BGIOSGA005687

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Revision as of 02:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005687| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005687, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA005687

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005687, complete gene.

LocusTag

OSJNBA0072H09.17

Ensembl Transcript ID

BGIOSGA005687-TA

Ensembl Protein ID

BGIOSGA005687-PA

Length

6446

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32293214..32299659

Sequence Coding Region

32299462..32299659,32299127..32299360,32298847..32299039,32298605..32298746,32298381..32298512
,32298057..32298289,32295138..32295217,32293598..32294431,32293366..32293512
,32293214..32293261

Genome Context

<gbrowseImage1> name=IndicaChromosome02:32293214..32299659 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:32293214..32299659 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCCCTTTCGGTGTCGGCCATCCTCGCGCCGTCGCCGCCGCCAGCCCAGGCGGCCGCAAGGGCCTCGCCGCGCCGCGCGCCAGCGAGCGCCGCGCCTGTCGCCGCCGCCATTTCGACGGCATTGCTTGCTTTGACTCCTGCCGCGCACGCCGCGGCGTTCTCCAAGGAGGACGTCGCCGGCTCCGTGACCAAGGTGGTGGACACGGTGGACCAGGTCATCGGCGTCGGCGGCAAGGTGGCCGAGCAGTCCGCCGGCGTGCTCAAGGCGCTGGGCGAGGCCGCGAAGCCGGCCCTGCCTGCGCTGAAGAGCGCCGGCGAGCAGGCGCTGAAGCTCGCCTCGCCGGTGGTCTCCGGCGCCTCCAAGCAAGCCACGGAGGCGCTCCAGGGCGCCGGCGTCGACCCCGCCCCCGTTCTGTCCGCCGCTAAGACCGTCGCGGACGCGGCGCAGCAGGGCACGAAGGTCATCGACGCCGCGAAGCCCATCGCGTCGGCGACGGTGGAGACCATCGGGTCGCTGGGCTCCGCGGACTACGTCGTGGTCGCCGGAGCGGCGTTCCTCGCGTACCTGCTCCTGCCGCCGGCATGGTCCCTGCTTTCTTTCACTCTCCGCGGCTACAAAGGTGACCTGACCGCTGCACAAGCTCTGGACATGGTGACCTCGCAAGATTACGTGCTGATCGATGTGAGGACCGAGAAGGACAAGGCCAAAACCGGCGTGCCACAGCTCCCCTCGAACGCGAAGAACAAGCTCATCTCTATCCCGCTGGAAGAGCTTCCAAGCAAGACGAAGAGCATGGTGCGCAACGCGAAACAAGCCGAGGCGGAGATCGCCGCGCTGAAGATCTCCTACCTCAAGAGGATCGGCAAGGGCTCCAACGTCATCATCATGGACTCGTATTGCGACAGCTCGAAGATCGTGGCGAAGACGCTCAACAGCGTCGGGTTCAAGAACTGCTGGGTCATGGCCGGCGGCTTCTCCGGCAGGAAAGGGTGGGCGCAGAGCCGGCTCGGGACGGACTCGTACAACCTGTCGGTCGTCGAAGTCGTCACGCCGTCGCGGGTAATTCCTGCGGCCGCTGATCGGCTCGTGACGGCTTCGTCGTCGGCTTCACGGACGACCACGAGTCGTGGCTCAATTACTTCAGTGGCTAAAACTGAAAGAAAGGGTCTGCACTACCAACTAAAAGAAAACGTTTACCTTCCAGAGGACATCTTGCGGCTGATCCATGCCATGATGCCACTGCGAGATGCTGCTCGTGCTGCTTGCGCCTCGCACATATTCCTGCAGTCCTGGAGATGTCGTCCCAACCTTATCTTCACTGGGGAGACGTTGGGCTTGATTATAAATGGTACTGGAAAGGATGACGCTAAAAGAGACTTCATCAATATAGTACAGCGCATACTGCTGAATCACTCAGGCATTGGCGTGAAAACACTAAAGCTTGAACTCCTCCATTTTAGCGATCTCGACTTTGGTTGTCTCGAAGCCTGGCTTCAGATTGCTGTTGCACCAGGGATTGAGGAACTCACCCTGATGTTTCCTTGCGTAAGATACAAATTCCCATGCTCGCTCTTATTTGAAAGAGGTGGAAACTCGGTTCGATATCTTCACCTCATGGTCTGCACCTTCCGTCCTACAATTGGTCTTGGTTGCTTGATAAAATTGACGCAGTTGCATCTGTCTTTCGTGTGGATTACTGGAGATGAGTTAGAGCTCCTTTCCAAATGCGTCGCTTTGGAGTGGCTGAAACTCTCATATTGCCCTGAGATAATTTGCTTGAAAGTACCTTGTATGCTAAGGCAGCTTGGCTCCCTTGAGGTGGCTGAATGCAGATATTTGAAAGTCATAGAGATCTGTGCTCCAAATCTTTCAAATTTTTATCTTACTGGTTTTCTAGTACGGACTTCATTTGAGAATCCATTGCTAGTGAAGAAACTACGAATCATGTGTTTACGTCAAGGCAACTTTGTTTCTTACTCTCGTACGAAGCTTCCATCCCTTGTGCCAAATGTTGAAACACTTACAGTAGCATCTAATGAAATTGTCAAGACACCTATGGTGCCCGGCAAATTCCTCCATCTCAAGCACTTGCATGTTTATTTTATCTCACTGGCTATTTCCTATGATTATTTATTTCTGATTTCCTTTTTTGAAGCTTCTCCTTCACTGGAGACATTCATGTTGTCTGTGACGCAGCGTCGCATTGAGAACCCTTTCATCCAGCTCAATCCCTGA</cdnaseq>

Protein Sequence

<aaseq>MAPLSVSAILAPSPPPAQAAARASPRRAPASAAPVAAAISTALLALTPAAHAAAFSKEDVAGSVTKVVDTVDQVIGVGGKVAEQSAGVLKALGEAAKPALPALKSAGEQALKLASPVVSGASKQATEALQGAGVDPAPVLSAAKTVADAAQQGTKVIDAAKPIASATVETIGSLGSADYVVVAGAAFLAYLLLPPAWSLLSFTLRGYKGDLTAAQALDMVTSQDYVLIDVRTEKDKAKTGVPQLPSNAKNKLISIPLEELPSKTKSMVRNAKQAEAEIAALKISYLKRIGKGSNVIIMDSYCDSSKIVAKTLNSVGFKNCWVMAGGFSGRKGWAQSRLGTDSYNLSVVEVVTPSRVIPAAADRLVTASSSASRTTTSRGSITSVAKTERKGLHYQLKENVYLPEDILRLIHAMMPLRDAARAACASHIFLQSWRCRPNLIFTGETLGLIINGTGKDDAKRDFINIVQRILLNHSGIGVKTLKLELLHFSDLDFGCLEAWLQIAVAPGIEELTLMFPCVRYKFPCSLLFERGGNSVRYLHLMVCTFRPTIGLGCLIKLTQLHLSFVWITGDELELLSKCVALEWLKLSYCPEIICLKVPCMLRQLGSLEVAECRYLKVIEICAPNLSNFYLTGFLVRTSFENPLLVKKLRIMCLRQGNFVSYSRTKLPSLVPNVETLTVASNEIVKTPMVPGKFLHLKHLHVYFISLAISYDYLFLISFFEASPSLETFMLSVTQRRIENPFIQLNP</aaseq>

Gene Sequence

<dnaseqindica>1..198#300..533#621..813#914..1055#1148..1279#1371..1603#4443..4522#5229..6062#6148..6294#6399..6446#ATGGCGCCCCTTTCGGTGTCGGCCATCCTCGCGCCGTCGCCGCCGCCAGCCCAGGCGGCCGCAAGGGCCTCGCCGCGCCGCGCGCCAGCGAGCGCCGCGCCTGTCGCCGCCGCCATTTCGACGGCATTGCTTGCTTTGACTCCTGCCGCGCACGCCGCGGCGTTCTCCAAGGAGGACGTCGCCGGCTCCGTGACCAAGGTACGCGAATGGCGAATGCCACTACGGTGCTCGCTCTCGTCGGAACTCTGAACTCGTTTCGCGGCATTGTGGCCAGAGTGCTTGATTTTCTCGATGCGTAGGTGGTGGACACGGTGGACCAGGTCATCGGCGTCGGCGGCAAGGTGGCCGAGCAGTCCGCCGGCGTGCTCAAGGCGCTGGGCGAGGCCGCGAAGCCGGCCCTGCCTGCGCTGAAGAGCGCCGGCGAGCAGGCGCTGAAGCTCGCCTCGCCGGTGGTCTCCGGCGCCTCCAAGCAAGCCACGGAGGCGCTCCAGGGCGCCGGCGTCGACCCCGCCCCCGTTCTGTCCGCCGCTAAGGTAATACACCCGACGTCTCAGCCGCTCCGAGCAAAGCTTCTTTGATCAGCTCCGTTTCGATTCGGTGACGATGCTCCGTTTCGGTAGACCGTCGCGGACGCGGCGCAGCAGGGCACGAAGGTCATCGACGCCGCGAAGCCCATCGCGTCGGCGACGGTGGAGACCATCGGGTCGCTGGGCTCCGCGGACTACGTCGTGGTCGCCGGAGCGGCGTTCCTCGCGTACCTGCTCCTGCCGCCGGCATGGTCCCTGCTTTCTTTCACTCTCCGCGGCTACAAAGGTAGCAGCACAGCACATTGCGAATTGGCTATTGAATTGCGCCTCTTGCACGCTTTGCTTCGTTGGATGATTGCTCACTTCTTTTTTTTTTTTTGGTTAAGGTGACCTGACCGCTGCACAAGCTCTGGACATGGTGACCTCGCAAGATTACGTGCTGATCGATGTGAGGACCGAGAAGGACAAGGCCAAAACCGGCGTGCCACAGCTCCCCTCGAACGCGAAGAACAAGCTCATCTCTATCCCGTATGCATTTCTTTCCATTCCTCAAGTGGCACATAGCCATTGTTTTTTTCCATGGCAAAATCCAAAACACCTTTGCACTGATGTGATCTCAGGCTGGAAGAGCTTCCAAGCAAGACGAAGAGCATGGTGCGCAACGCGAAACAAGCCGAGGCGGAGATCGCCGCGCTGAAGATCTCCTACCTCAAGAGGATCGGCAAGGGCTCCAACGTCATCATCATGGACTCGTCGGTGCACTGAAACCAAGCGATCGATCGTTTGAATTGCCCTGTGATCGATGAACGACAATTCTGAACTTACATTGATCGGCGCCTGCAGGTATTGCGACAGCTCGAAGATCGTGGCGAAGACGCTCAACAGCGTCGGGTTCAAGAACTGCTGGGTCATGGCCGGCGGCTTCTCCGGCAGGAAAGGGTGGGCGCAGAGCCGGCTCGGGACGGACTCGTACAACCTGTCGGTCGTCGAAGTCGTCACGCCGTCGCGGGTAATTCCTGCGGCCGCTGATCGGCTCGTGACGGCTTCGTCGTCGGCTTCACGGACGACCACGAGTCGTAAGCTTCTTCCCGGCAGCGTGGACGGCTGAAAGAGGCTGGAATAGTCACTGTAAATCCCATATTCACCTCATGTTCTAGTTGCAACTCTCGTTTTTTTTTGGGGGTTTTTCAGTAATTTAAAAGGGAGAATCCGTATAAACAATAGTTGTGCCATGTGTGATATTCCAAATCGGTTTGAATCCTGTGAAAAAAAAAGATTGGCCCCAGCTTTCCATTCATGCATATGCTTATATGAATCGCTTATCTATTATATTATTAAAATAATAGAAAAAGAAGCCTCCACGTTCGCTCTCATGGCCTAGAAATTCTCACATTAATTAATTGGAGAAAAAGAAAAAGCAGAGTCCATATAGAAATACAATTTAGAAATTTTTGAAATTCGGAATTAAAAAATAAGAAATATTAGAAGAGGAGACTAGAGTCCATATAGAAATATAATTTACAAATAGCTGAAATTCGGAATTAAAAAATAAGAAATATTAGAAGAGGAGACTAGAGTCCATATAGAAATATAATTTAGAAATAGCTGAAATTCAGAATTAAAAAATAAGGAATATTAGAAGAGGAGAATAGAGTCCATATAGAAATATAATTAGGAAAGAACTAAACTTCGGAATTAAAAATAAGGAATATTATGGAGTAGAGTATAGAGTCCATATAGAAATACAATTAGGAAATAATAGAAATTCGGAATTATCAAAAGGAATATTACAAGTAGTAGTATAGAGTCTATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGTTGTCATTGTAATATATTTTAATAATATAATGAGAAAACATATATGGTATTATATGAGAGAAAATATAATGATGCTAGCCGTGCAATTTGCGTGGGCCACCATGCTAGTTAAAAAAAACAGATTTGCTAGAATTTGTGGATAAATAGGTGACGTTAGCAACATAAAAAACAAATTGTAAAAACACTACGATGAAAATCCACAGAATCAATTTAAACATTAAGTATTAGATAGAATTTAAATTTTGGTTTACAAGTATATATAGGTAAGTACTCCGAAGGCCCTTCAATGTCATCGGGATAAAAAACATCCTCGAACCGTAAAACCAGATATGCGGGGTCCCTTAACTATACAAAACCGGTCACCCGAGATGCTTAGATGGTTTTGACCCCGGTTTTGGTCTACATGGCGGCTGAGTTAGCGTGGGACCCACGTGGGCCCCACATATCAGCATGGCCACGTCAGCCTCCTCTTTCTTCCCCCTCCTCTCCCTTCTCTCTCTCACTTCTCTCCTCTCGGTCTCGGGCAAGCCGGGGTGGGTGGGGAGGAGGTCGCCGGGGCGGCCGACGACTCAGCGGCGGGATCACGAGGGTGTCCCGAGCTCGCGGATCTAGAGCCGGCGCCGGCGAGTGTGGCGGCGGCAGAGAAGTCTGGGACGGAGGAGAGGAGGACGGCGCGGCTAAAGACGGCCATGGAGTGGCGGCCGGTGGGGAGAGGCGCGCGGTGGCCGTCGGACGCGTCCCATCCTCCTTCTCACCGGCTAGCCTATGGTGGCAACGGTAGGGGCCCACCTCAACCTCGCCGGCCACACCGTCCTTGGCTGAAGCCATGGCAGCAACGCCGGCCAGCAAGGACGTCGAGACCAGCGCCGGCGCCGCCGCATCCACGGTCGTCGTCGTTGCCGCGGCAAGCGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCACCCGTCCTGCCCAGAGCTAGAGAGAGAAGAGGAGGATGGGAGAGAAGAGGGGAAAGAGAGAGTATGATGTCCTAGACAGGGCTGACACGTGTGGGCCCATGTATGTCCTACACTGACTTAGCCGTCACGTATGATAAATCCGGCGTCAATACTACCCTGTGACCTCGGGTGACCGGTTTGTATAGTTAAGTGGACCCCGCATATCTGGTTTTGCGGTTCGAGTACGTTTTTTTTATCCCGATAACAAGTTGAGGGACCTTCGGTGTACTTTTTCCAATCGAAAATGATGAAGCTTAGTGGGCTGGGCTATTTTTGTGGCGGTTTAGACTAGATGTGCGGCTACACTGCCCGTAACCGTGCGTTGGATCACCAGTTGCGGCCCATCACCTCTCCCAGTCTCCCGGTCGGTTTCGCATTCCCGACGAGCCGCCGCCGGCATCTCCTCCGCTCCGCTTGATGTTTACTACTCGGAGACGGGGCGCGGCGGCCGGAGCCGAAACGACCTCGTGCAGCCATGCTCTCCAGCCTCCTCTCTGCCCGGATCCACGGGCTCCCTCGCGCCTAATATTCTAAACTTCAGAGAGGAGAGGAGCGGAAGGCTCGATCGATTTCGTCCCCGCCGATTTGCGCTATCCGAGGTATCATCGTGTCCCATGGGGGATCTAGCGTTGATGAGCTTTCTGTCCGGGAAGCGGGAGCGACAGCGGCAGCTCTGCCACCGACAAATTGGACGAGGCCATATGCATCTTGCTCCCCTTCCCCCAGCCTTCTCTGCAGGGATCCTCTGTTTCTTTTCAAAAACAACTCGTCTACGGTTTCTGAAATTATTTACTGTTTTTGTTATTGTTATTTGTACAGAAGTTGAATGACAGAAAAAATATATATACTGTTTTTGTTCTCCTTTTGCAGAAGTTGAATGACAGAAAGAAACTGGATATAACTGTGCATGTGTTGTCTTTCTTTCTTTTTTAATTTCTTCACCACTGTCCCTACTGATTGTAACTTTGAATCTGTGATGTTACCATAGGTGGCTCAATTACTTCAGTGGCTAAAACTGAAAGAAAGGGTCTGCACTACCAACTAAAAGAAAACGTTTACCTTCCAGAGGTATGAAATGCTGATAATATCCAGTCTATACAAATCACATGCATCTTTTTCAGTTATTCGCTTTATCGATTCACTTGTCGGTCATGTTGTACATTAGTATAATGAAATTAATCGTCACATGAATGCACATATATCATTCATGTTGCTTGCCACCGGCCTAATTCAAAATAAGATTGCAAACCACTATTCTTTTCTGCTGATCAACTCAAAACTAATTAAGCACGGCGAATGCTCTATACATGTTTCTAGGTGAAGTCAAAGATGTCTGAGGGATGTTTTGGTTGCTTAACTTTGCCAAACATAAATTACCGGTTGAGTTTGAGTTAGTTGTGCAGCTGCATTTTTGCCAGTGATTATCTATCCTATTTACTGAGTTACATTATATTACTAGGCCAGGAAACAAACAGGGTTCGGCTAGCCATTTCTAGCCAAACAAACAGGGTTCACCATCCTGAAATGTCAAACAAGCACTAATCACTAATGTGGCGAAGGAAAAACCTCAGCAAAAGCTCATGCACAATCCACCCACTACCTCCTGCCCTTGTATGTAATACATCACATCAGTGCAATTTTGCTCAGAGCACCCTAAAGAACGGAATTCTAGTATTGCACTCTATATGTATGGCCCAAATTTGTTTGACCACGTTGAATAAACCACTTGTTTTTATAATTCCTTTGCTAAGATATTCTTGTGATGTGCATTTAGGACATCTTGCGGCTGATCCATGCCATGATGCCACTGCGAGATGCTGCTCGTGCTGCTTGCGCCTCGCACATATTCCTGCAGTCCTGGAGATGTCGTCCCAACCTTATCTTCACTGGGGAGACGTTGGGCTTGATTATAAATGGTACTGGAAAGGATGACGCTAAAAGAGACTTCATCAATATAGTACAGCGCATACTGCTGAATCACTCAGGCATTGGCGTGAAAACACTAAAGCTTGAACTCCTCCATTTTAGCGATCTCGACTTTGGTTGTCTCGAAGCCTGGCTTCAGATTGCTGTTGCACCAGGGATTGAGGAACTCACCCTGATGTTTCCTTGCGTAAGATACAAATTCCCATGCTCGCTCTTATTTGAAAGAGGTGGAAACTCGGTTCGATATCTTCACCTCATGGTCTGCACCTTCCGTCCTACAATTGGTCTTGGTTGCTTGATAAAATTGACGCAGTTGCATCTGTCTTTCGTGTGGATTACTGGAGATGAGTTAGAGCTCCTTTCCAAATGCGTCGCTTTGGAGTGGCTGAAACTCTCATATTGCCCTGAGATAATTTGCTTGAAAGTACCTTGTATGCTAAGGCAGCTTGGCTCCCTTGAGGTGGCTGAATGCAGATATTTGAAAGTCATAGAGATCTGTGCTCCAAATCTTTCAAATTTTTATCTTACTGGTTTTCTAGTACGGACTTCATTTGAGAATCCATTGCTAGTGAAGAAACTACGAATCATGTGTTTACGTCAAGGCAACTTTGTTTCTTACTCTCGTACGAAGCTTCCATCCCTTGTGCCAAATGTTGAAACACTTACAGTAGCATCTAATGAAGTATGCTCCGAAACTTATATTTTAGAGCAATGCTATGCATATTATGGCACCTGAATTTAACTAACATGAGGCATCTCATGTGCAGATTGTCAAGACACCTATGGTGCCCGGCAAATTCCTCCATCTCAAGCACTTGCATGTTTATTTTATCTCACTGGCTATTTCCTATGATTATTTATTTCTGATTTCCTTTTTTGAAGCTTCTCCTTCACTGGAGACATTCATGTTGTCTGTAAGTGATGGTTCATCTTGCTGATATGCGTTTATTCAATTTTCTTGGTTTTCATCTGTTGTTGTTAACAATATAGCATTGACTTCATAACTGGTTTTGTGCAGGTGACGCAGCGTCGCATTGAGAACCCTTTCATCCAGCTCAATCCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005687