BGIOSGA005622

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Revision as of 02:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005622| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005622, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA005622

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005622, complete gene.

LocusTag

OSJNBA0078N11.28-1

Ensembl Transcript ID

BGIOSGA005622-TA

Ensembl Protein ID

BGIOSGA005622-PA

Length

5080

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33464919..33469998

Sequence Coding Region

33469719..33469998,33469523..33469627,33466859..33466956,33464919..33466784

Genome Context

<gbrowseImage1> name=IndicaChromosome02:33464919..33469998 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:33464919..33469998 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGCGGCGGTGCTCCCGCGACCCGCGGACATCACCCCGGAGCTCCGCCGTTTCCTCGACTCCCGCTTCCGCTCGCAAGCAGACCTCGCCGCGGCCGCCGACGTCGAGGCCGAGATCCGCGGGCGCTACGCGGAGCTCGAGGCCTCGGTATCCGACCTCTCCGTCCGCCTAGCGGCCGCCGCCGCAGCTTACTCCTCCAGCTGCAGCGCCGCCGGCACCGCTCTGAGTAATGTCCGCGGCTGCCTCGCTGCCCTGAATGCCTCCACCTCTGAACCAGGGGTCACAGAAGCGGTGGAGGTTGGGAGCGAGGAGATGTTGTTTGAGCAACTTTCTTCTCTGGCCAAAGAGGTGGCGAGAGTGGAGTTGGTCAGGGATTACGCCGAAACGGCGCTAAAGCTTGACAGTTTTGTCGGCGACGTAGAAGATGCTGTTTCATCTTCTGTGACCGGAAAACTTAAATCTCGTGCAGAAAGTTCACTGAAAACATATCATGTTCCTATTGGATATCTTAAAACAATAGAAGATATTTTATCTTCAGTCACAAAGACCAGACCACAATGGACTCGCCTTGTTTCTGCAGTGGATCACAGAGTTGACCGATCTTTGGCTCTACTAAGACCACAAGCAATTGTCGATCATCGAGCTCTTTTGGCATCCCTTGGCTGGCCTCCATCACTTTCTGGAACAAATTTTTCTAGTATTAATTCTGGGAAACCATCAGAGATTGTGAACCCCTTATTTTCAATGAAGGGTGACCTGAAAAGCAAGTATTCTGAGAGCTTTCTTTCGCTATGCAGTTTGCAGGAATTGCAAAAACGTAGAAAAGCTCGACAGCTAGAAGGGCACATTGTCAACAATCAACTACGTCAACCATTATGGGTAATTGAAGAGTTAGTAAATCCAATAGCTGCTGCCGCACAACGCCATTTCTCCAAATGGGTTGAAAAGCCTGAGTTTGTTTTTGCTCTTGCTTATAAGATAACTAGAGACTTTGTAGATTCCATGGATGAGATATTACAGCCCCTTGTGGATAAAGCTAACCTTGTAGGGTATAGTTGCAGAGAAGAGTGGATTTCTGGAATGGTCATCACATTGTCGACATACTTGGTGAAAGAGATATTTCCTAAGCATATTGAACTTCTTCAGGAAATTAGCTCGGCTGATGCTAGCAGCAAACAATCTCAAGCTAGAGTCTCATGGCTTAATCTTATTGACCTGATGATATCTTTCGACAAGCAAACCCAAGCTTTGATCTCAAGTTCAGGACTCCTACTTTCGGTGAAGGATGATGATAATTGGCAGAGGATCTCGGTTCTCTCCGTCTTCTGTGATCGGCCAGACTGGCTTGAAATATGGGCAGAGATTGAGAGACAGGATACTCATGATAAGCTGAGATTATCAATGGAGAATGAGAAAAACTGGAATACAAGGTTTCAAGGAACAGTGCTTGAATATGGTTCAGATGACTATAAGTCTCCAGCAATTACCGGTGTAATCCAAAAGGGCCTGTCCTTGCTAATAGATCGTGCTCGGCCCATTCCAAATATAGCACTTAGAGCAGAATTCATTAAGATTTCTACTTCACCTTTATTATCAGAGTTCCTTGGCTGGATGCTTCAAAGGTGCCAAGAAGCAGAGGGATTAACAGCTCTGGCAGATGATAATGCTCTTCTCAAGGTATCACAGTCCATTAATGCAGCTCGATACCTTGAGTCCACATTGACAGAATGGTGCAATGATGTATTCTTTCTTGAGATGGAAAATATAGATGGCCGTAGCGAATGTATCTTCCAAGTGGAGATAAATCACCTGAAAGATTTTAGAGTACAATGGACTGAAAAGATTTCTACCGTCATTTTAAGGGATTTTGATGCCCGGTCAAGGGATTATCTGAAAAATAAAAGGCAGTGGCAGGAGAAATCAGAAGGGTTAACATTATCCAGGGCATTCGTAGAATGTTTAGACTACATGCAAGGACGGATAGCTAAGCTGGAAGATGGTCTAAATGTCCTGGATTTTGTGACTGTGTGGAGAACTGTGGCAAGTGGAGTAGACCAGCTGCTCTTTTCTGGAATTTTCAGTGGCAGCACAAAGTTTAGTAATGGCGGGGTGGAAAGACTTCATGGTGATCTGAGTATATTGTTTGCTGCTTTTTCTGCGTGGTGTATGAGGCCTGAAGGCTTCTTTCCAAGACTGTCTGAGGGATTGAAGTTATTGGATATTGATGAGAAGCAGCTAAGAGATGGAGCTTGTACAGATAACAATCGGCTGAGGGAGTATGGTATAAGGCGTTTGACGGCTGCTGAGGTTGAGAAGATAATAAAAAACAGAATCTATGAGTCGTAA</cdnaseq>

Protein Sequence

<aaseq>MEAAVLPRPADITPELRRFLDSRFRSQADLAAAADVEAEIRGRYAELEASVSDLSVRLAAAAAAYSSSCSAAGTALSNVRGCLAALNASTSEPGVTEAVEVGSEEMLFEQLSSLAKEVARVELVRDYAETALKLDSFVGDVEDAVSSSVTGKLKSRAESSLKTYHVPIGYLKTIEDILSSVTKTRPQWTRLVSAVDHRVDRSLALLRPQAIVDHRALLASLGWPPSLSGTNFSSINSGKPSEIVNPLFSMKGDLKSKYSESFLSLCSLQELQKRRKARQLEGHIVNNQLRQPLWVIEELVNPIAAAAQRHFSKWVEKPEFVFALAYKITRDFVDSMDEILQPLVDKANLVGYSCREEWISGMVITLSTYLVKEIFPKHIELLQEISSADASSKQSQARVSWLNLIDLMISFDKQTQALISSSGLLLSVKDDDNWQRISVLSVFCDRPDWLEIWAEIERQDTHDKLRLSMENEKNWNTRFQGTVLEYGSDDYKSPAITGVIQKGLSLLIDRARPIPNIALRAEFIKISTSPLLSEFLGWMLQRCQEAEGLTALADDNALLKVSQSINAARYLESTLTEWCNDVFFLEMENIDGRSECIFQVEINHLKDFRVQWTEKISTVILRDFDARSRDYLKNKRQWQEKSEGLTLSRAFVECLDYMQGRIAKLEDGLNVLDFVTVWRTVASGVDQLLFSGIFSGSTKFSNGGVERLHGDLSILFAAFSAWCMRPEGFFPRLSEGLKLLDIDEKQLRDGACTDNNRLREYGIRRLTAAEVEKIIKNRIYES</aaseq>

Gene Sequence

<dnaseqindica>1..280#372..476#3043..3140#3215..5080#ATGGAAGCGGCGGTGCTCCCGCGACCCGCGGACATCACCCCGGAGCTCCGCCGTTTCCTCGACTCCCGCTTCCGCTCGCAAGCAGACCTCGCCGCGGCCGCCGACGTCGAGGCCGAGATCCGCGGGCGCTACGCGGAGCTCGAGGCCTCGGTATCCGACCTCTCCGTCCGCCTAGCGGCCGCCGCCGCAGCTTACTCCTCCAGCTGCAGCGCCGCCGGCACCGCTCTGAGTAATGTCCGCGGCTGCCTCGCTGCCCTGAATGCCTCCACCTCTGAACCAGGTATCACAGATAAACACTTGTTACTGATTTCTTACATACTGTTCTTCGCGAGTTGATTTTTGCTCGAATTTTTGATTCATTGTTGTTTTAGGGGTCACAGAAGCGGTGGAGGTTGGGAGCGAGGAGATGTTGTTTGAGCAACTTTCTTCTCTGGCCAAAGAGGTGGCGAGAGTGGAGTTGGTCAGGGATTACGCCGGTGAGTGTGAAATTAGTTTCCTCGGACCTTGTATCCGTGCTTTGTTTGATATTTGATATTTCGGATGATTAAAAGCTGACAATGAGATCACTCCTATGACAACTCTTAACGCTGTCAACTCTTTTCCTCGTATACTTTTGTTTGTTTAGTTTAGCCATAATGTGTTGCGAAATACTGATGCACGATCTACTGCTTGCTTAAGAAATTTAGATTGGATAATTTTATTAGGCATGTAGAAAATGACGCTTACGAATTTGAAACCGACCAATGTTTTATCATGTCCATTATATTGATACGATGTGATGCCTTTACTTAGAAATGTACTGTACTAACATTTGATACAATGGGGCATGGATTGCTTAAAATTGGAGCAGACTGGGTGTTGGTGATATAGGTTTTGGTGACTGGTTAATAATTGGTCTTGGTGGGTACAGATTGCCAATACAGTTGGGTAGGACGATGATATCTGTTCTGGCACTCACACGATTAATCAACAACTGGGCTTGGCAACCCTAGAAAGGGAGTGTCATTTTGATTAGGAATAAATACTCCCCTGAACTTTTACCGAGTCCTTCTAGCACCCTGAACTATTAATCGGATATTTAGCTCCTGAACCTGTTAATACGGTCCACTCAACCTCCTAAGCCCTTATTTGGATAGGCTGAAATCACTGCCGCATCCACATGTCTGGCTGGAATTTTGAAATCTTGGCTCACACCTGTGGATGGGCCAGGATCGAGGCACACTTAAAAGAGGCCTAAGCTGTTTTGCAGGCGGGTTTGGCCACATGGCATGTTGATTGGACGTATTTGCTACATCATCTTGCTGATTGGACCATTGATCAGATATGAGGAGGTAAATTTAGCTCACCGTAAATCTCCTTCCCACCTCTTACTCAATCAGTGGTCTAATCAGCAAAGTGATGCAGGAGATACCTCCAACTAGCATTCTACATAGCCAAACCGCCTTGCAAAACTCTGGGTGTTACGCAGATAAAATTAACAAGTTCTGGGGGCTTAAATACCCAGATTTATTGTTCAGGGTGCTAGCCAGACTCTTGGACAAAGTTTAAATCGGTATTTGTGCTTTTTCATTTTTATTATATGGATAGTTGTCCAATTTAACTGGAAATTATGGGGATACTATTTTTTTTGAGATATTATTTCATATATGCCCTTTGTCTACAACTGCAATTGCGAATGTAGAATCAAACTCCAACAATAGTGCTGAAACCAGAACATCCATTTTGTTCTGCTACCTCACCCATCCAATATGAGCATGGGATTAGGGTGGTTGGACATATTAACTAGATTAGTCTGTAAAAACTAAGTGAATTCAATAAAACTTTGAATAAAGACAAAACAATACCGAGGATAAAATAATGATCTGATTAGATTTGAATGCTAGAGCTAGGCAAATATGATGGAACATGGAAAGTTCCAACAAACAATTGAGGGTGTGATTTAATTTGTTACTAACAAAGCAAACATCTGGCCACCTCAGAGTTTACTCTGGAAACACCTTGATTATTCTAAGCATATGGGTTTTCTCCTCTCCAGTGTTGTGCGAAAATGCGATGCAAGGAATTTCATAAGGTTGATCTGCTGGTCAGATGGTATTAGTTCTTGTTCTTAATTGCATCACTGTTATATGTTAGGTGTCACGATTATTCTATCTTGATGGATGTTTCAATTTAACTAGTATTGTAGGGAAAAAGGAAGCACCATAATTTGTTCCTGTTGGTTTGCTATCTTTAGTTTAATACTCCCTCCGTTTTTTAATAGATGCCACCGTTGACTTTTGAACACATGTTTGACCATTTATTTTATTCAAAAATTTTATGCAAATGTATAAGGTATAAATCATGCTTAAAGTACTTTGAGTGTTAAAACAACTCAACAAAATAAATTATAATTACATAAATTTTTTGAATAAAACAAATGGTCAAACGTGTGACAAAAAGTCAACGACGTCATCTATTTAAAAAACGGGGGTAGTATCTATTATTTTGTTAGTCCTGATATTGTGCTCTTTGACTAAGTTTCCTAGTGTGCATTGATTTTTTTTATATTATCCTGCTGACATCTCACTGATATATCATTGCCTGATACCTGCATATTTTTTTTTGACAAAGTTTCTTAGAATACATAGTTCTACCCATTATCCATAAAAACCATCATCCGATTCATTCTTTAATTTAACCGAAGCAAACAACGTGGAATTTTAATTTTCTACTCCCGGAATTGCATTGTTAGAGCTGAGCCAGGATTTCTTGGTTTCTGAAATTGAGAAACTTGTGAAATGACTCAGTTCAGAAAAAAGGAGGAGGCTTTTATGGACTAGCATGGGAACGATAAATTTGAGTGAAAACTAGTTGAATGAATTATCGTGGGATACCCCAACTATTGTCCTTGACTTTAGATACTTAACATAATTTAAGTTTATATTTTCTCGTCCTTGTCTTGGCAATTGGCATTGTACTTTTCTTCAATTATGTTGCTCAAGCATTTGCTCTATACTTAACTTCAACACTGGTGGTTTTTTAACAGTAGGTTGTCTTATACAGAAACGGCGCTAAAGCTTGACAGTTTTGTCGGCGACGTAGAAGATGCTGTTTCATCTTCTGTGACCGGAAAACTTAAATCTCGTGCAGAAAGTTCACTGGTACGAATATTGCCATTTTAGTATGGGAAAACCAACATGTCAACTGCTAAGTTTGGATTTCGTTTTTTCTCCAGAAAACATATCATGTTCCTATTGGATATCTTAAAACAATAGAAGATATTTTATCTTCAGTCACAAAGACCAGACCACAATGGACTCGCCTTGTTTCTGCAGTGGATCACAGAGTTGACCGATCTTTGGCTCTACTAAGACCACAAGCAATTGTCGATCATCGAGCTCTTTTGGCATCCCTTGGCTGGCCTCCATCACTTTCTGGAACAAATTTTTCTAGTATTAATTCTGGGAAACCATCAGAGATTGTGAACCCCTTATTTTCAATGAAGGGTGACCTGAAAAGCAAGTATTCTGAGAGCTTTCTTTCGCTATGCAGTTTGCAGGAATTGCAAAAACGTAGAAAAGCTCGACAGCTAGAAGGGCACATTGTCAACAATCAACTACGTCAACCATTATGGGTAATTGAAGAGTTAGTAAATCCAATAGCTGCTGCCGCACAACGCCATTTCTCCAAATGGGTTGAAAAGCCTGAGTTTGTTTTTGCTCTTGCTTATAAGATAACTAGAGACTTTGTAGATTCCATGGATGAGATATTACAGCCCCTTGTGGATAAAGCTAACCTTGTAGGGTATAGTTGCAGAGAAGAGTGGATTTCTGGAATGGTCATCACATTGTCGACATACTTGGTGAAAGAGATATTTCCTAAGCATATTGAACTTCTTCAGGAAATTAGCTCGGCTGATGCTAGCAGCAAACAATCTCAAGCTAGAGTCTCATGGCTTAATCTTATTGACCTGATGATATCTTTCGACAAGCAAACCCAAGCTTTGATCTCAAGTTCAGGACTCCTACTTTCGGTGAAGGATGATGATAATTGGCAGAGGATCTCGGTTCTCTCCGTCTTCTGTGATCGGCCAGACTGGCTTGAAATATGGGCAGAGATTGAGAGACAGGATACTCATGATAAGCTGAGATTATCAATGGAGAATGAGAAAAACTGGAATACAAGGTTTCAAGGAACAGTGCTTGAATATGGTTCAGATGACTATAAGTCTCCAGCAATTACCGGTGTAATCCAAAAGGGCCTGTCCTTGCTAATAGATCGTGCTCGGCCCATTCCAAATATAGCACTTAGAGCAGAATTCATTAAGATTTCTACTTCACCTTTATTATCAGAGTTCCTTGGCTGGATGCTTCAAAGGTGCCAAGAAGCAGAGGGATTAACAGCTCTGGCAGATGATAATGCTCTTCTCAAGGTATCACAGTCCATTAATGCAGCTCGATACCTTGAGTCCACATTGACAGAATGGTGCAATGATGTATTCTTTCTTGAGATGGAAAATATAGATGGCCGTAGCGAATGTATCTTCCAAGTGGAGATAAATCACCTGAAAGATTTTAGAGTACAATGGACTGAAAAGATTTCTACCGTCATTTTAAGGGATTTTGATGCCCGGTCAAGGGATTATCTGAAAAATAAAAGGCAGTGGCAGGAGAAATCAGAAGGGTTAACATTATCCAGGGCATTCGTAGAATGTTTAGACTACATGCAAGGACGGATAGCTAAGCTGGAAGATGGTCTAAATGTCCTGGATTTTGTGACTGTGTGGAGAACTGTGGCAAGTGGAGTAGACCAGCTGCTCTTTTCTGGAATTTTCAGTGGCAGCACAAAGTTTAGTAATGGCGGGGTGGAAAGACTTCATGGTGATCTGAGTATATTGTTTGCTGCTTTTTCTGCGTGGTGTATGAGGCCTGAAGGCTTCTTTCCAAGACTGTCTGAGGGATTGAAGTTATTGGATATTGATGAGAAGCAGCTAAGAGATGGAGCTTGTACAGATAACAATCGGCTGAGGGAGTATGGTATAAGGCGTTTGACGGCTGCTGAGGTTGAGAAGATAATAAAAAACAGAATCTATGAGTCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005622