BGIOSGA005817

From RiceWiki
Revision as of 02:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005817| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005817, complete gene.| tag = OJ1717_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005817

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005817, complete gene.

LocusTag

OJ1717_A09.47

Ensembl Transcript ID

BGIOSGA005817-TA

Ensembl Protein ID

BGIOSGA005817-PA

Length

1347

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29976661..29978007

Sequence Coding Region

29977961..29978007,29977774..29977865,29977272..29977636,29976661..29977182

Genome Context

<gbrowseImage1> name=IndicaChromosome02:29976661..29978007 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:29976661..29978007 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTACAGGCCCAGTACCCTTCCAGTCTCCTCTTCCACGATAGAGGTGAGCCGGAGAGGACGAAGGAGATGGACCTGCCCAGGCCGCAGATGTTCGCCGGAGTCTCGCCGGAGGTGTACTTTCCCAGCGGAGGAGCGAGTGGGATTAATCGGAGGAATAAGCGCTCGAGGGAGGCCATTGCCATGGCGCCGCCGCCGGCCAAGGAGGAGTTGGTCAATCTGTTCACGCTCCAGCCGCAGCAGTCTACGTCGTTTGTCAACATGGCGCAGCTCCACAACAGGGTATCGGCGTCGCCGTCCCGCGCGCCGGCGGCACTCGTGTCCACTGGCCTTCGCCTGGCATTGGATGAGCAGCAGCAGCAGCAACAACAACAAGAGAGCAAACGCCTGAAAGCCTTGTGCTACTCGTCGTCGCCCATGCCGTTCGTCTCGTTCTCCGACGAGCTTGCCGGACAGATGAAGCGGCAAGATGAGGAGCTCGACCGATTCATCAAAGAGCAGGGCGAGCAGCTCAGGCGGGCGATGGCCGATCGGGTGCGGCGCCATAACAGGGCGCTGCTTGTCGCGGCAGAGCGATCCGCGGCGCGCCGGCTCAGGGAGAAGGCGTTGGAGGCGGAGCGCGAGGCGCGGCGCGGCGCGGAACTCGAGGAGCGGCTGGCGCGCCTCCGCAGCGAGGCGGCGGCGTGGCAGGCGAAGGCCCTCTCGGAGCAGGCCGCCGCCGTGTCCCTCCACGCGCAGCTCCAGCAGGCCGCGGCCGCGGCGCGGGCGTCCGGCGATGAGCTCCGTGGCGGCGAGGCGGGCCCGGCGGAGTCGTCCTCGTCGGCGTACGTGGACCCGCGCCGCAGCGGGTCTGACCGCGCCTGCCTCACCTGCCGCCTGAGGCCGGCCACCGTGGTGCTCCTCCCCTGCAGGCACCTCAGCCTCTGCGGCGATTGCTTCGCCGCCGGCGACGTGGACGTGGCCATGGCGTGCCCCGTCTGCCATTGCGTCCGGACAGGGGGCGTGGAGGCCATCCTCTGTTGA</cdnaseq>

Protein Sequence

<aaseq>MAVQAQYPSSLLFHDRGEPERTKEMDLPRPQMFAGVSPEVYFPSGGASGINRRNKRSREAIAMAPPPAKEELVNLFTLQPQQSTSFVNMAQLHNRVSASPSRAPAALVSTGLRLALDEQQQQQQQQESKRLKALCYSSSPMPFVSFSDELAGQMKRQDEELDRFIKEQGEQLRRAMADRVRRHNRALLVAAERSAARRLREKALEAEREARRGAELEERLARLRSEAAAWQAKALSEQAAAVSLHAQLQQAAAAARASGDELRGGEAGPAESSSSAYVDPRRSGSDRACLTCRLRPATVVLLPCRHLSLCGDCFAAGDVDVAMACPVCHCVRTGGVEAILC</aaseq>

Gene Sequence

<dnaseqindica>1..47#143..234#372..736#826..1347#ATGGCGGTACAGGCCCAGTACCCTTCCAGTCTCCTCTTCCACGATAGGTGCGGCTTGTCTCCTCTTCTTCGTTAGGGCGGCTACGTGTTTTAAAGGTTTGGCCTCCTTTGGGCTGATGGATTATTCGTCGTCTGGTTTACAGAGGTGAGCCGGAGAGGACGAAGGAGATGGACCTGCCCAGGCCGCAGATGTTCGCCGGAGTCTCGCCGGAGGTGTACTTTCCCAGCGGAGGAGGTGGGTGGTGGTGACTGACTGACTGATTGATAGATAGATAGCCTGATGTTGAGGGAGTTCAAGGTCGCGCCATGGCGCCGCCGCACTACGGTTCTTGGATTGTGACATGGGCGTATGTGGTTTTGGTTTCTTTGCAGCGAGTGGGATTAATCGGAGGAATAAGCGCTCGAGGGAGGCCATTGCCATGGCGCCGCCGCCGGCCAAGGAGGAGTTGGTCAATCTGTTCACGCTCCAGCCGCAGCAGTCTACGTCGTTTGTCAACATGGCGCAGCTCCACAACAGGGTATCGGCGTCGCCGTCCCGCGCGCCGGCGGCACTCGTGTCCACTGGCCTTCGCCTGGCATTGGATGAGCAGCAGCAGCAGCAACAACAACAAGAGAGCAAACGCCTGAAAGCCTTGTGCTACTCGTCGTCGCCCATGCCGTTCGTCTCGTTCTCCGACGAGCTTGCCGGACAGATGAAGCGGCAAGATGAGGAGCTCGACCGATTCATCAAAGAGCAGGTAATCGACGATTTTGCCCCCCACACGATCCGTTTGTTTCGGTGGTTCGTTTGTTCCGTGGCGTGATGTGCCGGCACGTTCTTGGACAGGGCGAGCAGCTCAGGCGGGCGATGGCCGATCGGGTGCGGCGCCATAACAGGGCGCTGCTTGTCGCGGCAGAGCGATCCGCGGCGCGCCGGCTCAGGGAGAAGGCGTTGGAGGCGGAGCGCGAGGCGCGGCGCGGCGCGGAACTCGAGGAGCGGCTGGCGCGCCTCCGCAGCGAGGCGGCGGCGTGGCAGGCGAAGGCCCTCTCGGAGCAGGCCGCCGCCGTGTCCCTCCACGCGCAGCTCCAGCAGGCCGCGGCCGCGGCGCGGGCGTCCGGCGATGAGCTCCGTGGCGGCGAGGCGGGCCCGGCGGAGTCGTCCTCGTCGGCGTACGTGGACCCGCGCCGCAGCGGGTCTGACCGCGCCTGCCTCACCTGCCGCCTGAGGCCGGCCACCGTGGTGCTCCTCCCCTGCAGGCACCTCAGCCTCTGCGGCGATTGCTTCGCCGCCGGCGACGTGGACGTGGCCATGGCGTGCCCCGTCTGCCATTGCGTCCGGACAGGGGGCGTGGAGGCCATCCTCTGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005817