BGIOSGA005657

From RiceWiki
Revision as of 02:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005657| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005657, complete gene.| tag = OsI_088...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005657

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005657, complete gene.

LocusTag

OsI_08871

Ensembl Transcript ID

BGIOSGA005657-TA

Ensembl Protein ID

BGIOSGA005657-PA

Length

2721

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32885197..32887917

Sequence Coding Region

32887883..32887917,32885197..32886616

Genome Context

<gbrowseImage1> name=IndicaChromosome02:32885197..32887917 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:32885197..32887917 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTGGGACAATATCACCGGCGGCTCATTCAACTTGGATGAAGGCATCATCGAGGCACTGTTTGGCACCGCCGCAGTAAACCGCAAGACAAAGCCTGCAGACTCCAAGGATGCCTCTGGTGGCAGCACCTCAGCTGGCCTCGGACGCTCGAACTCGCCAGAGCAAATATTCTTGCTTGAGCCACGCAAGTCGCACAACATTTCCATCATCCTCCGGTCCCTCACCGTGGGGCGAGAGGAAATCATTGACGCCCTCCTAAACGGCCATACCGAGCTCAGCACGGAGGTCCTTGAGAAGCTGTCTCGGCTCAACATCTCCAAGGAAGAGGAGAACACACTTCTGAAGTTCTCTGGGAACCCTGACAGGCTTGCTCCAGCGGAGTTCTTCCTACTCCGGCTCCTCCTTGATGTGCCCAGCCCATTTGCACGCGTCAATGCACTGCTTTTCAAGGCAAACTATGCTGCTGAGGTTGCACAGCTCAAGCAGTCACTCCGGACTCTTGAGATGGCAAGCCAGGAGCTGAGGACAAAGGGGCTGTTCTTCAAACTGCTCGAGGCTGTGCTCAAGGCAGGCAATCGGATGAATGCTGGGACAGCACGCGGTAATGCACAGGCCTTCAACCTTACTGCACTCCGCAAGCTTTCTGATGTGAAGAGCACAGACGGGAGCACCACCTTGCTCCACTTTGTCATTGAGGAGGTTGTGCGTTCAGAGGGGAAGCGTCTAGCCATCAACCGCAACTACAGTCTTCGACGCTCTGGCAGCCTTGCCAAGAGCACCGATGGTGGCAACCCAGCAGCAAGCTCCACAAGTCAGGGTCCATCACGGGAGGAGAGGCAAAATGAATACCTGAACCTCGGGCTACCGATTGTTGGAGGTCTCAGCACTGAGTTTGCCAATGTGAAGAAGGCGGCACTGGTGGACTATGACACTGTTGTCAACGAGTGCGCAATTCTGGGCAACCGGCTGGCAGGTACCAAGAAGCTCTTGGAGACCTATGGGGACGATGGATTCGCAAGAGGGTTGCGAGGATTTGTGAAGGCTGCAGAACAAGAACTGAATGAACTAAAAGGAAACCAGGAGAAAGTGCTTGAACTGGTGCAGCGGACAACTGAGTACTACCATACTGGTGCCACCAAGGACAAGAATGCACATCCCCTCCAGCTGTTCATCATAGTTAGGGACTTCCTGGGGATGGTTGATCAGGCATGTGTAGACATCAAGAGGAAATTGCAGCAGCAAAAGAAGCCAACACCACCACCGTCATCATCACAACCGGCGGCCCCAGCGGCCACAACCAAGGGGGCAGCTGATGACGCACCAGCACCGGCTCAGAAACCACCGGAAGAGGTAGATAGCAAAAGGAAGAGGGTCATGCCAAGATTCCCCAACTTGCCGGCACATTTTATGAAGGACAATGCAGACTCTGATTCAAGTAGTGACGAGGAATAG</cdnaseq>

Protein Sequence

<aaseq>MVWDNITGGSFNLDEGIIEALFGTAAVNRKTKPADSKDASGGSTSAGLGRSNSPEQIFLLEPRKSHNISIILRSLTVGREEIIDALLNGHTELSTEVLEKLSRLNISKEEENTLLKFSGNPDRLAPAEFFLLRLLLDVPSPFARVNALLFKANYAAEVAQLKQSLRTLEMASQELRTKGLFFKLLEAVLKAGNRMNAGTARGNAQAFNLTALRKLSDVKSTDGSTTLLHFVIEEVVRSEGKRLAINRNYSLRRSGSLAKSTDGGNPAASSTSQGPSREERQNEYLNLGLPIVGGLSTEFANVKKAALVDYDTVVNECAILGNRLAGTKKLLETYGDDGFARGLRGFVKAAEQELNELKGNQEKVLELVQRTTEYYHTGATKDKNAHPLQLFIIVRDFLGMVDQACVDIKRKLQQQKKPTPPPSSSQPAAPAATTKGAADDAPAPAQKPPEEVDSKRKRVMPRFPNLPAHFMKDNADSDSSSDEE</aaseq>

Gene Sequence

<dnaseqindica>1..35#1302..2721#ATGGTGTGGGACAATATCACCGGCGGCTCATTCAAGTAAGCTCCTCTTCTCATTTTCATTTCTGTGTACTTTTTAGTACTCCTGAACTGAAAGAATACGGTAGTATAGTACTATCGCCGTAGGTACAGATGTTAATTATCTTTAGGTGCTTCTTGTGCATACTGCTAGTGTGAATGTTTATTACTCCTAGTTGGTAGGAGCAGAGTACTCTACTATTCAGCTGAACATACAGAGTACAAAGTTGCACTTCAGATAGGAATGTCATACAGATCAACCAAGGAATAAACCTAGGATATTTCACTTGCATTTTTAGTTGTCACTGTGCAGAATGGCGCAGTTGGCATGAAAAGGTATGATCTCAGATCGTGCAAAGCAGGTGCACATTCTTAGATGGGATCACAGACTAGTATAGCGTAGTTTCATGTCGCCTTTTCGGTGGAATCACGTCGCAGCATCATCGGAAGGGCGCCCAAATCCTGCTGCCTTTTCTGTGCGCGTATGCTCTTTCTGGAGGCGCTTTACATTTTCTGTTGATTTTCTGTTGATTAAGGGCGCTTTACATACAAAGCCACGAGCCCGCGACAGGGACGGATGGCTGCTTTTGGTTTTATCTGATGGGCGTGACTTCTTTTGGCTTACATGGGCAAGGGGAATGGGTACACGGGATTTCGTGGAACAAGTATACGAGTTGGCGTAGCAGTGTAGCATGCTTTCTCATTGAACAGGAAAAGGAACATTTCTAAGCTTGACATACTCAAATATAGTTGTTTGGTACTACAAGATTAGCTTTTTAAATCATAGTACTCCTTTCTTTTGAACTACTATGTCTTCTTAGGTAAAATTGCTCTAGTAGACACTTTCTAGTCGAAATCATGGTGCATGCTGGGAAATTATGGTTTAGTCATTCCATGAGGTGAACAAGGTCAGTCTATAATAAATCTTGATGGGGACGGGAATTCACTTTGGCCTCATTAGAAAACAATGATAGGAATTCAGTAAAAGGATGTGAACGCAGGACACATTCAACTTAGGCAAGACAGGCACCCTTTGTCTTTGTCCGCTTGCGCCACTGGACAATCACCTGCCAATTGCCATGAGAGTCCCTCCGAAAGATAAGGGATTCATAGCCAAATGAATATAGGCATGGCCCATATTGATAATGGATACTACAGTATGTAAATTTACTTTTTTTTATATGGCTTGAATGTGATGCTATTGTTTGAAAAAACTGATTACCGGTGTTTCTCAATCTTTTTACTCATCTGAACAATTCTAACTAAGTTATTTTGTTCTGTTTCTAGCTTGGATGAAGGCATCATCGAGGCACTGTTTGGCACCGCCGCAGTAAACCGCAAGACAAAGCCTGCAGACTCCAAGGATGCCTCTGGTGGCAGCACCTCAGCTGGCCTCGGACGCTCGAACTCGCCAGAGCAAATATTCTTGCTTGAGCCACGCAAGTCGCACAACATTTCCATCATCCTCCGGTCCCTCACCGTGGGGCGAGAGGAAATCATTGACGCCCTCCTAAACGGCCATACCGAGCTCAGCACGGAGGTCCTTGAGAAGCTGTCTCGGCTCAACATCTCCAAGGAAGAGGAGAACACACTTCTGAAGTTCTCTGGGAACCCTGACAGGCTTGCTCCAGCGGAGTTCTTCCTACTCCGGCTCCTCCTTGATGTGCCCAGCCCATTTGCACGCGTCAATGCACTGCTTTTCAAGGCAAACTATGCTGCTGAGGTTGCACAGCTCAAGCAGTCACTCCGGACTCTTGAGATGGCAAGCCAGGAGCTGAGGACAAAGGGGCTGTTCTTCAAACTGCTCGAGGCTGTGCTCAAGGCAGGCAATCGGATGAATGCTGGGACAGCACGCGGTAATGCACAGGCCTTCAACCTTACTGCACTCCGCAAGCTTTCTGATGTGAAGAGCACAGACGGGAGCACCACCTTGCTCCACTTTGTCATTGAGGAGGTTGTGCGTTCAGAGGGGAAGCGTCTAGCCATCAACCGCAACTACAGTCTTCGACGCTCTGGCAGCCTTGCCAAGAGCACCGATGGTGGCAACCCAGCAGCAAGCTCCACAAGTCAGGGTCCATCACGGGAGGAGAGGCAAAATGAATACCTGAACCTCGGGCTACCGATTGTTGGAGGTCTCAGCACTGAGTTTGCCAATGTGAAGAAGGCGGCACTGGTGGACTATGACACTGTTGTCAACGAGTGCGCAATTCTGGGCAACCGGCTGGCAGGTACCAAGAAGCTCTTGGAGACCTATGGGGACGATGGATTCGCAAGAGGGTTGCGAGGATTTGTGAAGGCTGCAGAACAAGAACTGAATGAACTAAAAGGAAACCAGGAGAAAGTGCTTGAACTGGTGCAGCGGACAACTGAGTACTACCATACTGGTGCCACCAAGGACAAGAATGCACATCCCCTCCAGCTGTTCATCATAGTTAGGGACTTCCTGGGGATGGTTGATCAGGCATGTGTAGACATCAAGAGGAAATTGCAGCAGCAAAAGAAGCCAACACCACCACCGTCATCATCACAACCGGCGGCCCCAGCGGCCACAACCAAGGGGGCAGCTGATGACGCACCAGCACCGGCTCAGAAACCACCGGAAGAGGTAGATAGCAAAAGGAAGAGGGTCATGCCAAGATTCCCCAACTTGCCGGCACATTTTATGAAGGACAATGCAGACTCTGATTCAAGTAGTGACGAGGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005657