BGIOSGA005629

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Revision as of 02:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005629| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005629, complete gene.| tag = OsI_089...")
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Gene Name

BGIOSGA005629

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005629, complete gene.

LocusTag

OsI_08919

Ensembl Transcript ID

BGIOSGA005629-TA

Ensembl Protein ID

BGIOSGA005629-PA

Length

2887

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33289720..33292606

Sequence Coding Region

33292256..33292606,33292100..33292162,33291671..33291781,33291456..33291530,33291307..33291375
,33291156..33291221,33290364..33290438,33290180..33290278,33289953..33290087
,33289720..33289884

Genome Context

<gbrowseImage1> name=IndicaChromosome02:33289720..33292606 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:33289720..33292606 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCGCGACCGCCGCCCCGCGCCTCCGCGCCGCCGCGTGGGGCAGCCTCTCGCCGCCGGCGCCAGTGCGGGCGCAGTTCGTGAGTCTCCCGCTCAGTCTCCCCGGCCGCTACGCCTCGCTGCGCCTGCGCGCCTCGGCGGCGGCGGCGGCGAAGGAAGGGGCGGAGGAGATGGGGTTCGAGGAGATGGCGGCCGGGACGCGGAGGCGCTACTACATGCTCGGCGGGAAGGGCGGGGTCGGGAAGACGAGCTGCGCGGCGTCGCTGGCCGTGCGCTTCGCCAACAACGGGCACCCCACCCTCGTCGTCTCCACCGACCCCGCGCACTCCCTCAGCGACTCCTTCGCGCAGGATTTGAGCGGCGGGGCGCTCGTGCCGGTCGAGGGGCCTGAGGCGCCATTGTTTGCGCTTGAGATAAATCCTGAGAAAGCCCGAGAAGAGTTTCGTGCAGCAAGTCAGAAGAATGGAGGGACTGGGGTAAAGGACTTCATGGATGGCATGGGACTGGGAGTGCTTGCTGAGCAGCTGGGGGAGTTAAAACTGGGGGAGTTATTGGACACACCACCACCAGGATTGGATGAAGCAATAGCGATTTCAAAGGTTATGCAATTCCTTGAAGCACAAGAGTATAGCATGTTTAGACGCATTGTTTTTGACACTGCTCCAACGGGCCATACACTCCGTTTATTATCCTTGCCAGATTTCCTGGATGCATCTATTGGGAAGATCTTGAAGCTTAGGAGCAAGATCGCTTCTGCAACATCAGCTATTAAATCAGTTTTTGGACAAGAAGTTCAACAGCAGGATGCAGCAAACAAATTGGAGCAGCTGAGAGAAAGGATGGTCCAAGTGCGAGAACTTTTTCGTGACACAGAATCAACTGAATTTATAATTGTGACTATTCCAACAGTGATGGCAATAAGTGAATCAGCAAGACTACATTCTTCCCTAAGAAATGAGAGTGTTCCCGTTAAGAGACTCATTGTTAACCAAATTCTACCACCTTCGTCATCAGACTGTAAATTCTGTGCTATAAAAAGAAAGGGCCATTTACCATCTTCTTTCATCCAGGATCAAACACGTGCTTTGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCACCTCTTGTCGACATGGAAATAAGAGGCGTTCCTGCTCTGAAGTTTTTGGGCGATATAGTATGGAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MLATAAPRLRAAAWGSLSPPAPVRAQFVSLPLSLPGRYASLRLRASAAAAAKEGAEEMGFEEMAAGTRRRYYMLGGKGGVGKTSCAASLAVRFANNGHPTLVVSTDPAHSLSDSFAQDLSGGALVPVEGPEAPLFALEINPEKAREEFRAASQKNGGTGVKDFMDGMGLGVLAEQLGELKLGELLDTPPPGLDEAIAISKVMQFLEAQEYSMFRRIVFDTAPTGHTLRLLSLPDFLDASIGKILKLRSKIASATSAIKSVFGQEVQQQDAANKLEQLRERMVQVRELFRDTESTEFIIVTIPTVMAISESARLHSSLRNESVPVKRLIVNQILPPSSSDCKFCAIKRKGHLPSSFIQDQTRALDMIRNDPELMGLNLIQAPLVDMEIRGVPALKFLGDIVWK</aaseq>

Gene Sequence

<dnaseqindica>1..351#445..507#826..936#1077..1151#1232..1300#1386..1451#2169..2243#2329..2427#2520..2654#2723..2887#ATGCTCGCGACCGCCGCCCCGCGCCTCCGCGCCGCCGCGTGGGGCAGCCTCTCGCCGCCGGCGCCAGTGCGGGCGCAGTTCGTGAGTCTCCCGCTCAGTCTCCCCGGCCGCTACGCCTCGCTGCGCCTGCGCGCCTCGGCGGCGGCGGCGGCGAAGGAAGGGGCGGAGGAGATGGGGTTCGAGGAGATGGCGGCCGGGACGCGGAGGCGCTACTACATGCTCGGCGGGAAGGGCGGGGTCGGGAAGACGAGCTGCGCGGCGTCGCTGGCCGTGCGCTTCGCCAACAACGGGCACCCCACCCTCGTCGTCTCCACCGACCCCGCGCACTCCCTCAGCGACTCCTTCGCGCAGGTCGCCTCCCCCGTCGAGCACCTGCTGTCTCGGTTCGAGGTTTCTTGTGTGCGTACTGCGTAGCTAACATCACTTCCTGCCTGCTCATTTTAGGATTTGAGCGGCGGGGCGCTCGTGCCGGTCGAGGGGCCTGAGGCGCCATTGTTTGCGCTTGAGGTGAGCAGTATTAGTATATGAAAATCTTAGGGCATCCATTTGCTTTGAGAAGCTTTGGGCTATGCAACATAATCATTTAGATTGTAATAAAGTGTTAGCATATGAACATCGTAGAGAACATCCATTTTGCTTTGAGAAACTTTGAGCTATGCAATATAATCATTTAGCTTCTACAGTAATAAGCTGAAAACCTCTACCTGTGAAATTCTAGGATTTGTTTGGAATCAGAATGATTTAATTTAGATCAACCTTCTGATTGACTTACTCTAGATCGATATAGATAGTGCTTGAGTGTGGCATATTCGAGTTTTAATGCAGATAAATCCTGAGAAAGCCCGAGAAGAGTTTCGTGCAGCAAGTCAGAAGAATGGAGGGACTGGGGTAAAGGACTTCATGGATGGCATGGGACTGGGAGTGCTTGCTGAGCAGGTGAAAGGCTGCATATCTGTTTACTGTCGCTCTCTGTATTTCATCACCTCCCATTATGTCTGAATGTTGTGGTCCTTGTGTTCGTGAATTTGCCTGAATTGCTTTGTTTAACTTTGGTATTACCATCTTATTCCATATAGCTGGGGGAGTTAAAACTGGGGGAGTTATTGGACACACCACCACCAGGATTGGATGAAGCAATAGCGATTTCAAAGGTGAGAAAAAGCAGGTCATGGGCTTTACCTGGTTCATCTTGTTGTTCTTCTTCTAGCATGTGACTCCTACTTGCATCCAGGTTATGCAATTCCTTGAAGCACAAGAGTATAGCATGTTTAGACGCATTGTTTTTGACACTGCTCCAACGGTAACTATCCTATATATGTGAATCCACAATTGACTCCATACGCACATTCACATTATTACCTATGATTTGTCTCCCTCATCAACAGGGCCATACACTCCGTTTATTATCCTTGCCAGATTTCCTGGATGCATCTATTGGGAAGATCTTGAAGGTATTATTTGCTTGATTGCTTCTGCACCTTTTGCTATCATGCGACGATGTAAGGCCTGCAGTACATACATAATTGATGAAGAAAATGTGTATTATCTTGTGTAACTATTATCCTGCCTATCGTCACACAAAACAAAGTCATTTTAGAATGTGTGTAGTCAACACAAGTTAACTTTGACCATAAATATCACTTAAAATATAGGTTTTGGGGCTATGAAAAATGATATATTTAAGTTTGCCATAACAAGAGATTTCATAATACTACACTTATGTAACCTTCTTTTAAAAAAAATGCTAAAGAACTAGGTAGTCAAAGTTGTATAATGGTGACCAGAGAGAGTAGCCACTACAATCTTGTTATTTTTGTGGCTAAATGGTAGCGGGAAGCTTATTGCATTTCTGCTATTATTCATTTGTGTTCGTTTGCGCAGCTTCAGATTGTGCTTTTTTTTTGTTAACTTGTGAAATTGGAAGGCTGCCTATCTTGTTGAATATTTATCTGCTCAAATACATTGTTTACATCTTTTTCATCAGAGTTTTTTAGACACTTGTTAGAAGAAACCGCTTATCCTTGTTCTGCTTCATATGATGAAATATCATGTCTCTGGAATTTAATAAGGAATTAATGCAAAGTTATTCTTCAAGTCCTGTTACCAAGAGCTAGGCATTCCATCTAAGTTGTGGTTTGTCATACTGATTTATCATCTTTTTTTTCCAGCTTAGGAGCAAGATCGCTTCTGCAACATCAGCTATTAAATCAGTTTTTGGACAAGAAGTTCAACAGCAGGATGCAGTAAGTATTTGCCTAAAATTCCTCTGAACTTGGTGTTTCTTCACCATGTCTTTAAACCTTTGAATTTGTTATTCTCCCCCTTAAGGCAAACAAATTGGAGCAGCTGAGAGAAAGGATGGTCCAAGTGCGAGAACTTTTTCGTGACACAGAATCAACTGAATTTATAATTGTGACTATTCCAACAGTAAAGATTCTGTGTATCCATTCCCCCACCACCTTCTGTATGTATTTATCAGTGTAATAGCCATCTTTATATTTCCTTTTGGCATTTTTCAGGTGATGGCAATAAGTGAATCAGCAAGACTACATTCTTCCCTAAGAAATGAGAGTGTTCCCGTTAAGAGACTCATTGTTAACCAAATTCTACCACCTTCGTCATCAGACTGTAAATTCTGTGCTATAAAAAGAAAGGTAGAGTTCATAATCTGCCGAAATGATTCTCTAGTAATTGTCTGCTGCTTGTAGAAACTGTGTTGCAGGGCCATTTACCATCTTCTTTCATCCAGGATCAAACACGTGCTTTGGATATGATAAGGAATGATCCAGAGCTAATGGGGCTGAACTTAATCCAAGCACCTCTTGTCGACATGGAAATAAGAGGCGTTCCTGCTCTGAAGTTTTTGGGCGATATAGTATGGAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005629