BGIOSGA005662

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Revision as of 02:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005662| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005662, complete gene.| tag = P0487D0...")
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Gene Name

BGIOSGA005662

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005662, complete gene.

LocusTag

P0487D09.23

Ensembl Transcript ID

BGIOSGA005662-TA

Ensembl Protein ID

BGIOSGA005662-PA

Length

5308

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32731589..32736896

Sequence Coding Region

32736818..32736896,32736178..32736291,32735926..32736043,32735727..32735803,32735575..32735651
,32735388..32735465,32735215..32735286,32735028..32735101,32734724..32734856
,32734572..32734643,32734149..32734268,32733766..32733837,32733192..32733332
,32732915..32732999,32732398..32732836,32731589..32731853

Genome Context

<gbrowseImage1> name=IndicaChromosome02:32731589..32736896 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:32731589..32736896 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGGCGGCTCCACGGCGCCCCTCCTCGCGGCCTTCGCTTGCGTCTTCCTCGCCGTCTTCCCTCCCGTCGCCTCCGGAGATGCTGCAACGTTGGAGTCGGTTCCGGATCTTGTGAAGGCAATGTACATAAACGTTGAAAGCTTCCCTTGTGTGAGGCTGTTGAATCACTCTGGTCAAGTCGGTTGTTCTAATCCTGGGCATGACAAGGTTATTGCACCGATTGTAAGATTTGGAAACAGAAATGATCAGTTGGTTCAGCCGTCGGCGGTTCTTCTTCCCTTAAATCAGATGACAGATTTCTTTCTGAGGGTATCCAATGATCCAGAACTTTATCGTAAGATAGCTGGCGTACTAGTTGAGGCAAATGGCGTTGATAACATGCTAGAGTTTTCACCGGATAGAAAATTTCCACAACAGGCTTTTGCACCATACTCAAATCTCAGCCATCATTGGAATCCCACGGGATCAGGTATTATGTGGAACAAATATGACTTTCCTGTGTTTCTTCTCTCAGAGGAGAGCACACAGACTCTGCAAAACCTTGCGGACAAGAATGAGAAGAGTGCCAATGGATATCTAGCAAATGTTGCAGAATTTGACCTCGTTATGCAGACAACAAAAGCTGGGACGCATGATTCAGAGTCCTGCCTCAGAGAGCAGTCATGCTTGCCTTTAGGAGGACAGAGTGTATGGACTTCGTTACCACCAATCAGCAATTCATCTACAAAGCATCAGAAACCAATAATAATGGTCACTGCATCCCAAGACTCTGCATCATTCTTTCGGGACCGTAGTCTTGGTGCTGATTCTCCCATCTCTGGATTGATTGCCTTGCTCACTGCTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGCTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGGAAATTCTTACAGGAATTAGATCAAGGGGCTGACTCTGTTAATGGCATTAGCAGCTTATTGATTGACCAGGTCTTGGAGATTGGTTCCGTTGGCAAGGCCATAAGTCAGGGATATCCACTATTTTATGCGCATGCTGCAGGGAATTCGTCAATTTCGATGAAAATGGTAGATGCACTCCAAAGTGCCAGTGAATCACTTGGTTCTGATAATGTTAAAGTAAAACCAGCAGCTTCATCAAATCCTGGTGTTCCACCATCTTCATTAATGTCGTTCCTAGGAAAGAATTCATCAACTCCTGGACTTGTCTTGGAGGATTTTGATTCCCAATTTTCTAATAGATTTTACCACAGCACTTTGGATGGCCCTGCAAACGTCAATTCTTCGTCAATAGCAGCTGCTGCTGCTTTGATTGCCAGATCATTATACATTCTTGCTAGCGCAGACTTGCCCATTGATCTCATCACACTGAACACTATTAAAGTGAATGTTTCACTGGTAGAAGAATTGATTGGATGTCTACTGAAATGTGATCCTGGTCTTTCTTGCGGAATTGTGAAGAGCTTCATTTCTCCAAGCAACTCATGTCCAAGTCACTATGTTGGTGTTTTTCAGGATTTGCCTGCTGGCACACAGTTTCCTTCATATGCAGATGATATCTCTCGGTTTATATGGAACTTTTTGGCAGACAGAACTTCTAGTTTGGCAGGTAACAGTAGCTCTTGTACTGGACAGTGCCATGATGAAGGCGAAATATGTGTAGGGGCAGAAGTGGAAGGTGGAGGCAGATGTGTTGTATCTACAACTAGATATGTCCCTGCCTATTCAACGCGGCTGAAGTTTGAGGACAATGTATGGCATGTTCTTCCAGTAAACTCTTCAGACCCTTTTAGTGCTGCAGATCCTGTGTGGACCGAAAGCTTCTGGAATACAATTGGCCTCAGGGTGTATGCAGTGCAAGCTACATCTTATGATTGGCTTGTTCTTCTGATCGGGATCATTATTACGGTGGCATCATACTTTGCAGTGATCGTTGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTGA</cdnaseq>

Protein Sequence

<aaseq>MGGGSTAPLLAAFACVFLAVFPPVASGDAATLESVPDLVKAMYINVESFPCVRLLNHSGQVGCSNPGHDKVIAPIVRFGNRNDQLVQPSAVLLPLNQMTDFFLRVSNDPELYRKIAGVLVEANGVDNMLEFSPDRKFPQQAFAPYSNLSHHWNPTGSGIMWNKYDFPVFLLSEESTQTLQNLADKNEKSANGYLANVAEFDLVMQTTKAGTHDSESCLREQSCLPLGGQSVWTSLPPISNSSTKHQKPIIMVTASQDSASFFRDRSLGADSPISGLIALLTAVDALSHLHDISNLKKQLVFAVFNGEAWGYLGSRKFLQELDQGADSVNGISSLLIDQVLEIGSVGKAISQGYPLFYAHAAGNSSISMKMVDALQSASESLGSDNVKVKPAASSNPGVPPSSLMSFLGKNSSTPGLVLEDFDSQFSNRFYHSTLDGPANVNSSSIAAAAALIARSLYILASADLPIDLITLNTIKVNVSLVEELIGCLLKCDPGLSCGIVKSFISPSNSCPSHYVGVFQDLPAGTQFPSYADDISRFIWNFLADRTSSLAGNSSSCTGQCHDEGEICVGAEVEGGGRCVVSTTRYVPAYSTRLKFEDNVWHVLPVNSSDPFSAADPVWTESFWNTIGLRVYAVQATSYDWLVLLIGIIITVASYFAVIVGRSYISKIIKRD</aaseq>

Gene Sequence

<dnaseqindica>1..79#606..719#854..971#1094..1170#1246..1322#1432..1509#1611..1682#1796..1869#2041..2173#2254..2325#2629..2748#3060..3131#3565..3705#3898..3982#4061..4499#5044..5308#ATGGGGGGCGGCTCCACGGCGCCCCTCCTCGCGGCCTTCGCTTGCGTCTTCCTCGCCGTCTTCCCTCCCGTCGCCTCCGGTGAGTTGGTCCTCTACTGACCATCGCGGAGTCTATATCGCTTTGTTTGCTCTGGACTCTGGGGTGTAACAAATTCTACCGAATCGAGATGGTCTCATGCTTCGTTGGGTATCTTCTGTTATGTGATGTGTTTCTAGGGTGAAATTGTGTAGGGGGTAGGTCTCAGCGTAGCCTTGAGGTGAATTAGGTAGTGGACTGCTAAACCTAGTTAGTTCTGAAGCTTGGGCGAACACCTCCGTTGTTGTGCTGATAGGCCTCTAGTTGTGCTCATGGAGCTTTGACATGCGACTATAATTTTTTTTCTAGTATCTCATTCTAGGAAGTTTTGTGATTGCTAAAGTATTGTGATGTCTTAGGTGTAGGTTTGTTTAGGTTCATTTGAATTATAAAATCGTGATACTGCTTACTGTCTTAATATATTTATATATGGGACACAGGTTTGCAAAGCAACGTAAGATATCCCAACTTATGACTGCTGTAACATTGATGTACCATAACTTAAGGATCCTCTTACCTTTCTTTTTAGGAGATGCTGCAACGTTGGAGTCGGTTCCGGATCTTGTGAAGGCAATGTACATAAACGTTGAAAGCTTCCCTTGTGTGAGGCTGTTGAATCACTCTGGTCAAGTCGGTTGTTCTAGTGAGTATTCGGTTTACTCTTATTCTGTATGCTTAAATTAAGATGGCTGTCATTTTCTATCATCATTGTCAAAGGCTAGCCAACTCTGCCTTGTTAAGAGTACATGGTTATTGGGGTCTCTATTATGTAATCAGATCCTGGGCATGACAAGGTTATTGCACCGATTGTAAGATTTGGAAACAGAAATGATCAGTTGGTTCAGCCGTCGGCGGTTCTTCTTCCCTTAAATCAGATGACAGATTTCTTTCTGAGGTATAATTGCTTAGATAGTCTAAATCTCACAAATGATATTACATATGATCGTCTTTCAAAGTTATGTTTCCTTGAGGTGCTAAGAGATGAGAATATTTGCTACATTGTTTGCTCTTGTGCAGGGTATCCAATGATCCAGAACTTTATCGTAAGATAGCTGGCGTACTAGTTGAGGCAAATGGCGTTGATAACATGCTAGGTTTGTGGATTTGTTTTTTTTATGTATTTTATTGCCTTTTAATTCCAAAAATAATGTACTGTTCTGACTTTGTAGAGTTTTCACCGGATAGAAAATTTCCACAACAGGCTTTTGCACCATACTCAAATCTCAGCCATCATTGGAATCCCACGGTAAGTTATGCGGTTGATTAAAATGGTACCACCCTGTTGAGAGACAAACGTGATCAGCTGATCACATGCATTGAATATCACTCTGTTACCCTGACATTTACTTTTGTAGGGATCAGGTATTATGTGGAACAAATATGACTTTCCTGTGTTTCTTCTCTCAGAGGAGAGCACACAGACTCTGCAAAACGTAATCTGCCTGCTCTTATATATTTATTATAGTTCTCATTTCTTCTTTACAAACTCCAGCTACACAATGCAATGACTCTAAAAAGAGATTATCAATAACAGCTTGCGGACAAGAATGAGAAGAGTGCCAATGGATATCTAGCAAATGTTGCAGAATTTGACCTCGTTATGCAGGTTTTGATTTTTCACATGAAATGTTCTCCCTATGTTTCTTGCACATCTTTATCTGTATGTTTTGATCGCATGGATAATGGATTATGTTTCTCCTAATTGACATGAACTTTTAGACAACAAAAGCTGGGACGCATGATTCAGAGTCCTGCCTCAGAGAGCAGTCATGCTTGCCTTTAGGAGGACAGAGGTGACCACTTTTTTTTTCTTGCATAGGCATTTGCACCTCTGTTTTGGAAAGTTATGGATATATTTAAGTTCCACAATGTGTTGTGGTAGTTGCTACCTTGCCAACTGAGTATTATCGTCTTCTGTTAGCTAGTTTTTGTTTCAACTTTTGGTTCTCATGTTTGAAGGGCAGTGTATGGACTTCGTTACCACCAATCAGCAATTCATCTACAAAGCATCAGAAACCAATAATAATGGTCACTGCATCCCAAGACTCTGCATCATTCTTTCGGGACCGTAGTCTTGGTGCTGATTCTCCCATCTCTGTAAGTTCCTACTAATTTGTGGGTATGATAACTGCATCTTACATTATAGTTCTATGAAATAACTATGGAGTTATGCACAGGGATTGATTGCCTTGCTCACTGCTGTTGATGCTCTCTCTCACCTTCATGATATAAGTAATCTTAAGAAACAGGTAAGATTATTACTACTAGAAATTATTCTGTAAGTTGTGTGCATGTTATTGCATTGGGTTCTTTTGCATCTGTCATCTGCTAGAGCAGTGTTGCAGGTCTACTCTAGCTACTTTGTGTTTCTTTTGTGAATTATGATACTCATTTTGAACTTGCAGCCCTTGACATCTCAATCATTGTCCTTTATCTAAGCATGGCGTGGTAGATTTAATATGGCTATTCATATCTGGTTTAGTATGGATTTGTGGTGATTGATTCCTAAATTGTTGTGTTCTTATTCTCACATCATACCGCATGATATGCAGCTTGTTTTTGCTGTTTTCAATGGTGAAGCCTGGGGTTATCTTGGTAGCCGGAAATTCTTACAGGAATTAGATCAAGGGGCTGACTCTGTTAATGGCATTAGCAGCTTATTGATTGACCAGGTGAGTGCTTGATAGGATAACGCTTGCAATTGCAGCACCAAATCATTTGCAAATGCTTTCAAACATATAGTTTTCCTTGGATGTCCCTTGCTTCAGGGTATTGTCCTTCTGCAGTTTTTTAGGTTGTGGACTTAATGAATTTAAACCTGTGAAATTTACCATATAGTCCTGAGTCTTCAGGCGATACATATTTCGGTCTCTACACAGTTCCATAACCTAATTATATGATTATTTAGGCAAGTATCTGTCTCTACATTGTTCCATAACTTAATTATATGATTATTTAAGCAAGTGCTTTTGACACGATTCAGGTCTTGGAGATTGGTTCCGTTGGCAAGGCCATAAGTCAGGGATATCCACTATTTTATGCGCATGCTGCAGGGGTAAGCCTTTTTTGTGGTTATTTCCCCTGCCTGTTCTTGGTGAATGTAATTGCTTATTCAAAATGTTTTTTTTTTTCAGTTCCTGTTAGTGTCATAGTGGTTGGTACCCCACTCTGTACAGGCTATTTTAGTTATTGGAGATGGATAAACAGAAAGAATTTAGGCACAGTAGATGGTGGCCTGTGGACATCCATATGTATAGTTTAGGTTTCAGTGTTGCATCAGAATATTCCTTTTTGTCGAATATCTCAGTGAACTATTTTTTATCATGACTTTATATGAAGATATTTTATTCTGGAGAGATTTATCAAAATATTTGTTCTCAAATTCTTGAGTAAAGCACACTGGGTGTCCAAAAAATAGCTGTACATTGGAATTTAAAACACCATAGGCATTGTTCCATATTGTTCATATTTATCTTCTGCTTTGACAGAATTCGTCAATTTCGATGAAAATGGTAGATGCACTCCAAAGTGCCAGTGAATCACTTGGTTCTGATAATGTTAAAGTAAAACCAGCAGCTTCATCAAATCCTGGTGTTCCACCATCTTCATTAATGTCGTTCCTAGGAAAGGTAAAACCTCAAATATCCATAAACATAACCATTTGCTTGATAGTATTGCACTCAATATGCAACACATTAATTTAGTGATGTTCCATCTTTTTTTTTCTTTTTGCATTAGAAACATTGATTTTTCCAAACAAATATTTCTCTTTGAAATCTGAGTGCCATGACCTGTTCACTGTTAACCCATCAATAATGCAGAATTCATCAACTCCTGGACTTGTCTTGGAGGATTTTGATTCCCAATTTTCTAATAGATTTTACCACAGCACTTTGGATGGCCCTGGTAAGTTCACCATGCAGAGATCTGATGATTTCTTTTGTAGAAACCCAGGATTAAACCTGTAATGTCTTTTTTTTACAGCAAACGTCAATTCTTCGTCAATAGCAGCTGCTGCTGCTTTGATTGCCAGATCATTATACATTCTTGCTAGCGCAGACTTGCCCATTGATCTCATCACACTGAACACTATTAAAGTGAATGTTTCACTGGTAGAAGAATTGATTGGATGTCTACTGAAATGTGATCCTGGTCTTTCTTGCGGAATTGTGAAGAGCTTCATTTCTCCAAGCAACTCATGTCCAAGTCACTATGTTGGTGTTTTTCAGGATTTGCCTGCTGGCACACAGTTTCCTTCATATGCAGATGATATCTCTCGGTTTATATGGAACTTTTTGGCAGACAGAACTTCTAGTTTGGCAGGTAACAGTAGCTCTTGTACTGGACAGTGCCATGATGAAGGCGAAATATGTGTAGGGGCAGAAGTGGAAGGTGGAGGCAGATGTGTTGTATCTACAACTAGGTATCTTCTTTTCTTGAGACACATACTCCCTTCTAGAACTAGGTAACATTTTTCTATGGGCCCTTTTAGAACGTTGAAATCAAATCCCTACTGTGCGTTACTTATTTGGGTGACAGGCATTAGCGGTTTAATTATGAACTAGGCAATTATAAGTGTATGCTTAGGGATGCAAGTGGGCAATCCCTCTACTCATATAAAAACCCGCTTAATAGTTCATTTTCTTGCTTCTAGTACAAAATTTGGAAGAAAAAATTAACTAGAATTGTGATAAGGGCACACTTGCATCCCTATGTATGCTGGAGCATCCATAATCCAGTTAGTTTTTGTATATAGAAAGAAATAAAATTTGCTGACACTAAAGTAATTTTGACTCGCACTCTTTTTTGTGTTGATTAACTAAACTAACATGTACTGGTGTTGATTAACTAACATGTACTGAATTTTGTTATCATGCTTGTATTTTTGTGGTGATTGGTTGCTGTTGTACTCTCTATTTCTACTTGGAGATTTACTGATTGCTTTATTAACTTTCTTGACAACTTAGATATGTCCCTGCCTATTCAACGCGGCTGAAGTTTGAGGACAATGTATGGCATGTTCTTCCAGTAAACTCTTCAGACCCTTTTAGTGCTGCAGATCCTGTGTGGACCGAAAGCTTCTGGAATACAATTGGCCTCAGGGTGTATGCAGTGCAAGCTACATCTTATGATTGGCTTGTTCTTCTGATCGGGATCATTATTACGGTGGCATCATACTTTGCAGTGATCGTTGGCAGATCATACATTTCAAAGATCATAAAGCGGGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005662