Os12g0516300

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0516300| Description = Disease resistance protein family protein| Version = NM_001073421.1 GI:115488803 GeneID:4352347| Length = 5361 bp| ...")
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Gene Name

Os12g0516300

Description

Disease resistance protein family protein

Version

NM_001073421.1 GI:115488803 GeneID:4352347

Length

5361 bp

Definition

Oryza sativa Japonica Group Os12g0516300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20206329..20211689

Sequence Coding Region

20207893..20209882,20210299..20211101

Expression

GEO Profiles:Os12g0516300

Genome Context

<gbrowseImage1> name=NC_008405:20206329..20211689 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:20206329..20211689 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacatcgccacaggggcaatgaacaccctcctccccaagcttggggagctgctggttggcgaatacaagctgcaaaagggtgtcaagggagagatcgaagaacttgagaaagagttgaaaggtatgaccgcagcactccacaaggtggctgagacacctgtggatcaacttgaccagcaggtcaagatctgggccagcgaggtgagagagctatcttacgacatcgaggatgccatcgacaccttcatgttaaagtgcaaggggcatgaacctgccacgagcttcaagaaggtcaccaatttgttcaacaagttcaaaaccaaccatcagatccacggtgtcatgaaagacatcatggaccaggtcaagaaggtcagcgaacgtcgtgataggtacatagtcgacgacaatgctgccaggccaactgttgtggatgttgattctcgcctagaagctatgtaccgaaaggcgacagaactcattggcattagcaagccaaaaaatgagctaactaagcaactcttggaatatgacggctcatccagccaacaatcaaatataatttctattgttggattcggaggcttaggaaagacaactcttgccaattcattatttcaggagcttaaggcaaaatttgacagctattgttttgtttcggtgtccttgaatcctgatataaacaagattctcaagaacattcttctccaacttgatgagaaaatgtattcccacatagatgaaacatgggaaacgaagcagctcatcgacaaaattagagacttcctcaacaatagaaggttcttgtgcgtgattgatgatgtatggaaaaaatcagcgtgggatactatcaaacttgctgtgcaagatgctaaacttggtagcaaaataattgtaaccacgcgaaacaaggtcgttgcagaacatgcaggcagtggtgtttatgaaatgaaacccttatctgatgatgattccagacaattgttctgcaaacgaatatttgactctaacgatgactgtcctgctgatttgtgtggtgtcactgagaaaattttgaagaaatgtggtggtgtaccgctagcaatcatcactacagcatgcctacttgctagcaaaccaaggaattcagaggaatgggacaaggtcaataagtctatcagtttggggcttgagaacaaccttgatgtggacaagatgcggaagatattaagcctcagttacaacgatctaccttttcatttgaagacttgcttgttgtctctaagcaaatatcctgaggatgaactaattagaaaagatgttttgatatggggttggttagctgagggttttattacagatgaaacacgacctgtagggacaagcttgcaggagattggagagagctacttcaacgagctcatcaatcgaagcttgatccagccgatgagtgaggacaatttttgggatgaagatggtaaggtgcatgttttttgggatgaagatggtaaggtgcatgcatgcaaagtacatgacatggtgcttgagctaataaatcagctgtcagtagaagaagattttgttacaacgtatttatcagatggtcaacaaacaggtaaacatacatgtacagcacaaaagaagaagattcgccgattatctctccataacagcaataaatcctatgcctcaccagaagcaagagaacaattgtccaaagtaaggtccattactatcttcggcaaggtcgactcgataccacccttgtcgagctttcatgtcctgcgtgtgttgcagcttgaggactgcagtggaatggacaagaaccatcttaatcatctcgataagctacgcctcctaagatttctgcgtctagggcactatagtgccactgagctccctgaaagcattgggaaactggaatctctcgaaaccttggacataagaggtgcacgtaaaccaagttcttttaaatctcataaggtactgtttccaatgtcttttgccaaactaaggaaactgttgcggctatatgctggcagagtgaagctggcgcaaggtctgatgctggggaatatgaaatctttacaggagcttgtaatagaagctacccgaaaggtaataaaagagattggtaatttgacagagctaaggactcttaggatcgttttcggtagtgaaaaaacatttgagttaaaggaatccattcaaacgtctatacaaaggctcaccaatttgcaagacctagatttgagaaataatattagttttgaagaaatcatagacatgcaacaggttccttccggtctccaaaggttgttcatgcccgattcgtttatgaaagcattcccatgttggatcaattcattgatgctctcccacctcaccaccttatccatttgtctggatttcgaatatctccagtctgaccaccttgatcgcctcgctgagcttccatctcttcgctttctcaggctacagttagcatttgtttcggaacaactacaggaaaagctcactatccacagaggtgcatgtgcatttcggagtttaaaagattttcagttttatagctccatgatgccatcgtttcaaccaggagctatgccccaccttgaaaggctttatctttctatttggaccagactaaggaggggtggcttaaatgatttaggtttggagaatctctactcccttcggcatgcaaccatttattcctttgatgatgacagcaaggctgttattgaagaggcacttaaggactatcctaatcaagcagcgctcaaaatacaatcgatgatgatgaactaa</cdnaseq>

Protein Sequence

<aaseq>MNIATGAMNTLLPKLGELLVGEYKLQKGVKGEIEELEKELKGMT AALHKVAETPVDQLDQQVKIWASEVRELSYDIEDAIDTFMLKCKGHEPATSFKKVTNL FNKFKTNHQIHGVMKDIMDQVKKVSERRDRYIVDDNAARPTVVDVDSRLEAMYRKATE LIGISKPKNELTKQLLEYDGSSSQQSNIISIVGFGGLGKTTLANSLFQELKAKFDSYC FVSVSLNPDINKILKNILLQLDEKMYSHIDETWETKQLIDKIRDFLNNRRFLCVIDDV WKKSAWDTIKLAVQDAKLGSKIIVTTRNKVVAEHAGSGVYEMKPLSDDDSRQLFCKRI FDSNDDCPADLCGVTEKILKKCGGVPLAIITTACLLASKPRNSEEWDKVNKSISLGLE NNLDVDKMRKILSLSYNDLPFHLKTCLLSLSKYPEDELIRKDVLIWGWLAEGFITDET RPVGTSLQEIGESYFNELINRSLIQPMSEDNFWDEDGKVHVFWDEDGKVHACKVHDMV LELINQLSVEEDFVTTYLSDGQQTGKHTCTAQKKKIRRLSLHNSNKSYASPEAREQLS KVRSITIFGKVDSIPPLSSFHVLRVLQLEDCSGMDKNHLNHLDKLRLLRFLRLGHYSA TELPESIGKLESLETLDIRGARKPSSFKSHKVLFPMSFAKLRKLLRLYAGRVKLAQGL MLGNMKSLQELVIEATRKVIKEIGNLTELRTLRIVFGSEKTFELKESIQTSIQRLTNL QDLDLRNNISFEEIIDMQQVPSGLQRLFMPDSFMKAFPCWINSLMLSHLTTLSICLDF EYLQSDHLDRLAELPSLRFLRLQLAFVSEQLQEKLTIHRGACAFRSLKDFQFYSSMMP SFQPGAMPHLERLYLSIWTRLRRGGLNDLGLENLYSLRHATIYSFDDDSKAVIEEALK DYPNQAALKIQSMMMN</aaseq>

Gene Sequence

<dnaseqindica>1808..3797#589..1391#cctctcattattctatcctcttcggctggagcaagcttgactccaggtctcccacccgttgacccgagctcccctactctcgccgccggccgcttccaccacggcatcgatcgatcgcgggcgacgtggctgagtggcggcggacccgattcgcggcgcagcaagggcggggcggagcggagcggagccagcgacggcgcgaccgcatccactgtcccgatcgacctccgattccggtacggcccggttgatccagatgctgattttctccatgtgtgtttgggcgtcgttgcttggtccttcctgttactagtataccgtacagcgttgagaggtcgctatcttgcgctgctcacggtgatgagctttgcttggatcgattaggtgatgcagcacacggttgttacctcaatctagtctcgatttgacatgctacatagcagcttaattattcagatgtcgtttttctccatgtttttgcggttgcttgatcattcctgaatcctgatacatactaataaactcaagaggctcatttaagtgcatctgtgtgtacccgtgcaggcattcaacatcagataggccaagatgaacatcgccacaggggcaatgaacaccctcctccccaagcttggggagctgctggttggcgaatacaagctgcaaaagggtgtcaagggagagatcgaagaacttgagaaagagttgaaaggtatgaccgcagcactccacaaggtggctgagacacctgtggatcaacttgaccagcaggtcaagatctgggccagcgaggtgagagagctatcttacgacatcgaggatgccatcgacaccttcatgttaaagtgcaaggggcatgaacctgccacgagcttcaagaaggtcaccaatttgttcaacaagttcaaaaccaaccatcagatccacggtgtcatgaaagacatcatggaccaggtcaagaaggtcagcgaacgtcgtgataggtacatagtcgacgacaatgctgccaggccaactgttgtggatgttgattctcgcctagaagctatgtaccgaaaggcgacagaactcattggcattagcaagccaaaaaatgagctaactaagcaactcttggaatatgacggctcatccagccaacaatcaaatataatttctattgttggattcggaggcttaggaaagacaactcttgccaattcattatttcaggagcttaaggcaaaatttgacagctattgttttgtttcggtgtccttgaatcctgatataaacaagattctcaagaacattcttctccaacttgatgagaaaatgtattcccacatagatgaaacatgggaaacgaagcagctcatcgacaaaattagagacttcctcaacaatagaaggtacatttctatgttatacctaccttttatcattatttgaagataccttttgttgtacgaataagagtcctggctcaagtttttattgtattctaatataaccgggaatcctagctcaagtttttatactattataatataactggcttgtaaataaagttttggttttccaatggaacacatagttattcagaaatctgccctatttacgcataattaagtatctttgtaactttgtgaatagaaattcacaaagctgcacttattgtgtcaaaattgttggaaaattacacatttaaagctgcacatcattttcgatattcaatgtgcaagatacatattcctatcttttttggacaggcttcacatgatttatatctaggttcaataacatgtgtatatgctaccatctttaggttcttgtgcgtgattgatgatgtatggaaaaaatcagcgtgggatactatcaaacttgctgtgcaagatgctaaacttggtagcaaaataattgtaaccacgcgaaacaaggtcgttgcagaacatgcaggcagtggtgtttatgaaatgaaacccttatctgatgatgattccagacaattgttctgcaaacgaatatttgactctaacgatgactgtcctgctgatttgtgtggtgtcactgagaaaattttgaagaaatgtggtggtgtaccgctagcaatcatcactacagcatgcctacttgctagcaaaccaaggaattcagaggaatgggacaaggtcaataagtctatcagtttggggcttgagaacaaccttgatgtggacaagatgcggaagatattaagcctcagttacaacgatctaccttttcatttgaagacttgcttgttgtctctaagcaaatatcctgaggatgaactaattagaaaagatgttttgatatggggttggttagctgagggttttattacagatgaaacacgacctgtagggacaagcttgcaggagattggagagagctacttcaacgagctcatcaatcgaagcttgatccagccgatgagtgaggacaatttttgggatgaagatggtaaggtgcatgttttttgggatgaagatggtaaggtgcatgcatgcaaagtacatgacatggtgcttgagctaataaatcagctgtcagtagaagaagattttgttacaacgtatttatcagatggtcaacaaacaggtaaacatacatgtacagcacaaaagaagaagattcgccgattatctctccataacagcaataaatcctatgcctcaccagaagcaagagaacaattgtccaaagtaaggtccattactatcttcggcaaggtcgactcgataccacccttgtcgagctttcatgtcctgcgtgtgttgcagcttgaggactgcagtggaatggacaagaaccatcttaatcatctcgataagctacgcctcctaagatttctgcgtctagggcactatagtgccactgagctccctgaaagcattgggaaactggaatctctcgaaaccttggacataagaggtgcacgtaaaccaagttcttttaaatctcataaggtactgtttccaatgtcttttgccaaactaaggaaactgttgcggctatatgctggcagagtgaagctggcgcaaggtctgatgctggggaatatgaaatctttacaggagcttgtaatagaagctacccgaaaggtaataaaagagattggtaatttgacagagctaaggactcttaggatcgttttcggtagtgaaaaaacatttgagttaaaggaatccattcaaacgtctatacaaaggctcaccaatttgcaagacctagatttgagaaataatattagttttgaagaaatcatagacatgcaacaggttccttccggtctccaaaggttgttcatgcccgattcgtttatgaaagcattcccatgttggatcaattcattgatgctctcccacctcaccaccttatccatttgtctggatttcgaatatctccagtctgaccaccttgatcgcctcgctgagcttccatctcttcgctttctcaggctacagttagcatttgtttcggaacaactacaggaaaagctcactatccacagaggtgcatgtgcatttcggagtttaaaagattttcagttttatagctccatgatgccatcgtttcaaccaggagctatgccccaccttgaaaggctttatctttctatttggaccagactaaggaggggtggcttaaatgatttaggtttggagaatctctactcccttcggcatgcaaccatttattcctttgatgatgacagcaaggctgttattgaagaggcacttaaggactatcctaatcaagcagcgctcaaaatacaatcgatgatgatgaactaactcaggtactaagctgatttcttcccctaatcaacaaccttttttttcatgtactagccattatataatgctaggtccaccaagcctcccactcaacgtttaatactcgtatgatgtatctttatgaacgttaattttttctgtctttgcttggtgcacagtaatgcatgatggcctatgtacgtctttgatgcagctgccaggttattcattatcttaaaaaaaaccaaaaaactctttatgaacgttagcatatcagcgtgcaatcaacttcttactcctagttatacattccttttttcccctccccctatatcgttacgtaagagaattgttatattgagatgatttcttttatgccattgcagtcaagtgtcaactatgttacgtaatctgacatctcattgtaaataatgcttatattaaaaaaaaacaagatttggagggagaaacatccatccaaagtttttttttcaagaaattacgagtatgttagggattgaacacgtgatctcagggttgaaaccatacacctcttaccactgcagtatcaagtgcatctctaaataatgcttatatgcgtgggtcactccaagttaatttccaactagccaaatttctgcatatttgcatggttagatatttgcatggttttttttatctgtacggcacaaataatcattcaattgagacttttttttttaccttgtactccttttcacactacaaatcgatgaagggttttttcctaaatcaaacttattcaagtttgatcaaataacaacatttccaaagcaaagtaaaatacgataaaaatatattcaatagtagatttaataaaaactaacttggtgttgcaggcgtcttactcgtcatgtaattatggtcattcagtatcacctgcaatctatcatcgtaagcccaacaagggagcacacgaacaacaggcgatgcaacagagtgggtgaaattatcagtttatctatctatctatctatctatctatctatctaccagttgttttggttgtttccattccatgaaattagaatggagttgtttagttggctctctataaagagcagtactatgttatttggaattcaagcaagaagatataagaccctgttagttttcatattattcatggtgggattgttgaaatggattatttactccacggattgaaatatatattctccactgcatttgttagatcacttgttttaagttatatgttaagtttatattttttaaatatttaatgtattatacaagagctcgatgtgcatatccatgtaagaaaaaaaggatagctggtttggctgcttgaagctgcaagagctattaggagtctgtgccacccagaatgcgctgcatgacattggtaaggttcattagagttgtgattgaggatgaacgggtgctgattctgcatttttatgcagcaaatctctaatgctctagcagtgtttcatattcattattgttttggtgtatgtacttcaatgaattgtttcaacaaaaaaaaaaggcatatatattatgatgcgagtgacttggt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0516300, RefSeq:Os12g0516300