BGIOSGA005795
| Gene Name |
BGIOSGA005795 |
|---|---|
| Description |
Probable 4-coumarate--CoA ligase 2 |
| Definition |
Oryza sativa Indica Group BGIOSGA005795, complete gene. |
| LocusTag |
4CL2 |
| Ensembl Transcript ID |
BGIOSGA005795-TA |
| Ensembl Protein ID |
BGIOSGA005795-PA |
| Length |
3088 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:30535259..30538346 |
| Sequence Coding Region |
30537264..30538346,30536300..30536498,30535799..30535944,30535660..30535727,30535461..30535563 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome02:30535259..30538346 source=RiceIndica02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome02:30535259..30538346 source=RiceIndica02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGATCACGGTGGCGGCACCGGAGGCGCAGCCGCAGGTGGCGGCGGCGGTCGAGGAGGCGCCGCCGGAGGCGGTGACGGTGTTCCGGTCCAAGCTTCCGGACATCGACATCCCCAGCCACCTGCCCCTGCACGAGTACTGCTTCGCCAGGGCGGCCGAGCTCCCCGACGCGCCGTGCCTCATCGCGGCGGCCACGGGGAGGACGTACACGTTCGCCGAGACGCGCCTGCTGTGCCGCAGGGCCGCCGCGGCGCTGCACCGGCTGGGCGTCGGCCACGGCGACCGCGTCATGGTGCTGCTCCAGAACTGCGTGGAGTTCGCCGTGGCGTTCTTCGCCGCGTCGTTCCTCGGCGCGGTCACCACCGCCGCCAACCCGTTCTGCACGCCGCAGGAGATCCACAAGCAGTTCAAGGCCTCCGGCGCGAAGCTCATCCTCACCCAGTCCGTCTACGTCGACAAGCTCCGGCAGCACGAGGCGTTCCCAAGGATCGACGCCTGCACCGTCGGCGACGACACGCTCACCGTGATCACCATCGACGACGACGAGGCGACGCCGGAAGGCTGCCTGCCGTTCTGGGACCTGATCGCGGACGCCGACGAGGGGTCCGTCCCGGAGGTGGCCATCTCGCCGGACGACCCCGTGGCGCTGCCGTTCTCGTCGGGCACGACGGGCTTGCCCAAGGGCGTGGTGCTGACGCACAGGAGCGTCGTGTCGGGCGTGGCGCAGCAGGTGGACGGCGAGAACCCGAACCTGCACATGGGTGCCGGCGACGTGGCGCTGTGCGTGCTGCCGCTGTTCCACATCTTCTCGCTCAACTCCGTGCTGCTGTGCGCGGTGCGCGCCGGCGCGGCGGTGGCGCTGATGCCCAGGTTCGAGATGGGCGCCATGCTGGGGGCCATCGAGCGGTGGCGCGTGACGGTGGCGGCCGTCGTGCCGCCGCTCGTGCTCGCGCTCGCCAAGAACCCGTTCGTGGAGCGCCACGACCTCAGCTCCATCCGCATCGTGCTCTCCGGCGCCGCCCCGCTCGGCAAGGAGCTCGAGGACGCCCTCCGCGCCCGCCTGCCTCAGGCCATCTTCGGACAGGGATACGGGATGACGGAGGCGGGGCCGGTGCTGTCGATGTGCCCGGCGTTCGCCAAGGAGCCGACGCCGGCGAAGTCCGGGTCGTGCGGGACGGTGGTGCGGAACGCGGAGCTCAAGGTGGTCGACCCGGACACGGGCTTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATCCGCGGCCCACAGATCATGAAAGGTTACCTGAACGATCCCGAGGCGACCGCCGCGACGATCGACGTCGAGGGGTGGCTGCACACCGGCGACATCGGCTACGTCGACGACGACGACGAGGTCTTCATCGTCGACCGTGTCAAGGAGCTCATCAAATTCAAGGGGTTCCAGGTGCCGCCGGCCGAGCTGGAGTCGCTGCTCATCGCTCACCCGTCCATCGCTGACGCCGCCGTCGTCCCGCAAAAGGATGACGTCGCCGGCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACATCACGGAGGAGTCCATCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAACCAAGCTCGCGGCGTGCTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MITVAAPEAQPQVAAAVEEAPPEAVTVFRSKLPDIDIPSHLPLHEYCFARAAELPDAPCLIAAATGRTYTFAETRLLCRRAAAALHRLGVGHGDRVMVLLQNCVEFAVAFFAASFLGAVTTAANPFCTPQEIHKQFKASGAKLILTQSVYVDKLRQHEAFPRIDACTVGDDTLTVITIDDDEATPEGCLPFWDLIADADEGSVPEVAISPDDPVALPFSSGTTGLPKGVVLTHRSVVSGVAQQVDGENPNLHMGAGDVALCVLPLFHIFSLNSVLLCAVRAGAAVALMPRFEMGAMLGAIERWRVTVAAVVPPLVLALAKNPFVERHDLSSIRIVLSGAAPLGKELEDALRARLPQAIFGQGYGMTEAGPVLSMCPAFAKEPTPAKSGSCGTVVRNAELKVVDPDTGFSLGRNLPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQVPPAELESLLIAHPSIADAAVVPQKDDVAGEVPVAFVVRAADSDITEESIKEFISKQVVFYKRLHKVHFIHAIPKSASGKILRRELRTKLAAC</aaseq> |
| Gene Sequence |
<dnaseqindica>1..1083#1849..2047#2403..2548#2620..2687#2784..2886#2978..3088#ATGATCACGGTGGCGGCACCGGAGGCGCAGCCGCAGGTGGCGGCGGCGGTCGAGGAGGCGCCGCCGGAGGCGGTGACGGTGTTCCGGTCCAAGCTTCCGGACATCGACATCCCCAGCCACCTGCCCCTGCACGAGTACTGCTTCGCCAGGGCGGCCGAGCTCCCCGACGCGCCGTGCCTCATCGCGGCGGCCACGGGGAGGACGTACACGTTCGCCGAGACGCGCCTGCTGTGCCGCAGGGCCGCCGCGGCGCTGCACCGGCTGGGCGTCGGCCACGGCGACCGCGTCATGGTGCTGCTCCAGAACTGCGTGGAGTTCGCCGTGGCGTTCTTCGCCGCGTCGTTCCTCGGCGCGGTCACCACCGCCGCCAACCCGTTCTGCACGCCGCAGGAGATCCACAAGCAGTTCAAGGCCTCCGGCGCGAAGCTCATCCTCACCCAGTCCGTCTACGTCGACAAGCTCCGGCAGCACGAGGCGTTCCCAAGGATCGACGCCTGCACCGTCGGCGACGACACGCTCACCGTGATCACCATCGACGACGACGAGGCGACGCCGGAAGGCTGCCTGCCGTTCTGGGACCTGATCGCGGACGCCGACGAGGGGTCCGTCCCGGAGGTGGCCATCTCGCCGGACGACCCCGTGGCGCTGCCGTTCTCGTCGGGCACGACGGGCTTGCCCAAGGGCGTGGTGCTGACGCACAGGAGCGTCGTGTCGGGCGTGGCGCAGCAGGTGGACGGCGAGAACCCGAACCTGCACATGGGTGCCGGCGACGTGGCGCTGTGCGTGCTGCCGCTGTTCCACATCTTCTCGCTCAACTCCGTGCTGCTGTGCGCGGTGCGCGCCGGCGCGGCGGTGGCGCTGATGCCCAGGTTCGAGATGGGCGCCATGCTGGGGGCCATCGAGCGGTGGCGCGTGACGGTGGCGGCCGTCGTGCCGCCGCTCGTGCTCGCGCTCGCCAAGAACCCGTTCGTGGAGCGCCACGACCTCAGCTCCATCCGCATCGTGCTCTCCGGCGCCGCCCCGCTCGGCAAGGAGCTCGAGGACGCCCTCCGCGCCCGCCTGCCTCAGGCCATCTTCGGACAGGTCGGTATCGATCGGTCTCAAAATATTACTCCCTTCTTACCATTCAAAGTCAAAGTTTCCGTATCCAATTTTGATCCTCCGTTTTATTTGATATCTTTTATGATTAATTTTTTATTGTTATTAGATGATAGAACATGAAAAATACTTTATGTATAACTTATGTTTTTATTTTTTTCTTAAAAAAATTTAAATAATACAAACAATCAAAATTTAACACGGAAACTTATAGCTGCGCATAAATGGATGGAGGGAGTACTAACATAAAATCGAATGACGTAATATGTTACATCCAAATCTAGATTGACTCCGTTTCATCGTATTATAAGTTGTTTTTGTTTTTTTCCTTGTTAAACTTTTTATAGAAAAATTTCTAACACAAAACAAACATATTATCAAAATATATTCAATATTATATTTAATGAAATTAATTTGATGTTTTAGATGTTGTTAAATTTATCTACAAACTTAATTAAATTTAAATTTAACTGGGAAAAAAATCAAAGCGAAAACACGGAGAGAGCATATTTTGGGAAGGGACAATAAGTTATTACCATTAGTTTCTCCATCACGTGGCAAAACGTCGTAATAGTACGGAGACAACATCCGAGCCGTTCGCTGCACCTAACTCTCGTAGTAGTACCATGACATGGCCGCGCGTGCCGCGCGCGCGTCGCGATCAGGGCGGAAGAAATCACCATAATCTCGCGACCTTCTCACGGGGGAGTCAAGACGTGACGCGGGCTGATGCGATGCGATGTGATGCAGGGATACGGGATGACGGAGGCGGGGCCGGTGCTGTCGATGTGCCCGGCGTTCGCCAAGGAGCCGACGCCGGCGAAGTCCGGGTCGTGCGGGACGGTGGTGCGGAACGCGGAGCTCAAGGTGGTCGACCCGGACACGGGCTTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATCCGCGGCCCACAGATCATGAAAGGTTAGCACTTCCTCCGCTTGAGGTCGAAAGACGTTTTAACTATTTAGACTAAGTTTATATATAAATATAATAATATTTATAATACTAAATTAGTTTCATCAAATCAATAATTAAATATATTTTATAATAAATTTATTTTAGGTTAAAAATATTACTAATTTTTTTTAATAAACTTAGCCAAACTTAAACTAAAATCAAAACATTAATCTGATGAAACGGAGAGAGTATCTACCTACAGTAAAACGAACCGACAGACTATGTATCTACTGGACCACCCCCAGTAAAGTGTTAATAGCTCGCCGGCAAGCATGTGATGACAAGAGGTTGTCTCGGTAATAATTAATAACACGTGCAGGTTACCTGAACGATCCCGAGGCGACCGCCGCGACGATCGACGTCGAGGGGTGGCTGCACACCGGCGACATCGGCTACGTCGACGACGACGACGAGGTCTTCATCGTCGACCGTGTCAAGGAGCTCATCAAATTCAAGGGGTTCCAGGTAATTAACAGCAGGACACTTAGCATCAGTTTTCTGATAATTCGCACTGTAACTATTGTCTATTCATGCAGGTGCCGCCGGCCGAGCTGGAGTCGCTGCTCATCGCTCACCCGTCCATCGCTGACGCCGCCGTCGTCCCGTAAGACCTCCATTATTTCACCATCAACAGCGTAACACACACCACCAGAATTTACTCGTCGAGGTAAAAAAAAATAACTGCATGTTAAAATGTCAGGCAAAAGGATGACGTCGCCGGCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACATCACGGAGGAGTCCATCAAGGAATTCATATCCAAGCAGGTATTGATTGGGATGAGATTGACGACGCAACAGCAGCAAAATTGCTGGAGACCTCACGTACGAGAGCTTGTCGTTTCGCGTTTCTCTGCAGGTGGTGTTCTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAACCAAGCTCGCGGCGTGCTGA</dnaseqindica> |
| External Link(s) |
