BGIOSGA005770

From RiceWiki
Revision as of 02:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005770| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005770, complete gene.| tag = P0680A0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005770

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005770, complete gene.

LocusTag

P0680A05.13

Ensembl Transcript ID

BGIOSGA005770-TA

Ensembl Protein ID

BGIOSGA005770-PA

Length

3535

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31001801..31005335

Sequence Coding Region

31005192..31005335,31004556..31004741,31004331..31004438,31002684..31003882,31001801..31002563

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31001801..31005335 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31001801..31005335 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACTTTAATTTGATCCGGTTATTACCTTCTGTGCTGAAACAGTTCAAGGTTCTTGGATTAAAGATTGGCAGTCATTCATTGTGGATGGAGAATAGGAACAAAGAAGATATGGGTCCATCCCAGCGTAATTCTTGCCCTAAGGTTCACAGCTCAATGTGCAGTGAGCTGACAATGATGTTAGATAAAGTCTCCTCTATTCTTCCATTAATTGAGGCAGCTCGACCAGGATGTAAAGCAGGTATACAGGAATTATGCAACCTATACAATATAGTTGAGAAAGGGAAACTCATAATTCAGCACTGCGTTGAATGTAGCAAGCTCTACTTGGCTATTACTGGAGAGGCGATTGTATCTCGGTGTGAAAGGATCAGAGACTCACTTAGGCGGAGCTTGTTCCTGATTGAGAACATGGTCCCACCAGCACTAGCTAATCAGATTGTTGACGTCCATGATGATCTTGGGGACATAAAATTTGTTATTGATCCCACAGAAGAAGAGGCTGGCAAAACCATTTTAGAGATGCTTCGGCAATCTGATGTGACTGAAGAACTTGAACTTGAGACATTCCTGCAGGCAGCTTCAAACTTAAACCTGACATCTCCTAAATCTATGCTAATTGAACGAAGGGCTATCAAGAAACTGCTTGACAAGATTAGCGGTACTGATCCCAAAAAGGAGGGAGTTCTTAAGTTCCTTCTATACCTTGTTAAAAAGTATGGAAAAAACATCAAACCAGAAACTGGTGAGCGGAATGAAAACATGCAATCTGAAAGCCAGTCTTCGACTCCAAGCTCAAGTTTTGTTAGTGATATCAGCACTCCTGGAAAGTGGTACACACCCACAGACATCCAGAGGAATGAGGATCAGACTAGTATGTCAGGAGCAGCCACACCACCTGCAGAGTTCTGTTGCCCAATATCAACAAAGTTAATGCGTGATCCTGTCATAATAACATCTGGGCAGACTTATGAAAGAGAAAATATTGAGAGGTGGTTTAGGGAGGGATATGATACCTGTCCCAGGACACATATAAAGCTAGAAAATTTCGCGATGATTCCAAATACTTGCATGAGGGACCTCATTTTCAATTGGTGCAAAGAGCATGGTTTCATAATCTCAGATATTCTCCCTCCATCCAAAAATGCATACAGTTACTTGCCGGAGCAATTGCATGGTTACTCCATGTCAAGTCTGCACAATGTTTCAGTACCTCTAATTGCTGGAAAAGTCAGGGATTTTGTGATTGACCATAGCACTTCATCTGTTGCATTATCTGAGGCCAGTTATATGTCAGATTCATATCATGTGCGGGACATGGAGGAACCGAAAGATAGTTTTTCTCAGTTCTCTTGGAGTGCGGACTATCAAGAGTGTTTGTCTTTTCGCAACTTCAACCAGGACAAGTTCCTAAGGTTCTTTTACGAGCTGTCGAAGCTCCCATTGGAACTCCAAGACAGGTCCATTGGTGATTTGAAGATCATTCTCAATGAGGAAAATGAGGCTTCATGTGCTATGGTTTCCAATGGATTTGTAGAGGCATTCTTTGATTTCTTAATGAATGAAGATGGAAGCTACAGTATGCAAGCTCAGAAAGTTGGATTTCAGTTCTTTCGTGTTTTTCTTTCCAATAGCAGGACTAATATTCTACACATGAATGAAGAAGCATTCCGTCTATTTGCATCCTTTATTGATTCTGAGTTAAAAACCGAAGCTTTGCTGACACTTCACGAGCTGGTTCAACACCTGAGTTGTCGACAATCCCATTTGATGGCCTCTATTATCACTCCTTTATTGGAGTCTGAAGATGCCGAGGGTCTCGAGCTTTGCCTGAAGATTGTCTGCAATCTTTCATCTGATTCGGATGTAAAACCATACCTAATTTCACTGGGAATTGTCTCAAGATTGTCACCCATTCTTTCTGAAGGAACCTTTGCTGAGTGTTGCTTGGAGATTTTGCGGAACCTGTGTGATGTGGAAGAAGCCACAGTGCTTATTACAAAAACTGATCGATGCCTTGGTTCCGTTGCAGAATATCTGGACACTGGAAGCCCTAAAGAACGAGAGCATGCAGTGGTTATCCTTTTAGCAGTATGTTCCCATAGTTCTGAGGATTGTTTACTTGTAATGAAGGAAGGTGTAATCCCTGCCCTTGTGGACTTGTCAGTAAATGGAATTGATGAAGCAAAAGGTTGTTCAATGAAGCTACTTCATCTTCTCAGGGATCTGAGGCGAACCGACCAGTTGAACAACTCATGTTCACAAGAAGTGGTTGTCACAGATGTAGTGGAGGGTCCTCCTGACAGTTCAATTCACAAGCAGCCAATACCAAAGTCATCTCGTTTTTTCCAAAGAAAGTTGAACATTTTCTCAAAGCCCCGGTCACTTACGCTATTCTGA</cdnaseq>

Protein Sequence

<aaseq>MHFNLIRLLPSVLKQFKVLGLKIGSHSLWMENRNKEDMGPSQRNSCPKVHSSMCSELTMMLDKVSSILPLIEAARPGCKAGIQELCNLYNIVEKGKLIIQHCVECSKLYLAITGEAIVSRCERIRDSLRRSLFLIENMVPPALANQIVDVHDDLGDIKFVIDPTEEEAGKTILEMLRQSDVTEELELETFLQAASNLNLTSPKSMLIERRAIKKLLDKISGTDPKKEGVLKFLLYLVKKYGKNIKPETGERNENMQSESQSSTPSSSFVSDISTPGKWYTPTDIQRNEDQTSMSGAATPPAEFCCPISTKLMRDPVIITSGQTYERENIERWFREGYDTCPRTHIKLENFAMIPNTCMRDLIFNWCKEHGFIISDILPPSKNAYSYLPEQLHGYSMSSLHNVSVPLIAGKVRDFVIDHSTSSVALSEASYMSDSYHVRDMEEPKDSFSQFSWSADYQECLSFRNFNQDKFLRFFYELSKLPLELQDRSIGDLKIILNEENEASCAMVSNGFVEAFFDFLMNEDGSYSMQAQKVGFQFFRVFLSNSRTNILHMNEEAFRLFASFIDSELKTEALLTLHELVQHLSCRQSHLMASIITPLLESEDAEGLELCLKIVCNLSSDSDVKPYLISLGIVSRLSPILSEGTFAECCLEILRNLCDVEEATVLITKTDRCLGSVAEYLDTGSPKEREHAVVILLAVCSHSSEDCLLVMKEGVIPALVDLSVNGIDEAKGCSMKLLHLLRDLRRTDQLNNSCSQEVVVTDVVEGPPDSSIHKQPIPKSSRFFQRKLNIFSKPRSLTLF</aaseq>

Gene Sequence

<dnaseqindica>1..144#595..780#898..1005#1454..2652#2773..3535#ATGCACTTTAATTTGATCCGGTTATTACCTTCTGTGCTGAAACAGTTCAAGGTTCTTGGATTAAAGATTGGCAGTCATTCATTGTGGATGGAGAATAGGAACAAAGAAGATATGGGTCCATCCCAGCGTAATTCTTGCCCTAAGGTAGAATGCTGAATTACTCCCTCCTTTTTACTAATATTTTAACTATCGTTCAAGCATAAATTCTGTGGCTATTTGCCACTTTCATGCAAGCGAAAGCACTCTTGCAAATGGTGTGGCAGTAACGCTCGTTCCCGTGATCCCAATTTTTTGGCCCTTTGTGGCATGGTGATGGTGTCATGTGAAGCTAAATGCTAGTGACCGTTGAAGTTGTAACATTAATATAAATATCATCATGTAAAAGGAGAAGAATGAATCCTCATATTGCAAGCTTTCAAACCTGACTCTCAAGAGACAACTCGATTTTCTGGGAATGGTGGAATATCTAGACTGAATAATAGAGTTTATTCTCATTATCTAGTGTGTCATTGTAAAAAAATTATGTATTCGTCCTATCCATTTCATATTCCCCATTATTTGTATGTTTCTTATTCGATTGTTTTGCTCTGTTAGGTTCACAGCTCAATGTGCAGTGAGCTGACAATGATGTTAGATAAAGTCTCCTCTATTCTTCCATTAATTGAGGCAGCTCGACCAGGATGTAAAGCAGGTATACAGGAATTATGCAACCTATACAATATAGTTGAGAAAGGGAAACTCATAATTCAGCACTGCGTTGAATGTAGCAAGCTCTACTTGGTAAGTTAATTCTTGTGTTTATTGGAAACTAAGAATATGATATCCTTCATTTATTACTGATTTGCTAATTATTATTATTTTACCATTTGATGATTGTGTGTATGTATTTGTGTTCAGGCTATTACTGGAGAGGCGATTGTATCTCGGTGTGAAAGGATCAGAGACTCACTTAGGCGGAGCTTGTTCCTGATTGAGAACATGGTCCCACCAGCACTAGCTAATCAGGTTAGTTCATTTTGTGATCTTTGTTGTTTTACTCTATCATGTCAGCCTCACAAACTCAAAGTCATTATACTGTTTATAAGTTAAATAACAATTTTTTTTTGCTTCCCTCATGTGCATGAATTGCTATATAGCTTTTCTTTTGGCCATTAAATAAAAGCAATACTGAAAGATATCTAGTATTCTTGGAATTTGATTTTGTCTTCTCCAAATAACTGAGTTTTCAAAGGTCTCCAGACCTACTTCTGTAAAGTAATATGATTTAACTTGAAATACTAGTAATTTATAGAAGCACCTGCAATAAGCAGCAAATTGATCAAAACATGCTTCTTATAACTTGCAGTTAGAGGATATATCACTTTTATCATGGAATTCTGTGTATTGCTATGATATCTTTCTTGCAACTACTTCTCATTTGCTTGATTGTTTATGAAGTTACTTTTTCTCACAGATTGTTGACGTCCATGATGATCTTGGGGACATAAAATTTGTTATTGATCCCACAGAAGAAGAGGCTGGCAAAACCATTTTAGAGATGCTTCGGCAATCTGATGTGACTGAAGAACTTGAACTTGAGACATTCCTGCAGGCAGCTTCAAACTTAAACCTGACATCTCCTAAATCTATGCTAATTGAACGAAGGGCTATCAAGAAACTGCTTGACAAGATTAGCGGTACTGATCCCAAAAAGGAGGGAGTTCTTAAGTTCCTTCTATACCTTGTTAAAAAGTATGGAAAAAACATCAAACCAGAAACTGGTGAGCGGAATGAAAACATGCAATCTGAAAGCCAGTCTTCGACTCCAAGCTCAAGTTTTGTTAGTGATATCAGCACTCCTGGAAAGTGGTACACACCCACAGACATCCAGAGGAATGAGGATCAGACTAGTATGTCAGGAGCAGCCACACCACCTGCAGAGTTCTGTTGCCCAATATCAACAAAGTTAATGCGTGATCCTGTCATAATAACATCTGGGCAGACTTATGAAAGAGAAAATATTGAGAGGTGGTTTAGGGAGGGATATGATACCTGTCCCAGGACACATATAAAGCTAGAAAATTTCGCGATGATTCCAAATACTTGCATGAGGGACCTCATTTTCAATTGGTGCAAAGAGCATGGTTTCATAATCTCAGATATTCTCCCTCCATCCAAAAATGCATACAGTTACTTGCCGGAGCAATTGCATGGTTACTCCATGTCAAGTCTGCACAATGTTTCAGTACCTCTAATTGCTGGAAAAGTCAGGGATTTTGTGATTGACCATAGCACTTCATCTGTTGCATTATCTGAGGCCAGTTATATGTCAGATTCATATCATGTGCGGGACATGGAGGAACCGAAAGATAGTTTTTCTCAGTTCTCTTGGAGTGCGGACTATCAAGAGTGTTTGTCTTTTCGCAACTTCAACCAGGACAAGTTCCTAAGGTTCTTTTACGAGCTGTCGAAGCTCCCATTGGAACTCCAAGACAGGTCCATTGGTGATTTGAAGATCATTCTCAATGAGGAAAATGAGGCTTCATGTGCTATGGTTTCCAATGGATTTGTAGAGGCATTCTTTGATTTCTTAATGAATGAAGATGGAAGCTACAGTATGCAAGCTCAGAAAGTTGGATTTCAGTTCTTTCGTGTTTTTCTTTCCAATAGCAGGTAACCACATTTCCTCTGACAAATGTGTTCCTTTCATCAGTCTTATATTGAAGATCATTTGCTCTCATAGCTCACAATCAGAATGAAGGTTTTTTAACAACATATTTCTTTGACGTACAGGACTAATATTCTACACATGAATGAAGAAGCATTCCGTCTATTTGCATCCTTTATTGATTCTGAGTTAAAAACCGAAGCTTTGCTGACACTTCACGAGCTGGTTCAACACCTGAGTTGTCGACAATCCCATTTGATGGCCTCTATTATCACTCCTTTATTGGAGTCTGAAGATGCCGAGGGTCTCGAGCTTTGCCTGAAGATTGTCTGCAATCTTTCATCTGATTCGGATGTAAAACCATACCTAATTTCACTGGGAATTGTCTCAAGATTGTCACCCATTCTTTCTGAAGGAACCTTTGCTGAGTGTTGCTTGGAGATTTTGCGGAACCTGTGTGATGTGGAAGAAGCCACAGTGCTTATTACAAAAACTGATCGATGCCTTGGTTCCGTTGCAGAATATCTGGACACTGGAAGCCCTAAAGAACGAGAGCATGCAGTGGTTATCCTTTTAGCAGTATGTTCCCATAGTTCTGAGGATTGTTTACTTGTAATGAAGGAAGGTGTAATCCCTGCCCTTGTGGACTTGTCAGTAAATGGAATTGATGAAGCAAAAGGTTGTTCAATGAAGCTACTTCATCTTCTCAGGGATCTGAGGCGAACCGACCAGTTGAACAACTCATGTTCACAAGAAGTGGTTGTCACAGATGTAGTGGAGGGTCCTCCTGACAGTTCAATTCACAAGCAGCCAATACCAAAGTCATCTCGTTTTTTCCAAAGAAAGTTGAACATTTTCTCAAAGCCCCGGTCACTTACGCTATTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005770