BGIOSGA005685

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Revision as of 02:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005685| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005685, complete gene.| tag = ALDH2A|...")
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Gene Name

BGIOSGA005685

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005685, complete gene.

LocusTag

ALDH2A

Ensembl Transcript ID

BGIOSGA005685-TA

Ensembl Protein ID

BGIOSGA005685-PA

Length

3038

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32336019..32339056

Sequence Coding Region

32338957..32339056,32338016..32338174,32337789..32337931,32337225..32337698,32336980..32337153
,32336743..32336880,32336523..32336660,32336383..32336444,32336019..32336292

Genome Context

<gbrowseImage1> name=IndicaChromosome02:32336019..32339056 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:32336019..32339056 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCAAGGAGGGCTGCTTCCTCCCTCCTCTCTCGCGGCCTCATCGCGAGGCCTTCTGCTGCCTCCTCCACTGGCGACTCCGCTATCCTTGGAGCAGGCTCAGCACGGGGCTTCTTGCCTGGAGCACTTCACAGATTCAGCGCTGCACCGGCCGCCGCTGCCACCGCCGCAGCCACTGAGGAGCCGATCCAGCCGCCGGTGGACGTGAAGTACACCAAGCTCCTCATCAATGGCAACTTCGTCGATGCAGCATCTGGGAAGACGTTCGCGACGGTGGATCCCCGCACCGGCGATGTCATTGCCCGCGTGGCCGAGGGCGACGCGGAGGACGTCAACCGCGCCGTCGCCGCCGCCCGCCGGGCCTTCGACGAGGGCCCGTGGCCGCGGATGACCGCCTACGAGCGGTGCAGGGTGTTGTTGCGGTTCGCGGACCTGATCGAGCAGCACGCCGATGAGATCGCGGCGCTGGAGACGTGGGACGGCGGGAAGACGCTGGAGCAGACGACGGGGACGGAGGTGCCGATGGTGGCGCGGTACATGCGGTACTACGGCGGGTGGGCGGACAAGATCCACGGCCTCGTCGTGCCGGCGGATGGGCCACACCACGTGCAGGTGCTACACGAGCCCATCGGCGTGGCCGGGCAGATCATCCCCTGGAACTTCCCGCTGCTCATGTTCGCCTGGAAGGTCGGCCCGGCGCTCGCCTGCGGCAACGCCGTCGTGCTCAAGACCGCCGAGCAGACGCCGCTCTCCGCGCTCTTCGTCGCCAGCCTGCTCCACGAGGCTGGCCTCCCCGACGGCGTTCTCAACGTCGTCTCCGGCTTTGGTCCGACCGCCGGCGCCGCTCTCTCCAGCCACATGGGTGTCGACAAGCTTGCATTCACCGGTTCGACGGGCACGGGCAAGATCGTGCTTGAGCTGGCCGCAAGGAGCAACCTTAAGCCGGTGACGCTGGAGCTCGGAGGCAAATCACCTTTCATCGTCATGGATGACGCCGATGTCGACCAGGCCGTCGAGCTTGCGCACCGCGCGCTCTTCTTCAACCAGGGGCAATGCTGCTGCGCGGGGTCACGCACGTTCGTGCACGAGCGCGTCTACGACGAGTTCGTGGAGAAGGCCAGGGCTCGCGCTCTGCAGCGTGTGGTCGGCGACCCATTCAGGACAGGCGTCGAGCAGGGGCCTCAGATCGACGGCGAGCAATTCAAGAAGATCTTGCAGTACGTCAAGTCGGGCGTGGACAGTGGCGCCACACTCGTGGCCGGCGGCGACAGGGCGGGCAGCAGGGGGTTCTACATCCAGCCAACCGTCTTTGCAGACGTCGAGGACGAAATGAAGATCGCGCAGGAGGAGATATTCGGGCCGGTGCAGTCCATCCTCAAGTTCAGCACGGTGGAGGAGGTGGTGCGGAGGGCGAACGCGACGCCATACGGGCTGGCGGCGGGGGTGTTCACCCAGAGGCTGGACGCGGCGAACACCCTGGCGCGGGCATTGAGGGTCGGGACGGTGTGGGTGAACACCTACGACGTGTTCGACGCGGCCGTCCCGTTCGGCGGCTACAAGATGAGCGGCGTTGGCAGGGAGAAGGGCGTCTACAGCCTCCGCAACTACCTCCAGACCAAGGCCGTCGTCACGCCCATCAAGGACGCCGCCTGGTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAARRAASSLLSRGLIARPSAASSTGDSAILGAGSARGFLPGALHRFSAAPAAAATAAATEEPIQPPVDVKYTKLLINGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDEGPWPRMTAYERCRVLLRFADLIEQHADEIAALETWDGGKTLEQTTGTEVPMVARYMRYYGGWADKIHGLVVPADGPHHVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNAVVLKTAEQTPLSALFVASLLHEAGLPDGVLNVVSGFGPTAGAALSSHMGVDKLAFTGSTGTGKIVLELAARSNLKPVTLELGGKSPFIVMDDADVDQAVELAHRALFFNQGQCCCAGSRTFVHERVYDEFVEKARARALQRVVGDPFRTGVEQGPQIDGEQFKKILQYVKSGVDSGATLVAGGDRAGSRGFYIQPTVFADVEDEMKIAQEEIFGPVQSILKFSTVEEVVRRANATPYGLAAGVFTQRLDAANTLARALRVGTVWVNTYDVFDAAVPFGGYKMSGVGREKGVYSLRNYLQTKAVVTPIKDAAWL</aaseq>

Gene Sequence

<dnaseqindica>1..100#883..1041#1126..1268#1359..1832#1904..2077#2177..2314#2397..2534#2613..2674#2765..3038#ATGGCGGCAAGGAGGGCTGCTTCCTCCCTCCTCTCTCGCGGCCTCATCGCGAGGCCTTCTGCTGCCTCCTCCACTGGCGACTCCGCTATCCTTGGAGCAGGTGATGATCTCTGCTTGGATCTTTTCTTGTGTTCTCGAGTTGGTGAGAAATGGTTTACATTTTCTGTCGCTTGAATTGAGCGATGAGTGTTTAGGGGATTTACTGTAAGTTCTTCTCTGTTAAATCGGTGAGAACCTTCTTTCTTTCATTTTCTGATGAAAATGACCGGCGGTTCGGCACAATGAGAGCGTCTCTGATGGAGTGAGATTAGCTTATGTCTTCAAATGTTTCTTCCTAGAACTTTGTCCTTTTCTGTTCTGTTTGTTCGGTTTCTAGTAAGTAGCGTCATGAGTGAGTCATGCCACTAAAGTTAGTTAGACCTCTCCTCCCCAAGTGGCCGTGGAGATGAGGTTCTGTTTTTCTCGTGTATGATATTTTGACGCTTTCAATTGGATCCTTATCAAAACTCGGATAAACCAAAAGCAGTTCAGTCTTTTCCCCCCTTTTTTCTTGCCACTGCTCATCATGTCCACCTTCAGTGTCATCCTGTCACGACTCACGAGTTCGATGCTCTCCTGGGAGGGAGATCACACCCCCGTCATGCACCAACAAACAAATACTTAATTCATGAATCTATTCCTTGTTCCGATTGAGATGTACTTACGAAAAATAATAAGAAAATAGAACTTTTATGTTACAATATTATCTCCTTAAACAAAATTGTTACTGTAGTTTGCTAGTCCGTTTGATGGAGCATTTGAGAGCAATCATACCACACATGCAACTGGTGATACACACATTTCACTGGACGTACTTACCTACCCTCTGCGTTGCGGTTACAGGCTCAGCACGGGGCTTCTTGCCTGGAGCACTTCACAGATTCAGCGCTGCACCGGCCGCCGCTGCCACCGCCGCAGCCACTGAGGAGCCGATCCAGCCGCCGGTGGACGTGAAGTACACCAAGCTCCTCATCAATGGCAACTTCGTCGATGCAGCATCTGGTACACGAGCTACTCGACCCAGCACGCCTCCGCGGCGAGTCCACATTCACGATCGATAGGCGTAACGCATGTTTTCTCCTTCAGGGAAGACGTTCGCGACGGTGGATCCCCGCACCGGCGATGTCATTGCCCGCGTGGCCGAGGGCGACGCGGAGGACGTCAACCGCGCCGTCGCCGCCGCCCGCCGGGCCTTCGACGAGGGCCCGTGGCCGCGGATGACCGCCTACGTAAGTTGCAACTGTGTCGCCACGAGCTGCCGTGCGGCGGCGTGCGTGCGTGCACCGCCATGATAGGAGTTTGCGCGTGTGTGCATGCAGGAGCGGTGCAGGGTGTTGTTGCGGTTCGCGGACCTGATCGAGCAGCACGCCGATGAGATCGCGGCGCTGGAGACGTGGGACGGCGGGAAGACGCTGGAGCAGACGACGGGGACGGAGGTGCCGATGGTGGCGCGGTACATGCGGTACTACGGCGGGTGGGCGGACAAGATCCACGGCCTCGTCGTGCCGGCGGATGGGCCACACCACGTGCAGGTGCTACACGAGCCCATCGGCGTGGCCGGGCAGATCATCCCCTGGAACTTCCCGCTGCTCATGTTCGCCTGGAAGGTCGGCCCGGCGCTCGCCTGCGGCAACGCCGTCGTGCTCAAGACCGCCGAGCAGACGCCGCTCTCCGCGCTCTTCGTCGCCAGCCTGCTCCACGAGGCTGGCCTCCCCGACGGCGTTCTCAACGTCGTCTCCGGCTTTGGTCCGACCGCCGGCGCCGCTCTCTCCAGCCACATGGGTGTCGACAAGGTAACCATCGGATTAACCTCACGGGTGCTTTTCTGTAACAATTTTACTGAGGATTTTGGCCGTGTGCGTAGCTTGCATTCACCGGTTCGACGGGCACGGGCAAGATCGTGCTTGAGCTGGCCGCAAGGAGCAACCTTAAGCCGGTGACGCTGGAGCTCGGAGGCAAATCACCTTTCATCGTCATGGATGACGCCGATGTCGACCAGGCCGTCGAGCTTGCGCACCGCGCGCTCTTCTTCAACCAGGTATGTGTCGCTATTTGCACGGCGTTTTTGCGTGCCATTGCGTCTTCAGCAACGGGCTCTGAACAAAATGTCATATGTTCTGCGATGTGCGGCGAGCAGGGGCAATGCTGCTGCGCGGGGTCACGCACGTTCGTGCACGAGCGCGTCTACGACGAGTTCGTGGAGAAGGCCAGGGCTCGCGCTCTGCAGCGTGTGGTCGGCGACCCATTCAGGACAGGCGTCGAGCAGGGGCCTCAGGTACACCAACAAATCAGTTGCTCAAGATACACAGCGATAAAACCCAACCCGTAACCCAAAATTTCCTCTCTGTTTGAATCAGATCGACGGCGAGCAATTCAAGAAGATCTTGCAGTACGTCAAGTCGGGCGTGGACAGTGGCGCCACACTCGTGGCCGGCGGCGACAGGGCGGGCAGCAGGGGGTTCTACATCCAGCCAACCGTCTTTGCAGACGTCGAGGTAATGCAATCACAATTCACACACCCTTCGCCTAGTTTCCCCCAACATCTGTTCATGTCGTTTTGCCGGTTATTGCAGGACGAAATGAAGATCGCGCAGGAGGAGATATTCGGGCCGGTGCAGTCCATCCTCAAGTTCAGGTTTGCAACACTAGAATTCCCCCGAATTCCATCTGACCGTGACAGATTATCAACTGGAATTTATACAAACACCTTACGTGCAATGTGCAGCACGGTGGAGGAGGTGGTGCGGAGGGCGAACGCGACGCCATACGGGCTGGCGGCGGGGGTGTTCACCCAGAGGCTGGACGCGGCGAACACCCTGGCGCGGGCATTGAGGGTCGGGACGGTGTGGGTGAACACCTACGACGTGTTCGACGCGGCCGTCCCGTTCGGCGGCTACAAGATGAGCGGCGTTGGCAGGGAGAAGGGCGTCTACAGCCTCCGCAACTACCTCCAGACCAAGGCCGTCGTCACGCCCATCAAGGACGCCGCCTGGTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005685

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005685&oldid=59237"