BGIOSGA005640

From RiceWiki
Revision as of 02:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005640| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005640, complete gene.| tag = P0585G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005640

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005640, complete gene.

LocusTag

P0585G03.23

Ensembl Transcript ID

BGIOSGA005640-TA

Ensembl Protein ID

BGIOSGA005640-PA

Length

4528

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33128466..33132993

Sequence Coding Region

33132453..33132993,33131772..33131971,33131490..33131670,33130654..33130845,33130000..33130232
,33129742..33129843,33129559..33129609,33129096..33129200,33128466..33128564

Genome Context

<gbrowseImage1> name=IndicaChromosome02:33128466..33132993 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:33128466..33132993 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGATCCCTCCTCCACCTCCAAGGGCAAGCGCAAGCGCGGCCGCAAGCACAAGGCGGCCGCCGAAAACCACGCGCCCGCGTCCCCCGTGGCCGCCACCGCCGCCGACAACCCCGCGCCGGCCGCCGCGGGCCGCCGGGGCCAGAAGTCGCGGCGCCACGAGGCCCCGGCCGACGCGGACGGGTCGCGGCCGCCGTCCCCGCCCCGCCGCGGGGAGGCGAAGCCCGTGGCGAATGGAGGAGGGGACGCGGTGGTGGAGGCGGGGGGACCCGTGGGCTGGGACGAGGTCGCGAGGGTGGTGCCGTCCATGGACGCCGTGGTGAAGGTGTTCTGCGTGCACACGGAGCCCAACTTCTCCCTGCCGTGGCAGAGGAAGCGGCAGTACAGCTCCAGCAGCAGCGGCTTCATCATCGGAGGCCGGCGCGTCCTCACAAACGCCCACTCCGTGGAGCACTACACCCAGGTCAAGCTTAAGAAGCGCGGCTCCGACACCAAGTACCTGGCCACGGTCCTCGCCATTGGGACGGAGTGCGACATTGCGCTGTTAACTGTCGATGATGATGAGTTCTGGGAAGGAGTTTTGCCTGTTGAGTTTGGATCACTGCCAGCACTTCAGGATGCTGTGACTGTTGTTGGTTATCCAATTGGAGGAGACACAATATCTGTGACAAGTGGGGTGGTCTCCAGGATAGAGATACTTTCATATGTTCACGGTTCTACAGAACTTCTAGGATTGCAGATAGATGCAGCTATTAACTCAGGAAATTCAGGTGGCCCAGCTTTTAATGACAGGGGCAAATGTGTTGGTATAGCTTTTCAATCTCTCAAACATGAAGATGCAGAGAATATAGGTTATGTGATACCCACCCCAGTTATTATGCATTTCATTCAAGACTATGAAAAGTCTGGAGAATATACAGGATTCCCTATACTTGGAATAGAATGGCAGAAAATGGAGAATCCTGATCTCCGCAAAGCGATGGGAATGAAACCTGATCAAAAGGGTGTTCGTGTTCGAAGAGTGGAACCAACTGCTCCTGAGTCTGGATGCCTGCAACCATCAGATATTATTCTTAGCTTCGATGGTATTGACATTGCCAATGATGGTACAGTTCCTTTCAGGCACGGCGAGCGCATTGGCTTCAGTTATCTTGTTTCCCAGAAATATACTGGCGAGAAGGCCCTAGTTAAAGTCCTGCGCAATTCGAAAGTCCATGAATTTAAAATAAAGCTAGCAACACATAAGAGACTTGTTGCAGCTCATGTAAAGGGCAGGCCACCATCATATTACATTGTTGCTGGCTTTGTTTTTGCTGCGGTTTCTGTTCCATATCTTAGATCCGAGTATGGAAAGGACTATGAATATGATGCACCTGTCAAGTTGTTGGTCAAGCATTTACATGCAATGGCCCAATCACCTGATGAACAGCTGGTGGTGGTATCACAGGTGCTTGTAGCAGATATCAATATCGGTTATGAAGAGATTGTCAATACTCAGGTCCTTGCTTTCAATGGTCAGCCTGTGAAGAATTTGAAGAACTTAGTGTCAATGGTTGAAAATTGCAAGGATGAATTCTTGAAGTTTGATCTGGAGTATGACCAGATTGTTGTCCTTGAGACAAAAACTGCGAAGGCTGCGACACAGGACATTCTGACAACACACTGTATACCGTCGGCAATGTCTGATGACCTGAAGACCTAA</cdnaseq>

Protein Sequence

<aaseq>MDDPSSTSKGKRKRGRKHKAAAENHAPASPVAATAADNPAPAAAGRRGQKSRRHEAPADADGSRPPSPPRRGEAKPVANGGGDAVVEAGGPVGWDEVARVVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIALLTVDDDEFWEGVLPVEFGSLPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLKHEDAENIGYVIPTPVIMHFIQDYEKSGEYTGFPILGIEWQKMENPDLRKAMGMKPDQKGVRVRRVEPTAPESGCLQPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGEKALVKVLRNSKVHEFKIKLATHKRLVAAHVKGRPPSYYIVAGFVFAAVSVPYLRSEYGKDYEYDAPVKLLVKHLHAMAQSPDEQLVVVSQVLVADINIGYEEIVNTQVLAFNGQPVKNLKNLVSMVENCKDEFLKFDLEYDQIVVLETKTAKAATQDILTTHCIPSAMSDDLKT</aaseq>

Gene Sequence

<dnaseqindica>1..541#1023..1222#1324..1504#2149..2340#2762..2994#3151..3252#3385..3435#3794..3898#4430..4528#ATGGACGATCCCTCCTCCACCTCCAAGGGCAAGCGCAAGCGCGGCCGCAAGCACAAGGCGGCCGCCGAAAACCACGCGCCCGCGTCCCCCGTGGCCGCCACCGCCGCCGACAACCCCGCGCCGGCCGCCGCGGGCCGCCGGGGCCAGAAGTCGCGGCGCCACGAGGCCCCGGCCGACGCGGACGGGTCGCGGCCGCCGTCCCCGCCCCGCCGCGGGGAGGCGAAGCCCGTGGCGAATGGAGGAGGGGACGCGGTGGTGGAGGCGGGGGGACCCGTGGGCTGGGACGAGGTCGCGAGGGTGGTGCCGTCCATGGACGCCGTGGTGAAGGTGTTCTGCGTGCACACGGAGCCCAACTTCTCCCTGCCGTGGCAGAGGAAGCGGCAGTACAGCTCCAGCAGCAGCGGCTTCATCATCGGAGGCCGGCGCGTCCTCACAAACGCCCACTCCGTGGAGCACTACACCCAGGTCAAGCTTAAGAAGCGCGGCTCCGACACCAAGTACCTGGCCACGGTCCTCGCCATTGGGACGGAGTGCGACATTGGTATGATTTCCCCTTCTCTGCTGCAACCTGCATTGTTTTTTCCTTCTCAATTGTTGCAATTGTAGTACTTATCCAATGCTTCCTAAGATTGCTCCAATAGCATGGTGTGTGGCCCGAGTACTGGTATCTAGTTGTGGATAGTGGAGAAATAATAGCATTTGGAATAGGGTTCCACATATTCGGAAAACATGGATTTGAGAATGCTGAACCCTGTGCAACATTGATCATATTTTGTAAAGATGAATACTTATGCTTGTTTTTCTGGGTAATGTCAGCTCTTGGAACTGGCTACAGGTTTGAAACTTTCAATTTGAAAATGCCATTGTTGCAAGAATAGGTATAGGAGAATGTATGGTTGCTTTTTCTTCTTCTGGGAATAGATTGTAGATTAAAACAGGGAAGCTCTATTTGTTTAATGTGTACAGACAAATGAATTTCATATTTTATCTGGTCTCAATTTGTAATGGTTGATCGATCTCAGCGCTGTTAACTGTCGATGATGATGAGTTCTGGGAAGGAGTTTTGCCTGTTGAGTTTGGATCACTGCCAGCACTTCAGGATGCTGTGACTGTTGTTGGTTATCCAATTGGAGGAGACACAATATCTGTGACAAGTGGGGTGGTCTCCAGGATAGAGATACTTTCATATGTTCACGGTTCTACAGAACTTCTAGGATTGCAGGTTCATTTTCTCCCCACAATTCTCATTTAGAATAGTATTATCTGTGAGGATAACATGTTGAGAAATCATAAGTCTTTTAACCTTTGGGGTTTTATGGACAGATAGATGCAGCTATTAACTCAGGAAATTCAGGTGGCCCAGCTTTTAATGACAGGGGCAAATGTGTTGGTATAGCTTTTCAATCTCTCAAACATGAAGATGCAGAGAATATAGGTTATGTGATACCCACCCCAGTTATTATGCATTTCATTCAAGACTATGAAAAGTCTGGAGAATATACAGGTAAATGCTATACAACGTAATTGCATGAATATGCCATTTACTTCTATTGTATGATCATGGCCCTTCTTCTTTTCTTTTAGTATAATTACCTCTGTTTGGGTATTAATTTGTGCCTATAACTAACCAGTTTAGTATAATTCACTGATGATATTGATAGGCATAATCTGTAGCTTGGTATAAATCTGACTGTTCCTTGTGACCGAACCAGCATTGGACAATGATTGATTTATTTTCGCAAATGGCCTCATACGGAGTTTTCTCCCTTCTAATGATTTCCGTGGTCATCTTATGATTGATGTGCTCTAATGTTGGTTCATTATCATGAAATAAATTGATTGTGACCAGTGTACAGCCAAAAGAAGTTCTACATAGTTTATTTTCATGTTCTCATTTTGTCAATGCATTATCCAATATTTGCAGTTCCTTTGGTTGAAGAGTATATTTTCCTTATTGATCTTTTGAGCCAAGTGACAGTTATTTCTTTATTATTAATAAATACTGGTTGTTTTGGTTTTTATCTCATGTCAACCTTTTAAATGACACCCAGTCTATGGTTACCACTTCTATCTTTCTGGTATTTTACATTTGCCACGTGGTTTTTTGAAGGTTCCGTTATTTAATATCTTCATGTATTATAATTTCAGGATTCCCTATACTTGGAATAGAATGGCAGAAAATGGAGAATCCTGATCTCCGCAAAGCGATGGGAATGAAACCTGATCAAAAGGGTGTTCGTGTTCGAAGAGTGGAACCAACTGCTCCTGAGTCTGGATGCCTGCAACCATCAGATATTATTCTTAGCTTCGATGGTATTGACATTGCCAATGATGGTACAGGTCAGTCGCACTTTCTCAAACCTTGAACTTTTGACTCTTTCTGGAATGGTGTTTGTTGCATCCAATGCCCTGTAATTTTGATAAGTGCACCTCATACATGACTTATCAGCATGTCTTTTAAGTCTTTGTTAGACTTGTACGGGACCGTTTGTGTTGCCTGCATTTGCCTTTTTACTTTCTATTTATTGTTTGTGTATGGCTGTATTTTCTAAGCTCTGGCAATAGATAGTCTACATGAATTTCTTGAAGTCATAATCTAGATAGCTTAGAAAAACTTCATTTACAAGGTGTCAAATTTCCATGTAGAGCCTAAACAATTAGTCTTGTTTACATTTGAAAAGTTTTGATGTCAACTTCCTAACCATTTAGAAAATAGATCTAATATTGTCATATTTTCTGACAAATCTTGTTGTGTAACCAGTTCCTTTCAGGCACGGCGAGCGCATTGGCTTCAGTTATCTTGTTTCCCAGAAATATACTGGCGAGAAGGCCCTAGTTAAAGTCCTGCGCAATTCGAAAGTCCATGAATTTAAAATAAAGCTAGCAACACATAAGAGACTTGTTGCAGCTCATGTAAAGGGCAGGCCACCATCATATTACATTGTTGCTGGCTTTGTTTTTGCTGCGGTTTCTGTTCCATATCTTAGATCCGAGGTTTATATCTACATTCCCTTTTCATTTTGTTTCTATTGTATCGAATAATTATCAAAATGTTCTAAATCATTTTTACAATATCCTAGCTATAGCAGCCCTTATACTGTTCAGTGATATTATTTATTTAACTCTGAGCTTTTCTGTGTTGCTTACCAGTATGGAAAGGACTATGAATATGATGCACCTGTCAAGTTGTTGGTCAAGCATTTACATGCAATGGCCCAATCACCTGATGAACAGCTGGTGGTGGTATCACAGGTTATGAGTTCTTCATGCTTAATTGTTCATTAGAAGTTCCTGTTAGTCTTGGGCAATCATTTCCTTCCATAATAGGCTAGGTTTTAGAAGGTTCTTTAATTAACTTAATGACATGCTATGATCTCTTTGCAGGTGCTTGTAGCAGATATCAATATCGGTTATGAAGAGATTGTCAATACTCAGGTAATACAAACAGTCAGCTGATATAAATTACTCAATTTTAATTTATTCTGTTGGCTTGCTCCAGTCATATTGTTGTTTAAGGCTTGAAGCTATATATATCTGCAGTATATAATGCTATCAATTAACATGCATTTGTTGATTTGTTGTTAGTCCTCTTGTCTAATTAATATATTTTCCTTCGTGTCTATGCATTGAGTGCTACACTGCAACGTCTGAAAGTTGCATCACAATTCTCAAGATCTCATTGATTCTCCTGTTGTTTCTGAAAGCCAAAACAACTAGCACTATGATATTTGTAATGCCTTTCCATCCTTATTTTTGGTGAATGGTGATAAAGCATGTTTACTACTGTCAATAGGTCCTTGCTTTCAATGGTCAGCCTGTGAAGAATTTGAAGAACTTAGTGTCAATGGTTGAAAATTGCAAGGATGAATTCTTGAAGTTTGATCTGGAGTATGACCAGGTATCCCCAGGTCCCTTCTTGTTTGGACCTTTCTATAAACATCTCGCATATCAACCCCACATATTAAAATCCCTTCGAAAACTTGCATCTACCAGCTAGTACTTTTTACTCAAAAAAAGTTGCTTAGGCCCCTTTGAATCAAAGGATTTATGTAGAAATTTCATAGGATTCAAATCCCATAGGAAAATTTCCTATTTGGCCCTTTGATTTAAAGAATTGAAGCTTTCCAGATCCTATGAAATTCCTATGGAATGGCACATTGCATGTGGATTATGGAGGAAATTTAACAAGAGCTCCAACCTCTTAGAAAATTTCCTTTGAGTCTATCTATCTCATCCGATTCCTGTGTTTTTCCTACGCTCCAATCAAACGACCATTCTTGTGTTTTTCCTGTGTTTTGCAATCATCTTTTTTACACTTCAATTCCTGTCAGAATCATGTGTTTTTACTATTCCTCCGTTTTTTCTATCCTGCGATTCAAAGGGGCCCTTAGTTTGGCTGACATTACTTAACTAATGTATGATTTGACAGATTGTTGTCCTTGAGACAAAAACTGCGAAGGCTGCGACACAGGACATTCTGACAACACACTGTATACCGTCGGCAATGTCTGATGACCTGAAGACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005640