BGIOSGA005758

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Revision as of 02:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005758| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005758, complete gene.| tag = OJ1311_...")
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Gene Name

BGIOSGA005758

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005758, complete gene.

LocusTag

OJ1311_H06.9

Ensembl Transcript ID

BGIOSGA005758-TA

Ensembl Protein ID

BGIOSGA005758-PA

Length

7487

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31237328..31244814

Sequence Coding Region

31244692..31244814,31244132..31244290,31243644..31243710,31243438..31243545,31243140..31243224
,31242663..31242717,31242021..31242422,31241403..31241459,31240441..31240539
,31240252..31240362,31239788..31239859,31239536..31239652,31239052..31239201
,31238460..31238560,31237328..31237670

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31237328..31244814 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31237328..31244814 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGTCGAGAAGAAGCCTCCGCCGCCGCCGCCGAGGCTGGGACCCCGCGCTCACCGGACCTCCACGACCTCTCCGACGACTCCGACTACGCCGCCGCCGCCGCCGCGTCCTCCAGTCACTCGGCGATGCGGAGCGATCTGGTGGATCAAGGGTCGGGCGAGACGGCGAAGGTGGATGTGGTGTACGAGAAGGAGCGTGTGACGATCCACCCGACGCAGTATGGCTCCGGCCGGATCAGCGGGAAGCTGCGCCTCTACTTGCAGCAGGGCTCCCTGTTCCTGAGTTGGGAGCCAAATGAGGGAGTTGATTCTTTATCAAGCAATTCAGCTACCATGGAAATAGAAAAATATAGAAACCTGTACACTATAAAGGCCTTGCCATTAAGTGATGTGCGCTTCATCCGTAAGCACACCCCGACATTTGGATTCGAGTACATAATCATTGTTCTCTCATCAGGATTGGCTTTTCCTCCATTCTATTTCTACAATGGTGGGCTTCGTGAATTGTTTGCGACACTAAAGAAGCATGTTTTTATTATCAGGTCGGACGATGATCCTAATGTATTTCTTGTCAACGACTTTCAAGATCCTCTACAGAAAAGTTTGTCATCACTGGAGCTTCCTGGTGTTGCCACCGTAGCAAATGCCATGTCACGACAGAACTCACTCAGTTTCACTAGTTCAGTTGATGAAGCCGGACATGGGAGTGATGCCAAACATGGGGCATCTTCTAGCATGACTGAATATGTCTCAAAGCAAAAGCACAGATCGAATGATCCTGGTCGTGATCTTTCTATCCAAGTACTGGAGAAATTTTCTCTGGTTACAAAGTTTGCACGAGATACCACGTCAAGTCTTTTTCGGGAAAACCACAGTAGTGGTGGTCATACTTATGGAAGGCAGCAGCAAGAATATGTTTTGGACAACAGAGCAAATGATAAGTACAAAGATCAGCAAATAACACCAGATAAGGATTCTTTGCTGTCAGATTCAATGGAGTCTAATAAAATTCTAGCGTGGGGAAAACCAAGAGAACAACCGTTGAGTGTTGATGAGTGGAGATCCTTCTTAGATCCTGAAGGTAGAGTTATGGATTCGAAGGCGCTGAGGAAAAAGGTTTTCTATGGAGGGATTGACCATGTTCTGAGAAAAGAGGTCTGGAAATTCCTGTTGGGGTATCATGAATACGATTCAACATATGCCGAGAGGGAATATCTTGCTGTCATGAAAAGAACAGAATATGAAGCCATAAAATCCCAGTGGAAGAGTATTTCGTCCACACAAGCTAAAAGATTTACCAAGTTTAGGGAAAGAAAAGGCCTTATCGACAAAGATGTGGTGAGGACAGATAGATCAGTTCCATATTATGAAGGAGATGACAATCAAAATGTTCTTGTGCTACGGGATATCCTGTTGACGTATTCCTTCTATAATTTCGACCTTGGCTATTGCCAAGGAATGAGTGATTTTCTGGCACCTATACTTTATGTGATGGAGGATGAGTCTGAGTCATTTTGGTGCTTTGCAATTTTGATGGAACGACTAGGAGCCAATTTTAACCGTGATCAGAATGGCATGCATGCTCAGTTACTTGCATTATCCAAGCTCGTGGAGCTTCTTGATCCTCAGTTACATAACTATTTTCGGAAGAACGACTGCTTAAACTACTTTTTCTGTTTTCGTTGGGTTCTTATACAATTCAAAAGGGAGTTCAGTTTCGATCAAATCATGCTGCTGTGGGAAGTTCTGTGGACACATTATTGGTCAGAACATTTCCACCTCTACTTATGCGTCGCGATCCTGAAAAGGTACCGGTCACGGATAATAGGAGAGCAGATGGATTTCGACACCCTTCTCAAGTTCATCAATGAGCTCAGTGGCGAGATAAATCTTGACCGGGCAATTCAGACGCGGAGGCATTATGTGATCAGCCAGCCCCTAACGGGGCTGCCTGCATTCCTCCTGGAACCCCGCCTTCTATGCCCATCGAGACGGACGGTGGCCTCTACGTACAAGAAGACGAGGTCATGTGAGATACCGGCGATTTAG</cdnaseq>

Protein Sequence

<aaseq>MRREEASAAAAEAGTPRSPDLHDLSDDSDYAAAAAASSSHSAMRSDLVDQGSGETAKVDVVYEKERVTIHPTQYGSGRISGKLRLYLQQGSLFLSWEPNEGVDSLSSNSATMEIEKYRNLYTIKALPLSDVRFIRKHTPTFGFEYIIIVLSSGLAFPPFYFYNGGLRELFATLKKHVFIIRSDDDPNVFLVNDFQDPLQKSLSSLELPGVATVANAMSRQNSLSFTSSVDEAGHGSDAKHGASSSMTEYVSKQKHRSNDPGRDLSIQVLEKFSLVTKFARDTTSSLFRENHSSGGHTYGRQQQEYVLDNRANDKYKDQQITPDKDSLLSDSMESNKILAWGKPREQPLSVDEWRSFLDPEGRVMDSKALRKKVFYGGIDHVLRKEVWKFLLGYHEYDSTYAEREYLAVMKRTEYEAIKSQWKSISSTQAKRFTKFRERKGLIDKDVVRTDRSVPYYEGDDNQNVLVLRDILLTYSFYNFDLGYCQGMSDFLAPILYVMEDESESFWCFAILMERLGANFNRDQNGMHAQLLALSKLVELLDPQLHNYFRKNDCLNYFFCFRWVLIQFKREFSFDQIMLLWEVLWTHYWSEHFHLYLCVAILKRYRSRIIGEQMDFDTLLKFINELSGEINLDRAIQTRRHYVISQPLTGLPAFLLEPRLLCPSRRTVASTYKKTRSCEIPAI</aaseq>

Gene Sequence

<dnaseqindica>1..123#525..683#1105..1171#1270..1377#1591..1675#2098..2152#2393..2794#3356..3412#4276..4374#4453..4563#4956..5027#5163..5279#5614..5763#6255..6355#7145..7487#ATGCGTCGAGAAGAAGCCTCCGCCGCCGCCGCCGAGGCTGGGACCCCGCGCTCACCGGACCTCCACGACCTCTCCGACGACTCCGACTACGCCGCCGCCGCCGCCGCGTCCTCCAGTCACTCGGTGCGCCTCTCTCCCCCACCACTCGTGTGCTTCCTGCCGTTCCCCGTTCGCCTCGCCTCGCTTGCTCCCGACGCGAGCGCGCGATTCGGTCGCGGCGCGAGCGAATTCGCTCGATTAGGTCGATGATTTTTGTTGGGAGGTTTTGGGGGGATTTGGGATCCCGCTGCTCATCAGATGTTGTTGGGGCATCGGGGTTCGGGGGTAGTGATCTAGTTCCGCACGTAACTAGTTCGGCAGCTGTCACCTCTTCCTCCGTACATTGATTGGTTTTATTGGTTGGGTGGGTGTGTGCGTGCTATGGATGGCGATGAATGATAGCCTATGTTGTGTTCCCAATTAGGATTGAATTGACGTTCGTTTGGTTGGGTGAACTGAATTTGGTGTTTGTTTGGTGATCGAAGGCGATGCGGAGCGATCTGGTGGATCAAGGGTCGGGCGAGACGGCGAAGGTGGATGTGGTGTACGAGAAGGAGCGTGTGACGATCCACCCGACGCAGTATGGCTCCGGCCGGATCAGCGGGAAGCTGCGCCTCTACTTGCAGCAGGGCTCCCTGTTCCTGGTGAGTTAGAACCCCAGTTAGTCTGAATTGTTGATTGTTCATGAATTTGTGGTAGGTTTTGATATTATTGTTACCACATTTGCTGTGAGGATTGAACCATGGTCCTTTTGGCTTGATGGCCAGGGCATTCGTGTTGCTACTTGAATTATATGTTGGTTGGCTTATATATCTTTGCTTATCATTGTACTCCATATATGCTAATGATACAATATGCTACTATTCCTGCATAGACGTTCCTTCCACATTTTCTGCTAAATGTCTGATATTAGAACAAGAGAACTGAAATTGAAAATCCATATGATTGTTGTTGGTTGGCACCTGAATATGGTTTTGTTACACATGACATGTTATCATATTGGTACTCAAGTTGCTTAATTTTCTTCTTCATTTGCTTATGTCTTTGTTCAAATCTGTGTGACAGAGTTGGGAGCCAAATGAGGGAGTTGATTCTTTATCAAGCAATTCAGCTACCATGGAAATAGAAAAATGTAGGAACAACACAATATATTTCTTTTGTCATACTTGGTAATTGAAGTGCAGCAGTGATTACACTTGACTCTTTCTTTACTTGCCTGACTATGTACAGATAGAAACCTGTACACTATAAAGGCCTTGCCATTAAGTGATGTGCGCTTCATCCGTAAGCACACCCCGACATTTGGATTCGAGTACATAATCATTGTTCTCTCATCAGGTGAAGTGCTCTTCTAGTTGTTTGCTTTCTTGTGGTTAGTTTGAAACTTTTTGGAATTTCTATAGTCACGGTGATCACTGATCACATTAGCTTTTAGGTACTTTATCTTACAGGCTCATTGCATTTCTGCTTCTTCTAGCTACATAATACACATGCTGACAAAAATGAAAAAAAATGATTTATTGTATTGATGTATCTTTTCAAGTTTTGCAGGATTGGCTTTTCCTCCATTCTATTTCTACAATGGTGGGCTTCGTGAATTGTTTGCGACACTAAAGAAGCATGTTTTTATTATCAGGTTTTCTTTCTGGGTTCACTCTAATTAAATAATTAGTCAAGCTGTCCCTTGTTTGTTAGTGCCTAAATTGCTCATTCCTGGAAATGCAAAAATTGCTATCTGGGTTATGAGTGGACTATAAGTGAAATCTACATACAACAAATCTACCAAGTATATCCATAACTGGATTTTCAAAGCACTTTTTTTTTCCTTCTATATGATAGGATACTGTCATAAATATTTAATATTTATGATCTAATTAACCTACACTTGGGAAGATGCTTCACTGGACATTTCAACATATCTAGGAGCGTTTAGTAACTCAGCCTACAGAAAACTAATTAAGTAATGGAGCATTAGAGTGTCATACTACAACCAATCAAATGTTTACAGAAGTATCTTTTGCTGCATATATGATTGGATTTTCTCTACTCTATCTCAAGGTCGGACGATGATCCTAATGTATTTCTTGTCAACGACTTTCAAGATCCTCTACAGGTATGTTATTATACTTTCTTGTAGCCAGACCCATAATTTCTTTAAGACCACCATGCCCTCAATAGAAACTTTACTGTCCTTGGGAATATGCAAAACAATCCTTTTAGTAGGAGTCCCTTGTAAAGCTATATAGTCATCTTTGTTTAGAAGTCCATGTTCTGGCCTATGTCTTGCATAAGTTTAACTTAGAACGATTACTTACCCATGAACCTCAAATCCACTTATTTTGATGCCTTATAGAAAAGTTTGTCATCACTGGAGCTTCCTGGTGTTGCCACCGTAGCAAATGCCATGTCACGACAGAACTCACTCAGTTTCACTAGTTCAGTTGATGAAGCCGGACATGGGAGTGATGCCAAACATGGGGCATCTTCTAGCATGACTGAATATGTCTCAAAGCAAAAGCACAGATCGAATGATCCTGGTCGTGATCTTTCTATCCAAGTACTGGAGAAATTTTCTCTGGTTACAAAGTTTGCACGAGATACCACGTCAAGTCTTTTTCGGGAAAACCACAGTAGTGGTGGTCATACTTATGGAAGGCAGCAGCAAGAATATGTTTTGGACAACAGAGCAAATGATAAGTACAAAGATCAGCAAATAACACCAGATAAGGATTCTTTGCTGTCAGATTCAATGGAGGTAACCATATCTTTTTTTCTATTGTTCTTTGTTATTCGTCCACTACAAATTTTGGAAGAGAGCAACAACAGAACAACTTTTTGAATCACTCACAAGTCATGGAGACAAGCCTTTAAATTTTACTGTTATGGTTAATTCATTTTTATTCTAATTTTTTTTTGTCTGAAAACAGTAGGGGATGCACCTGCGATATATATAAAAGAATAAGTAATACATACAGAGAGAGTAAAACTAAAATACAATTTCATATTCACAATTAGGATTAAGGCCATCTGTAATGAGAAGAAACCTAAGCTAAACTAGTATTATCTTCTGTCATCTGCTCATGTTCAAAACCATTATCTGCCAACTTCCTTTCTATTACTAGAGGTAGTATTAGATGTATCTTCTATGTATTATTTAGCACATATTTGTTGTCACTTTAGTTGGAAAACTTAAAAAAAAATGATTTTTTAAATAAAAAATAGTCAGTTTTTTTCTTCTGACCCCTGGTACTGTCCAAAGCTATTACAATTTTGCATACTGCAATGTGTGTAACATCAGTTTCCTTGATCTTGGCAGTCTAATAAAATTCTAGCGTGGGGAAAACCAAGAGAACAACCGTTGAGTGTTGATGAGGTATTGAATTCTCTGAGCACTTATTTTACATATCTGTCCCCTTATGTTCAAGTGCTCTATGGTGCTAAAATTCCATGTGCTATTATTCTGCTTAGCGTTGCAGTTCAAATAATTACTAGATCTGTAACTCAATCCACAAGATACATCAGTTGTCTAACCTCTAACATACAATTGGATGAGTTCAACATTTGATTTCGGATGTATTTACTATCACAGTAAAGTATTATGATCCTCAAGACAGTCATATTTCTGTTCAATCTTGTGACCTTTGATATTTAAACCTCTTGTTTCTTGGAGTCATTATGTCTTTGGCTCAGACTCTAGGCATATGCCTTGGGGCTTCAAGCAAGCTAAGAAATCTTGCAGGATTTTAGTGGAACTCAGGAACTGTTGCCTCATAATTTGCAAGCCATGCTTCTCCTGGCAGGAGAATTAGCCTTTAGCAGATACTGTATATTTGATACTAACAACTTGTTTTCTGGAGGTATAAATAGATTGAAAGAGATAGTTACATGGAAAATTATTCCTTTTATCCAGTAAACCTCTAGTTATCTGATCATGTCAAGCAGAGGAGCATTGTGCTGGATACACACATGAAATATTGTGCTGCACACACTTCCATTAGTGAAAAGATTTGTTTTACCAAATGGTAGTTTGACCTTTTTCTTCAACTCAACGGAAGGCTAAGATTTAGTCTGGCATTTTACATTAATTAAGAACTGTATGAGTTTACGCTGCACATAATGTCTTTAGTTTCATGGATCTTCACCACCAACCATCTAATAATTATCATGTATTGATCATGTTGTACCACTGTTCCTCTCAGAAACGTCTTATGTTTGTCTGAAATTTTTATTGCACAGTGGAGATCCTTCTTAGATCCTGAAGGTAGAGTTATGGATTCGAAGGCGCTGAGGAAAAAGGTTTTCTATGGAGGGATTGACCATGTTCTGAGAAAAGAGGTTTTATACTTAACCTTGATTTGCTATAACCACTCAACAAGGCATTCTTGTACATGAGTTCTGATGTTTAATATGTAGGTCTGGAAATTCCTGTTGGGGTATCATGAATACGATTCAACATATGCCGAGAGGGAATATCTTGCTGTCATGAAAAGAACAGAATATGAAGCCATAAAATCCCAGTGGAAGGTCAGTCTAGGTTCATAGGTTCAATGTGCTGCAATTCAGTGTGCTTATTAATGCTGGCTAGGACATGCTACTACCATATATATTGAGTATATTTTTAAAGTAGAGCTCAAGTGATGTAGACTGTCATTTGCTTTTGCTCAGTTTTGTTAGATCTGCGGTATGTGATTTTGCTTGATGGGAGCAATGTTTCTGGACATATGATTATCCATTTGCTGTTCTCTTTATCCCTAAGATCATGCTGATAGTTTGCAGTAGTAACATTACAAATGTTAAGACACTTTCAGCTGTTCGTCATAACAACAATTCATGATTCTTTTACATTATGGCATACATTACTCATCTTTTACATGACTATTCATGAATCATGATTCTTCTTGATATATTATTTGCAGAGTATTTCGTCCACACAAGCTAAAAGATTTACCAAGTTTAGGGAAAGAAAAGGCCTTATCGACAAAGATGTGGTATGAATTTGTCTACTTTTTTTTCTATCTGAACTTTTCCTCCTTATTTCCATTTTAGCTTCCTCTCTGACCACTTTTTAGTTTTAACTGATATCCAAACTGATCACTTGTTTTAACTGTTTTTTGGATATCAAGGTGAGGACAGATAGATCAGTTCCATATTATGAAGGAGATGACAATCAAAATGTTCTTGTGCTACGGGATATCCTGTTGACGTATTCCTTCTATAATTTCGACCTTGGCTATTGCCAAGTAAGTTTGCACGTTCTATTACCCTTCACCCGCAATTATCCAACATCAGCTGATGACGAAAACTGCCTGCCAGTTTAAGTCATTTAAGTGAAAAACACTGCATTTGCTTGAAAGCTTCCACTAGATCACATAACCCTGATTCTTGTTAAATATAAGGAATGTATACATGCTGAATCACAAGGCACTGCAGAATATTCATTTGTTTTGTACCCATATTATTACAAGTGACAGGGTTAATCATGCTACACTAAATATTTAGATCTATAAAGCATGAAATTTCGTTGTCTAGGTTTCTTTGTTTGTTTGCTCATGCAGCGAGCGCTCTTTCTTCCAGGGAATGAGTGATTTTCTGGCACCTATACTTTATGTGATGGAGGATGAGTCTGAGTCATTTTGGTGCTTTGCAATTTTGATGGAACGACTAGGAGCCAATTTTAACCGTGATCAGAATGGCATGCATGCTCAGTTACTTGCATTATCCAAGGTATTTTAGAATTTTCCATTCTTCGAGTAGATAAGCAGTATCATAGTATCACAATAGAATTTTTGTTAATCCGCATATCCTGTGCAAATCTTGCCAAACCGTTGTGCTTAAGTCATATCGATTGATTATGTGTGTATCATTTGTTATATGGCTTCATTAATTGCCTTCAATCATGCGATGTGGCCTTCGATATTATGCCAAAAATACATATTATATAGATTGTAAAAAAATGTTCAAGTGACAAGCAGTTCATGTTTATACTTCTTAAACGGCATAAAAAAAATCCCCTCTTAAGTTTTCATAACTTTTCATTATTCCTTATTACTGCCTTCAATCCTTACCATGTTATGATTATCCATTATACAAATGTGTCTGACAAACACTGCCAGCTTAGGTGTCAGAATAACTACTTTTATCAATATAGGAGTATTATACTTTTTGTGACTGCACAATACTAAATTTATGTGAAATTTTCTACGTACCTCATGCAGCTCGTGGAGCTTCTTGATCCTCAGTTACATAACTATTTTCGGAAGAACGACTGCTTAAACTACTTTTTCTGTTTTCGTTGGGTTCTTATACAATTCAAAAGGTAATATTTCTATCTTTCCCTATTTGAGTTGTATGCATTTTGCACCTTAAACAGAAAATCTAAGTTTTCGTCTTTAGCTTTGTAACACTATATTGCTATGTTCTAGTTCCCTGCAGAGCCCATTATCTTATATAGAATCCATAAAAAATATTGAAATCTAGATGATGAATTAATGAAATTCTCTGTAGCTCCAATATTTAGCTACATTAAGCAAATCTAATTCCTCCAAAATGTTCTCCCGAAAATGGAGGTACATTTTGTGTCTAAGAATTAGTGACAGATTTTCACCAAAGATTTTGCCTAGAAGCATGTTTCATTGTTCACACCTGTTGGGCTGTATACAGACTGTATGATAGTACGCTGCTGTCACGTATATCGGGTAAAAACCACAGGCTAGTAGGACCAGTACCTTCAAGTTACCTTATTAGTTGGTCGGTTGGTCCAATGGCATCAATCATCTCACAACAATTTTGAAAGTTTATGAGCTATTCCTTCCTTTATTAACAACAAACTGCTTATGAGCTGGTGCTCAACTGAAATCTGTAAACTTTTGACATGAATTCAAACCTGGGTTAACCTGCAATACCAGCACCAGTGGTAACTTGTCTAGAAGTTAATTATCTTCTGCTATCTACTATACGATTTTAATTACATTAGTTTGCTAAGAAATTTTACACTGCATCATTAATGCAGTACTCCCCACCCAAGCACTTGTAGAGGAAAATGCAGCCTGCACTCCATCCCCTCTAATAGTCTAATTAAGTTACTCCAATTTCTTATGGATCGCAGGGAGTTCAGTTTCGATCAAATCATGCTGCTGTGGGAAGTTCTGTGGACACATTATTGGTCAGAACATTTCCACCTCTACTTATGCGTCGCGATCCTGAAAAGGTACCGGTCACGGATAATAGGAGAGCAGATGGATTTCGACACCCTTCTCAAGTTCATCAATGAGCTCAGTGGCGAGATAAATCTTGACCGGGCAATTCAGACGCGGAGGCATTATGTGATCAGCCAGCCCCTAACGGGGCTGCCTGCATTCCTCCTGGAACCCCGCCTTCTATGCCCATCGAGACGGACGGTGGCCTCTACGTACAAGAAGACGAGGTCATGTGAGATACCGGCGATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005758