BGIOSGA005797

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Revision as of 02:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005797| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005797, complete gene.| tag = B1053A0...")
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Gene Name

BGIOSGA005797

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005797, complete gene.

LocusTag

B1053A04.20-2

Ensembl Transcript ID

BGIOSGA005797-TA

Ensembl Protein ID

BGIOSGA005797-PA

Length

5389

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30458401..30463789

Sequence Coding Region

30463277..30463789,30463069..30463166,30461668..30461694,30459763..30460341,30459423..30459675
,30459125..30459307,30458401..30459021

Genome Context

<gbrowseImage1> name=IndicaChromosome02:30458401..30463789 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:30458401..30463789 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGAGGCAGCGGCGGACGAGCGCGGCCTCGCCGCCGCCGCCGCCGGGGAAGACGAGGAGGAGACGTCGCCGATCGAGGAGGTGCGGCTGACGGTGCCGGCCGGCGACGACACGGCGCTGCCGGTGTGGACGTTCCGGATGTGGAGCATCGGCCTCCTCTCCTGCGCGCTCTTGAGCTTCCTCAACCAGTTTTTCTCCTACCGCACCGAGCCGCTCATCGTGACGCAGATCACGGTGCAGGTGGCGTCGCTGCCGGTGGGCCACTTCCTGGCGCGCGTGCTGCCGCGCCGCGCGTTCCGCGCCCCCGCGCTGCTCGGCGGCGGCGAGTGGAGCCTCAACCCGGGCCCCTTCAACATGAAGGAGCACGTGCTCATCTCCATCTTCGCCAACGCCGGCTGCGCCTTCGGCAACGGCAACGCCTACGCCGTCATGATCGTCGACATCATCCGCGCCTTCTACAAGCGCTCCATCTCCTTCGTCGCCGCCTGGCTCCTCATCATCACCACCCAGGTGCTTGGGTACGGGTGGGCGGGGCTGATGCGCAAGTTCGTGGTGGAGCCGGCGCACATGTGGTGGCCGGGGACGCTCGTCCAGGTCTCGCTCTTCCGTGGCAACATTGTACCGGTAAGGCTCACGGCACTGCACGAGAAGGATGAGTTGCCCCATGGGTCACGGCAGATATCCCGCTCCAAGTTCTTCCTGGTGGCGCTCATCTGCAGCTTTGCTTGGTACGCCGTACCGGGTTACCTCTTCCCGACGCTGACATCCATCTCATGGGTGTGCTGGGTCTTCTCCAAGTCCGTCACGGCGCAACAGCTGGGCTCCGGCTTGAAGGGCTTGGGCGTTGGGGCCTTCTCGCTCGACTGGACAGCTATCTCTTCCTTCCTCTTCAGCCCGCTCATCTCGCCCTTCTTTGCCACCGCCAACATCTTCGTCGGCTTCGTGCTCTTCCTCTATGTGCTCGTTCCCATAGCATACTGGGGTTTCAACCTGTACAATGCCAAGACATTCCCCATCTTCTCCTCGCACCTATTCATGTCCAATGGCACGAGCTACGATATCACAGCCATCGTGAACGACAAGTTTGAGCTTGATATCGATGCTTACAATAAGCTTGGCAGAATCAACCTCAGTGTGTTCTTCGCGCTCGCTTATGGTCTAAGTTTTGCCACCATTGCCTCCACTGTCACCCACGTCGGCCTCTTCTATGGAAAGGAAATCTATCACCGTTTTCGAGCTTCGCAGAAGGAGAAGCCTGATATCCACACTAGGCTGATGAAGAAGTACGATGACATACCAGTGTGGTGGTTCTACTCACTGATGGCGCTTTCGATGACAGTGGCACTTATCCTCTGCACTGTCCTGAAGCATGAGGTCCAGCTTCCATGGTGGGGTCTACTATTTGCCTGTGGCATGGCCTTCATCTTCACCCTACCCATCAGCATCATCTCTGCGACAACCAACCAGACACCTGGTCTGAACGTCATCACGGAGTATGCCATTGGGTTGATAATCCCTGGTCATCCCATCGCCAACGTCTGTTTCAAGGTGTATGGCTACATGAGCATGTCTCAGGCTATTGCCTTCCTCTCAGACTTCAAACTTGGCCACTATATGAAGATTCCCCCAAAATCCATGTTCCTAGTTCAGTTTATCGGCACAATTGTGGCCGGCACGGTCAACCTTGGGGTGGCATGGTGGCTGCTCGGCTCCATCCATGACATTTGTCAGGATTCGCTCCCAGCTGACAGCCCATGGACATGCCCCAACGACCGAGTCTTCTTCGATGCATCGGTCATTTGGGGCCTCATTGGCCCAATCCGCATCTTTGGACCACATGGCAACTACAGTGCCCTCAACTGGTTCTTCCTCATCGGCGCAGCAGGCCCTGTTATCGTGTACATCTTCCACAAGATGTTCCCAAACAAGAAATGGATAACACTGATTAACTTACCAGTGCTCATCGGCGCGACAGCCTCAATGCCACCGGCGACGGCTGTGAATTACAACTCTTGGCTGCTCTTTGGCACCATCTTCAATTTCTTCGTGTTCCGGTACCGGAAGAAGTGGTGGGAGAGGTACAACTACATTCTCTCTGCCGCACTCGACGCTGGCGTGGCTTTCATGGCGGTGCTGCTATACTTCTCACTATCCATGGAGAACCGGAGCATCGACTGGTGGGGCACGGCAGGAGAACACTGCGCACTGGCCACATGTCCCACTGCGAAAGGGGTTGACTTGGGTCCAACAAGCGTTTGCCCTGTGTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MGEAAADERGLAAAAAGEDEEETSPIEEVRLTVPAGDDTALPVWTFRMWSIGLLSCALLSFLNQFFSYRTEPLIVTQITVQVASLPVGHFLARVLPRRAFRAPALLGGGEWSLNPGPFNMKEHVLISIFANAGCAFGNGNAYAVMIVDIIRAFYKRSISFVAAWLLIITTQVLGYGWAGLMRKFVVEPAHMWWPGTLVQVSLFRGNIVPVRLTALHEKDELPHGSRQISRSKFFLVALICSFAWYAVPGYLFPTLTSISWVCWVFSKSVTAQQLGSGLKGLGVGAFSLDWTAISSFLFSPLISPFFATANIFVGFVLFLYVLVPIAYWGFNLYNAKTFPIFSSHLFMSNGTSYDITAIVNDKFELDIDAYNKLGRINLSVFFALAYGLSFATIASTVTHVGLFYGKEIYHRFRASQKEKPDIHTRLMKKYDDIPVWWFYSLMALSMTVALILCTVLKHEVQLPWWGLLFACGMAFIFTLPISIISATTNQTPGLNVITEYAIGLIIPGHPIANVCFKVYGYMSMSQAIAFLSDFKLGHYMKIPPKSMFLVQFIGTIVAGTVNLGVAWWLLGSIHDICQDSLPADSPWTCPNDRVFFDASVIWGLIGPIRIFGPHGNYSALNWFFLIGAAGPVIVYIFHKMFPNKKWITLINLPVLIGATASMPPATAVNYNSWLLFGTIFNFFVFRYRKKWWERYNYILSAALDAGVAFMAVLLYFSLSMENRSIDWWGTAGEHCALATCPTAKGVDLGPTSVCPVF</aaseq>

Gene Sequence

<dnaseqindica>1..513#624..721#2096..2122#3449..4027#4115..4367#4483..4665#4769..5389#ATGGGTGAGGCAGCGGCGGACGAGCGCGGCCTCGCCGCCGCCGCCGCCGGGGAAGACGAGGAGGAGACGTCGCCGATCGAGGAGGTGCGGCTGACGGTGCCGGCCGGCGACGACACGGCGCTGCCGGTGTGGACGTTCCGGATGTGGAGCATCGGCCTCCTCTCCTGCGCGCTCTTGAGCTTCCTCAACCAGTTTTTCTCCTACCGCACCGAGCCGCTCATCGTGACGCAGATCACGGTGCAGGTGGCGTCGCTGCCGGTGGGCCACTTCCTGGCGCGCGTGCTGCCGCGCCGCGCGTTCCGCGCCCCCGCGCTGCTCGGCGGCGGCGAGTGGAGCCTCAACCCGGGCCCCTTCAACATGAAGGAGCACGTGCTCATCTCCATCTTCGCCAACGCCGGCTGCGCCTTCGGCAACGGCAACGCCTACGCCGTCATGATCGTCGACATCATCCGCGCCTTCTACAAGCGCTCCATCTCCTTCGTCGCCGCCTGGCTCCTCATCATCACCACCCAGGTAGGCATTAGGCAATATTGTCAAACCATTTGCAGCCTAATCCATTTCAGATTTGCAACATTTGATCAGAAATCTCATGTTCTTGCGATTAACCGAGCATGATGATTTAGGTGCTTGGGTACGGGTGGGCGGGGCTGATGCGCAAGTTCGTGGTGGAGCCGGCGCACATGTGGTGGCCGGGGACGCTCGTCCAGGTCTCGCTCTTCCGGTGAGTAGCTACTAGCTCGCTTCACCTTCACTGCTCCTGCTCGCGTTCTACTTCAGTTTCTTCTCCTCTCTTTGTTAATTCTTCTCAACAGAAACGGTAGTAGGTTTTACGCTACGTTCTTTTTGCCATCACAGTTACAGTCTGGGTTTTGGTTGGAATTCCGGAGGCCGGCGAACATAGCATTGCGCTCTTTTAAATAAGTTTTTACGTCATTTCTCTTTTTTTTTCTCTCGCCATGCTTTGATTGGTTTGTCCTAAGTCTCGCGTCGCGCATGGCTTGCCAGTTGCCACACCTATAGTAGTAGCACCGTACTACAGCTTTTACTTTTTTGTGATGTTTTTTTTCCCGTTAGACATCGATAAAGTCGATGGAGAAAGCCGTGACCTGACGAAAAAAATGGCAGCGATGGAACCAAAAACCCAGGTTCTTTGTTCTTCTCGTCGTTCTCGACCATTTTCAGAAGAAGCATGTACGTACACTATATAGATATACTAGTACAAAGTGTTGGCCCAGTTCAGATTGAGAATCTGATCTAACCCGGAATTAAAGAAACAAAAGTGGTGGCGATTAAATTGAGAGAGAAAGAGAGAGCATCTGGGGCATTGAGTACCTAGCCAGGCTGCCCAGGCAGTGGGCATTTTCAGTTAGATGGTCTCTTTTTCTCTCTTGTCATCGACACTGATGTGGGAGCCCCCACCATGAACGTGGGAGGGGAGGGGTACACACTGGATAGGTTGATGGATAAAGCAGATGATGATGGAATCCCCGCAATTATTGCGCTGCCAGATTATGAGTGATTGGAGAAAGATATACTCCTGATTCTCCAATGCAAATTGGATTCTTTATTTGGAGGGGTGTTCAGACTTGAGATTTCATAATTCTGTCTTTGCACGCTCCGATGACACGTTTTGTTTTAAAACATGCACTGACAGAAAAAAAAAAGACAAATGAAAACACACTGTTGCTTTTCCCAATCAGATTTGGTAGGAGTTATCTAGCCGACTGATGGTGGATTGGTGGTGCACGCTGCACGCATAGTTTAGAATAAGGAGGCCATCGATTTCGTTTAGACTCAGTGATTGCTTAGGAGATGGACTGATGATGGTGCACGCATGGTTTATAATAAGGAGTTAAGCCCGTTAAGGAGGGGATCGAGTTTGTTTAGACTCAGTGATTGCAGATCAGATAATGATATGCTCCCTGAATTAGACCAAACGCTGTAATTTTGACTTTAGAAAGAAGGGCTTCTTTTTACTCACTATGTGGTTACAGTCCACATGTCTATCCTCTGAGGAGTAACCTGTAACTCAACTGCCATCATTCACACCAAACGGTTTCTCTGAATCTAGCCGACCCATCCTTTGATTTTGCAGTGGCAACATTGTACCGGTAAGGCTCACGTAAGCTTGGCATTAATCATCTCTAGTGTCATCAGAGATTCCAAAATGTCCTACTCACTGACCAGTGAAATCCATACGCCATTTTAGTTGAATAATTCTGACGGTCTCCTAATCCTGCGCCTTGTTTTGCAGTATTCCAATTTGCCTCTCTTGCAAGACGGAGGTAGCAGTGAAGTTAGTACCTCTTCTGAAGGAGACACATTAGCTACAGACACAGTAGTTAAGCTATAGTACTAGAGATTAGGTATGTTACCATTACGTTTACGTCGCTCCGACCTTAAACTTATACAGTGTAATGTCAAGTTGTCACCCCATCTCGTCACGTCAACTGATCCCGTTCTTACCGGATTAATTTAGATTAATGATCAGGCTGGTACATCCGAAAACGAACAACAGTAGTTTTTTTTAGATGATGGAATAGAATAACGAACAACAGTAGTAGCAGGCAGCTTTCAGAAAACGTTGATTCTTTGGACTCATGCGATACTTCCACATTAATTCAGCGAGAGTCAAAGTCCAATGAACGAAGCCAAAATGGACAGGGCGATGCGTGGGTGAGATGGGTACGGTCGTTTTCTTCGTCAGCGCTAGACAGAAGAAAGGGCGTGGTTGGGCTCCAGTTTTCTGCAGGCGACTCCGGCGCCGACGCGCGCGATGTGAACGCGCGTGTGGCCGCGACGCCTAACTTGCACCGGCGCCTGCGCGGCGAGATTCAACGTGAGTCGAGACGACGAGACGGATTGGGAGACTTTCTGTTTGAAACATTGCGCGGGGGGGCGTATGGTGCGGTGTGCGTCGTGCAAGCGTGCAACCCAATTGCTGGTCCAAGGGCTCCATCCATGCACAAGTTGCCCGGAAAAGACGGGATTGCTGCACATGCTGCTTCGCAAGCCCTCGCGTTTCATCATGTGTGTGGTGAGTCATGGAGTTGGGAATGGAGTACTGGATGGGATGCATATCCTTTTCTTCTGGACGAGGAGACTGCGGGCGCGAGGACAAAGCCAATCAATCTGCTGCCTACTGCGATTTTATCTTTTGTTTCTGTGGCTGCATCTGCATACGACATGCCGTCTCGTCTGTATGCACGTAGAGGACCCAGCATCACATAATAGTAGTCTGCGTAATAATAACATTCAGAACAACGTTGGGAATAATAGTATACTCTTGTCAATGGTGATGGATGAATCATGCAGCTAGAACAGTAGTACTAGATAGAACACAACAGCTCTGTTGCATAAAGTACTTATAACTAGTACATATTGCCTAAATATTTGATATTTTTATGACGTCGTATCTAATCTTTACACATCTCAATGTTTGTCTAAGGGCACTGCACGAGAAGGATGAGTTGCCCCATGGGTCACGGCAGATATCCCGCTCCAAGTTCTTCCTGGTGGCGCTCATCTGCAGCTTTGCTTGGTACGCCGTACCGGGTTACCTCTTCCCGACGCTGACATCCATCTCATGGGTGTGCTGGGTCTTCTCCAAGTCCGTCACGGCGCAACAGCTGGGCTCCGGCTTGAAGGGCTTGGGCGTTGGGGCCTTCTCGCTCGACTGGACAGCTATCTCTTCCTTCCTCTTCAGCCCGCTCATCTCGCCCTTCTTTGCCACCGCCAACATCTTCGTCGGCTTCGTGCTCTTCCTCTATGTGCTCGTTCCCATAGCATACTGGGGTTTCAACCTGTACAATGCCAAGACATTCCCCATCTTCTCCTCGCACCTATTCATGTCCAATGGCACGAGCTACGATATCACAGCCATCGTGAACGACAAGTTTGAGCTTGATATCGATGCTTACAATAAGCTTGGCAGAATCAACCTCAGTGTGTTCTTCGCGCTCGCTTATGGTCTAAGTTTTGCCACCATTGCCTCCACTGTCACCCACGTCGGCCTCTTCTATGGAAAGTAAGATATTCTCTGATCAGTACATAAATACATGAAACAATCACACGGTACATCTTCTGTATCTGAACCGGACAAACAAATGTGCAGGGAAATCTATCACCGTTTTCGAGCTTCGCAGAAGGAGAAGCCTGATATCCACACTAGGCTGATGAAGAAGTACGATGACATACCAGTGTGGTGGTTCTACTCACTGATGGCGCTTTCGATGACAGTGGCACTTATCCTCTGCACTGTCCTGAAGCATGAGGTCCAGCTTCCATGGTGGGGTCTACTATTTGCCTGTGGCATGGCCTTCATCTTCACCCTACCCATCAGCATCATCTCTGCGACAACCAACCAGGCAAGCTACGTTAGAATTTGAGGCATTTCACTAGAACAGAACTGTCAGTGCACTCTACTGCATTTTAATAGCTTAAGTAACAAAATCTGAAAATGATTTAAAATGTCATCTACAGACACCTGGTCTGAACGTCATCACGGAGTATGCCATTGGGTTGATAATCCCTGGTCATCCCATCGCCAACGTCTGTTTCAAGGTGTATGGCTACATGAGCATGTCTCAGGCTATTGCCTTCCTCTCAGACTTCAAACTTGGCCACTATATGAAGATTCCCCCAAAATCCATGTTCCTAGTTCAGGTATAAACAGAAGTCCCAACTCACTCATAAGGATTTGTTGACAACCATGTTAGCATGCAAGACGACATATTTTACTAACCTTGAGGGTACTGTTTTTACTCAGTTTATCGGCACAATTGTGGCCGGCACGGTCAACCTTGGGGTGGCATGGTGGCTGCTCGGCTCCATCCATGACATTTGTCAGGATTCGCTCCCAGCTGACAGCCCATGGACATGCCCCAACGACCGAGTCTTCTTCGATGCATCGGTCATTTGGGGCCTCATTGGCCCAATCCGCATCTTTGGACCACATGGCAACTACAGTGCCCTCAACTGGTTCTTCCTCATCGGCGCAGCAGGCCCTGTTATCGTGTACATCTTCCACAAGATGTTCCCAAACAAGAAATGGATAACACTGATTAACTTACCAGTGCTCATCGGCGCGACAGCCTCAATGCCACCGGCGACGGCTGTGAATTACAACTCTTGGCTGCTCTTTGGCACCATCTTCAATTTCTTCGTGTTCCGGTACCGGAAGAAGTGGTGGGAGAGGTACAACTACATTCTCTCTGCCGCACTCGACGCTGGCGTGGCTTTCATGGCGGTGCTGCTATACTTCTCACTATCCATGGAGAACCGGAGCATCGACTGGTGGGGCACGGCAGGAGAACACTGCGCACTGGCCACATGTCCCACTGCGAAAGGGGTTGACTTGGGTCCAACAAGCGTTTGCCCTGTGTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005797