Os12g0518100

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Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0518100| Description = Conserved hypothetical protein| Version = NM_001190053.1 GI:297729236 GeneID:9271628| Length = 11195 bp| Definition...")
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Gene Name

Os12g0518100

Description

Conserved hypothetical protein

Version

NM_001190053.1 GI:297729236 GeneID:9271628

Length

11195 bp

Definition

Oryza sativa Japonica Group Os12g0518100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:20273164..20284358

Sequence Coding Region

20282081..20282485

Expression

GEO Profiles:Os12g0518100

Genome Context

<gbrowseImage1> name=NC_008405:20273164..20284358 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:20273164..20284358 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggctcgcagcgggcgacggatgcggggtcgcggccgcggccggggtgtgcctcgctccaggcggtggtgtccctcccgactccccttctcctccccagcctcctcttaacggatctggcggctcattgggagttagcggtggtggcagcacggtagaggagaagggagttgcggcggcgacggcgacggcgacggcgacgacgcttgcgagcggaggttggcgtcttggcgccggatccgccggtgaggagaccggggtcaccggatctgacggccccggcctccttactaggagatccgacggctcattgggagggagcggcggcggcagcacggtagagaagagggagctgcggcggcgacggcgcacgcgagcggaggaggcgggcgaaccgacgtga</cdnaseq>

Protein Sequence

<aaseq>MRLAAGDGCGVAAAAGVCLAPGGGVPPDSPSPPQPPLNGSGGSL GVSGGGSTVEEKGVAAATATATATTLASGGWRLGAGSAGEETGVTGSDGPGLLTRRSD GSLGGSGGGSTVEKRELRRRRRTRAEEAGEPT</aaseq>

Gene Sequence

<dnaseqindica>8918..9322#atcgaacaagtgaacagaaaaactattcctccctaactactgcatcttcccctgctccaagttctctctgttcctccccttcttcctaccccttctctctgttcgaatctgctcctctaatcccaaaactcccaaattcgcaagcagattcgtaacaataggtatcagagccatccatcctggagtacctcgacaaacctagataccattcccgtgcgcaactcaagtcccaagagatggagcagcaattggcggaactcgcggcggccatggcgacaatccagaagcagaataccgccatccaagcttcgatgggatccttggaggaaatcaagcctatggtggtggaactcgcgagctggaagccagcggtggacaaggccatgacggagatgcgggacgacctcggcgacctgcgtcagcaagtggagcggatatcccgcaatccgattctcgccgtcaagccagcggatctgccccctcttctacccacgccgacggtgcctcaaatctcggtgccgaaggaggaggagacggcttccaaaggggcggacgcgagtccagggccgttaggccatggcgttgcaacgatgaatcgggggaaggcgtctggagatgatttctctccaacgtctctcccggccaagggtacgtgtcaatttcagtctccatctcgtgttcctttcgaattcggggagagttcgaattgagtttttgcttcggggttccatgggggtaatgctagagtagattgcccacagtttgaaggagagaaccctagagcctggaaaatgaaatgcgaaacctatttccgagtgagtgggattagcccggatgtgtgggttggggttgctgctttgcaattttcgggaagtgctcttgtgtggttgcaatccaccaatactcatgtggaattgatggggtggaatgatttctctgaggctgtttgtgctaagttcgggagggaggaatttcagagtctcattagacagttcaagaggcttaggcaggagggaaccattcttagttatgtagaaaaattcaatgagcttatgcatcaactctatgctcatcacccgtcctggaattcagtattcttcattactgaattccttgatggactgaaacctgaagttagctcagcagtaattttacatcgtccaaacgatttggatactgctgtggaccttgcttgtttacaggaagaggtgttggaagcgggacgacgggattcgcatcggattgatggaggtttttctcatcggaccggacaacgccctgtggggaatgttgcttttactcctgggcgagctggtgggcgagttgatgacagaactcagcctctggaggatcgagtggcagcactacgtgcttatcgcaaggctaagggattgtgtcacacttgtggggaaaaatggagtagggaacataagtgtgggccaactgtgcagttacatgttgtggaggagttactcgacctgcttgaggaaccggatggggaagccaaatccgctggaactgatgagctaacagaaaaggcttctgaaactgttagcgaagtctgtcagatatctaaagaagctatgctagggactgaatcttctggaactttgaggctgcaaggattaatacaacagtatgagataatgatgcttgtagactctggcagcactcatagctttatatctgaagaaatggcaagcaagataagaggcaatcagaaaactgtgcaagcttttcgagttcgggttgctgatgggggaatactccaatgtaacaaagaaatgcagaattgtctttggctggttcagggtgtttcttttcagaacaacctgaaggtgttacctctcggaagttatgatgtgatacttggaatggattggcttgagcaacacagtcctatgcaaattgattgaagggctaagactctgagattcaaacatgcacaaaaggatgtttgtttgcgaggtgttcgagctgataccagcagctgtacatctctatctgtcaatcaagttcaaggactgattcatcgggaagctgtgatgcaagtggttgagttgtgttctctgatcaatgaaacagataatacagaagtacctcaggctgtcgattagttgttgaaagaatttgtccatgtctttgatgagccaaaaggtttaccaccggccagagtatttgaccattcaattcctttactgccaggagcaaaacctgttaacttgcgaccttattgatataatccagctcaaaaagatgagattgaacggcaagttgcggatatgctccaacagggaatcatacaacccagctctagtcctttttcatcacctgttctgctggtgcttaagaaggaccttacttggcgattctgtattgactaccgccatctcaatgcaattacagtcaagaatcgatatcctttgccaattatcgatgagttgcttgatgaattagcgggatcctgtttattcacgagtttcgatttaagagctggctatcatcagatccggatgcgcccagaagatgagcacaaaacagcgtttaagacgcacaatggacactacgaattcagggttatgtcctacggccttaccagtgccccggctaccttccaagtactgatgaatcagatcttagctccattgcttcgcaaaggagtgctggtgttcacagatgacatcttaatctatagtcaaaatttggatgaccatgtagctttgttgcgacgggtgtttcaattgctaactgatcatcaacttaaggtcaagagaagcaaatgctcgttcgcccgtgcaagtttaccatatcttgggcatgttattagtgcagaaggtgtggccactgactcgaagaatattcaagcggtgcacaactgggcagtaccctgtaatgtgaaggaagtgcgaggatttttgggtcttgcagggtactaccggaagtttgtacactcttttggtattatcagcaggccccttactgatctgctaaagaagaatgtggtgtttgtttggacgtcggagcatcaagcgtcttttgatgccttgaaggaagctctagtttctgctcctgtcctagcactaccggatttctccaaagtttttgaaattgagaccgatgcgtctgataagggtgttggcgctgtgttgatgcaagctggccatccgttagcctttctcagtaaatctttggggcctcgaaatcaagggctgtccacttacgagaaggagtgcttggcgattctcctcgctgtggaacaatagcgctcttacttgcagtttggagagtttataatccgtactgaccagcgcagtttgattcatttggatgatcagagattagtaacaccttggcaacagcgtgctctgaccaaactgcttggtttacaatacagaattgtctataagaagggactggaaaataaagctgccgatgctttgtcacgcaatcagtcaaccgatgtgtttcagctcagtgcggtgtcttcctgcattccagtttggttggcagatgtgcagctgggatatgctcaggatcaagtatcctctcaactgttgactaaactctcgtttaagtcctgaggcgctccctgagtacagattacagaatggcattatctaccataagggaaggatttggttgggtaacaatgtggagttacagactaaagttctgactgcactgcacaacgcagcaattgggggtcattctggtactcaggcaactttcagtcgagtgaataagttatttgcttggcctggactcagaaaagctgtgcgccagtttgtgtcggcttgttccatctgtaaacaggccaaagcagaacgggttcggtacccaggtttcttacagcctcttccagtgcccgagcatgcttggcaaacagtctcgttggatttcattgaaggcttacccagctcatcgggttttgattgtatacttgtggtggtcgacaaattcagtaagtatgctcactttgttgctcttgctcatcccttcacagccttcgacgtggctctggcctacctcaacaatgtctacaagatgcacggattgcctcagcatctgatctctgatcgagatcgtatctttaccagtgcattgtggaaggaactctttcagttggccgacactcaattgcaaatgagctctgcttatcatcctcaaacggacggacagaccgaacgggttaatcagtgcttggaaacctttttgagatgttttgtgcacgcttgcccaaagaggtggtatcgttggcttgctttggcggaattctggtacaatactgcctttcattcggctctggacaaatcaccatttgaggtattatatggtcattctcctcggcattttggtgtgttcgatcgctttgagtgtgctgttccagatttgcaagactggttgaaggaacgggaagtgattaccagtttgccgcgacaacatctgttacgagctcagcaaagtatgaagttacaggctgacaagaaacgttctgatcgtgagtttgcagttggtgactgggtgttcctgaaggcacagccgcatgctcagttctctatgacaggacgttctaatcacaaattggctttccgttattttggcccctttcagatcttggcgcgcattggaagtgtggcttatcgccttcaactaccgacaacttgtgctattcacccagtagtacatgtctcacagctccgtcaggcttcttcaccagctcctgactcgtcgattcaagacctgccagcgttaactgaagatgaagcgctaccagtccaaattcttgctcgtcgtgcagtcaagaaaggcgctggagctgtggaacaactcaagattcgctggtctggtcagacgtccgctgaagcaacctgggaggatggtgctgcactgcgtgcgcgtttccctgaagcaccggcttggggacaagccgtttctgaagaagaggggaatgtcaccggtactgtaccaggtccgacaatgcctacggcaagtaatccagtgaagacgcgaccagcaagagaacgcatgcctaatgtaagagtaactgggccggaatggacttaggtccagaatgtaaacgtgcgagtatataagcacgagtgagcagaggggaaaaggcatcgaacaagtgaacagaaaaactattcctccctaactactgcatcttcccctgctccaagttctctcctctgttcttccccttcttcctaccccttctctctgttcgaatctgctcctctaatcccaaaactcccaaactcgcaagcagattcgtaacagcggcgccaccgcttcgacggcatggtggcccgcgccacgtctctcgccgacggcaagaagccgaggatgtgaagcagcacgtcgtcgttgagctcgctgatgatgtcggcgtccaccgccggcggcgtcacgtcgtgcgtgttgttggatgaagccatggatgatggtgattgaaacgaaagcttgcatgaagccatgaaatttgttggtgtgaaatacatagagggtcgaatcaagctcgggatacatggtcgaatcggagtctcgatcgatcgatgctaattgcactcccagtagggattcgttctgttattgatagtactagaaagaaacacgcgctacgccgcgtgtgatatgaattgatcaaaatgcacaaagagtctgcttgtccttcatatatagagttgtgcatatatggagtgaaataacctttgaccatcatcacagtgtgcatttatgataatcaggtttttctacataagcactattactctataatgttgaccaaatttgcaaacaaactatactgtagacgaaccatttagagaatacatatacataattttatataggcaacatttatcgaatttaatctaaaatcacaaagaaatcttattattaaaaaaggaatgacataagtattacaaaatactgaagaaccacagtgttagacgtctactggcgcggtgagagaggagcggtggcattttgactggttagcacagaacttagaaccgcgaagattgaccacaatagaatcaatttgtaactattatccttgtgaatatttaattaagagcaaaacacaatgacattccatagcttgtgagtggctaacagtagtacggtccattgttaataaaattattggtaagctaatcatacaatccaaggaacttctcacagaaaaaccaataagtttgataacaatattggctgacgggaataagtagataattaaacagagctaggtagataatgaagcaaggggaaaaggatgtacagtgattgttacaataatatgatattattgcgtggcaaaatgtctctccattgtaagaaaaggtgtgaaaaatgtacatgcaaagaaatccatatgtaggagacctaaagctaccaaaattttggatcacgaaatctccatgtcatggtactaaataaataatccaccatggggcaactgcaaattataagtgccctatcaagcgatcaaaacatatgtggaacattgtgagaaataggcagtaatttgtatgttttatcagaggttgtatagacaaaaatgagagaacaaccacatgcagaattacatatagcattttgtttgggcaaaactggaagtctcaaacaaaacttacctatggatatgttgtaccaatgaatggataactcttgtttcatgttggaaacatgcaaattgggagctctagaattagtttagctattcatcattagctctgcaggcacaaactattgattcccagtaggctatactatcctacaggttcaggaacaccacaataaataaaggattgagcatattactgaaataaaacagaacattagcctaggttcatcactgaaactccaatgcaagcacaaatagtccttgaagggcatgccatgtcaattatgcaaaatgacagacattgctagaaattcatatagcataccttggcagtggattttctataaagcaagaactatttttttaaagaaggaaagcaaggcaatactatgcaaccattggagtaaggagatgatgacagcaaatttcatttacaaagaatgccaatatatatatggccatgtccacaggccaaccgatgctatccacctcctcaccaatgctagtgctattatacttgcagaacgaacacacagagagaaagcagcagtaataaagtgaattgctaattttgtgtaccaatcattcctccactgatctattttgctagtatgcgcattggtttgcgtgtacatcatgagagtagtattaccagcaatcaaccaagaaatataaaaccaataataatatcaaaatgtgcatgttacatcttgtgtgagagagttggcaaatatgacataccatggctaaagcatgccttctccagaccatacaaaaacacatgatacatgtctacctgcagctaatattaacaggttaattccagggataagtgaatttgtaaaaatcgaacaaaaaataatttatgactaacccatcatccgattgagggggatggtattgtggctctgtgagatataaacagctgttgttcataaaaaggagaataaatgtgagaaggagaaaggaggcatagctgctgacctggggaaggagtaatggaggagcacatttgaacagtgaccttggctgggagatagaaatgaccttgaagattttgaggtccgggaggcccaaatccatggcgcatcatcggcgaaacctgacctcctgctgtgcaagcagcaccatcgtcaacaatctttagcctaattagcctaggaacagcggcacatttggcattgagcaacccgcagaatatcaactaattaggctcaattcataggataacaacccaaaagctagtaaatgcaaccagagcagtgaagggtctggggaagaaccaccaccacctcatcctgccactccgtaatcttctgcatgtgctagctgcatgacagaatacataaatcatttcattaggcaccatgtttgctccaagatagaacaaattttcagtgcaaagcgatcctctttggcacacacctatttgcaaaatatcaatcaaagagcactaattatttccccccccccaaaaaaaaagagcactaattatttgctccaaaaactcacctgcagacaatatgatagtattatggtgggctatacaggagaggcaacagagaggacagcttcttctcatcctaatcctcctctacgccatcgccgtacccagtacacagtccaaactcgaaacccacatttaaatcaatgtaattgctcgaaccacacgcccgttgatgaaaggtgaaaacacagggagctaatccacgcacggacgcacctagccgcaggctgcgccagtgacccgtagaactcgatgcgtcgtcaccaagccgaagacctccaagaaactgttgcggagccgcagcaacctcaaatcgctgggacctccagcagcagcagccacagccaaatccctcagctagaggctccaacgacgccgctaggtccccgacctcgaggcgatgttgaaaccgccgttgagcccctccatcaagcgcagccacgaccatacactcgaggggagcactcttagatgacgggtaaaacgacggcgctggaaaggccttggaggaggaggaggagtaggagcaggaggcggaggagcattggcgccgcgccgccgccggtcacagaagggagaaaggagatcccaactgctcctaccacattcttctactggagtggcccctgagcaagaacccgcatcaagtggggcgaagagggagagaagaagaaaagggctatgacgctggcttacctccgtcgtctttgggtagccggatacatcggcgagccagccgatggtcccgaggcggatttggcgccgcacagaccggggcagagatgcggctcgcagcgggcgacggatgcggggtcgcggccgcggccggggtgtgcctcgctccaggcggtggtgtccctcccgactccccttctcctccccagcctcctcttaacggatctggcggctcattgggagttagcggtggtggcagcacggtagaggagaagggagttgcggcggcgacggcgacggcgacggcgacgacgcttgcgagcggaggttggcgtcttggcgccggatccgccggtgaggagaccggggtcaccggatctgacggccccggcctccttactaggagatccgacggctcattgggagggagcggcggcggcagcacggtagagaagagggagctgcggcggcgacggcgcacgcgagcggaggaggcgggcgaaccgacgtgaattctttcgaaataggatcttttaatattttagtttgtaaatagagttttgatggcaaattctcactagtaaacaaatacaaaagattaattcttagaaatgattttcagatatcgattaatattagataaaataacttcctccgggaattatccctaaaggggtttcctttaaatatttagtgattataaatactcataaaacaaatacccaaaaaggggttccaatttatagagacagggtttttaggaaaatgatttattttcacaaatactttcttatttcataatcatggttccttaataaataatattttaattcaaaatagattttattcctagatttccgtccttgtgtcccaagcacaacaaaaacggatagtcagatccaataaacttcggcacgaaggaaattagaaaaagatttttggttattccgaattttgtttccgtatttcaaactcgaaatttttagggtgttacaatagattactctaacccgcccataacaactaaggtggaattaattccacgatctcataacacagtaacacatgagccaaattcaaataggccgatgtcacctaatttaaggtgactaaataaaagggctgccatgccaaaaaaaattatagttcttggacgtgcaaagctgccgaccctgtcaacgtcgattctttgtcctgatctgttgtagtatgttgttgctctctggggtagatatgtgtagatttctcaatatcgtcatcggtgacatcgtcagtctcattgccctctttgctcttaccccacagcatggtgtaaagacttccgaccagcaaaattccacccaagatgctgccaataaaggaagagcggaaaatgaaagtttgtttatttcagagtgtttttagaatattgcacctttgatcagttgacagcaagtacatatgatttaacttacctgccgaggtgaacaatctctccaagaaagaaggatgagcaaaatattgtgaacacgaaacagagtggcgtccaggaggcgaagaacatggggcctctcatctctaggcaccacgtttgcaggtagtaggacactcccgtcaccataacaccctgaagcaaaccaccagtcgtctaatagtcagatgcgtgtgcagaagaccatgccaatagtgaatacgctagtggaagaggatgactgaaaattttatgtacagaacttaccgagtataggatggcaagcaagctgatgtcgaatcttagcttccatttggagaagtcgcgctctgcgaccacggcgacgacaaacgactgcaccgtgctgaacaagcattgagtcaaagtcacaatcattttatctggatattccttttgcaccgctgcctgcacagtcaatagacaaggagtggagacctcgattcatcagcaattgcagatgtggatcgatgcagacaagcatgcaagaacagctcagattttttttaaataactaaatatgcatgcgaacctgaaaaatgatccacaaagaccagcacatgttggcgatcaccataaggaatgtccatttgatccacacacccctcggaactacatttttagagcctgcgtcagaggcgaaggcacggtgatggttgatagggcttatggatgggccggtgaagaaggcgatggtgaagactccagccaggcagagtgctacgctagtgaccttggctatgcctgaagagctcctcagcttcacatactccgtcctggcaagcaacatttcaatcctggtattatatactactccatccattcaaattatgtgtgtcgatatagtgtatatctaaatatgtatatcaaaatttatgattaatgtcaaaacatcttataattaatgttttcacaac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0518100, RefSeq:Os12g0518100