCATGGGATTAGACCAAGATCAGGAGAGGGAAGAGGTTGATAGGCTGGAACTGTCGCTCCCAGGAATGCAGGAGAACCTCATCAACACGGTCGCTAACGCGGCAAAGAAGCCGGTGATCTTGGTGCTACTGTGTGGTGGTCCAGTGGATGTGACCTTTGCTAAGTATAATCCCAAGATTGGGGCCATCCTGTGGGCTGGTTACCCTGGCGAGGCTGGAGGGATTGCGATTGCTCAGGTCCTCTTCGGAGAGCACAACCCTGGTAAAATTTCATTCACTTTTTGATCTTCTCATCAGTAGATGAGTACGTTCAAATACTGAACTGTGTTACATGTGACCTATGTTCATCAGGTGGAAGGCTGCCAGTGACCTGGTATCCAAAGGAGTTCACGAGCGTGCCCATGACAGATATGCGGATGCGTGCCGATCCATCCACGGGATATCCCGGACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCACCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGCAGGCACCCCGTGCTGCTCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAGCCAGCTGATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005609