BGIOSGA005824

From RiceWiki
Revision as of 02:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005824| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005824, complete gene.| tag = OsI_085...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005824

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005824, complete gene.

LocusTag

OsI_08508

Ensembl Transcript ID

BGIOSGA005824-TA

Ensembl Protein ID

BGIOSGA005824-PA

Length

3097

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29924644..29927740

Sequence Coding Region

29927429..29927740,29926459..29926824,29925972..29926301,29925566..29925616,29924644..29925075

Genome Context

<gbrowseImage1> name=IndicaChromosome02:29924644..29927740 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:29924644..29927740 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGGCCGTTGCCGAACCAGACCGTGGCACGGACGTCCGCCACCTCCCTCCGTTACTTCCCTGGGCACTCGAAGCCGTCGCTGCCGCTGTCCGCGCCGGCTCTCCGGAAAGCCGCGGCGGCGCTCCTGCTCGCGGCGGCCGTGGCGCTGCCCTGTGCCGTGCTGTACCGCGCCGCGGTGTTGGACGCGGTCCAACCGGTGCAGGTGGGATGGGATCGCGGGCCGTGGTGGGAGCGGGGCCAGCCGCCCCCTGCTGTTGTGGTCCCCGAGGAGGACGGCGACGTCGATCCCGCTGCGGCCGACGATCTGGACAGTGACGACCTCAAACTTGAGCAAGTTCTGCAGGAGGCCTCCATGGATAATAAGACCATTATATTGACAACACTGAATGCTGCATGGGCTTCTTCAGGCTCGGTCATTGATCTTTTTATCGACAGTTTTCGCCGTGGTGTTAGGACTAGCTCACTTTTGAGACATCTTGTGATAATAACATTTGATTGGAAGGCTTACAAAAGATGTATGAAGATCCACGCATACTGCTTTGCTCTTGCAACCGAGAATGTGGATTTTTCTCAAGAGAAGAGGTTTCTGACTGCTGGTTATCTGGACATGATGTGGAAAAGGCTGGATTTCTTGCGGCTAGTTCTTGAAAAAGGTTACAGCTTCATTTTCTCGGATGCAGACATCACGTGGTTCCGCAATCCTTTTCCTCATTTCTATCCTGATGGAGATTTTCAGATTGCATGTGATCACTATGTAGGCAATGCAACTGATTTGGGGAACATAGCAAACGGGGGATTTAACTATGTGAGGTCAAACAATCAAAGTATAGAATTCTACAAGTTTTGGTATTCTTCGCGACTGAGATATCCTGGCTATCATGATCAGGATGTATTTAATTTTATAAAGCATGATCCTTACATTACAGATATTGGACTGAAAATTAAGTTCCTAAGCACTACATACTTTGGTGGCATTTGTGAACCCAGCAGAGATTTAAACAAGAAAATGTCAATTTCTGAGCATAATTGTCAGAAAGAGAAAAATACTTTGAAGGAAAGTTTGGGTAGAAAGTGGATTCAGCCCATGGGCTTCCACTGGATTGTCCCCAAATCACATTCGTCTTCCTATGACATTGACAGCCACGGCACCACCACCACTTCGCTTGACGCCGCCGGTGGCTTGCCACCTTCCTCTCTGCCTCCCACACCCTTCTGTGTCACTACTCGTTGCAGCCGCTGGCAGGAGCATGGCGGCGAGATCACCACCGGCTCATCATCATCATCCTGCCGCCGCCGCCGGCGACCTCTGCCCAGCATGTGGGCCAGCTGCTCTGACTCGCTGTTCGTGCTCGGTGCGGCACCGCTGCTGGAGGGGTGCGTTGGCATGGGTTTCAACCTCAACCTTGGCCTGCCTGGTCTGGGCCACCATGTCACCAGCGGCGCTGCAGACGAGGTGGCTGGTAGCTGTCGGCCTCCATGGCCTTAG</cdnaseq>

Protein Sequence

<aaseq>MARPLPNQTVARTSATSLRYFPGHSKPSLPLSAPALRKAAAALLLAAAVALPCAVLYRAAVLDAVQPVQVGWDRGPWWERGQPPPAVVVPEEDGDVDPAAADDLDSDDLKLEQVLQEASMDNKTIILTTLNAAWASSGSVIDLFIDSFRRGVRTSSLLRHLVIITFDWKAYKRCMKIHAYCFALATENVDFSQEKRFLTAGYLDMMWKRLDFLRLVLEKGYSFIFSDADITWFRNPFPHFYPDGDFQIACDHYVGNATDLGNIANGGFNYVRSNNQSIEFYKFWYSSRLRYPGYHDQDVFNFIKHDPYITDIGLKIKFLSTTYFGGICEPSRDLNKKMSISEHNCQKEKNTLKESLGRKWIQPMGFHWIVPKSHSSSYDIDSHGTTTTSLDAAGGLPPSSLPPTPFCVTTRCSRWQEHGGEITTGSSSSSCRRRRRPLPSMWASCSDSLFVLGAAPLLEGCVGMGFNLNLGLPGLGHHVTSGAADEVAGSCRPPWP</aaseq>

Gene Sequence

<dnaseqindica>1..312#917..1282#1440..1769#2125..2175#2666..3097#ATGGCGAGGCCGTTGCCGAACCAGACCGTGGCACGGACGTCCGCCACCTCCCTCCGTTACTTCCCTGGGCACTCGAAGCCGTCGCTGCCGCTGTCCGCGCCGGCTCTCCGGAAAGCCGCGGCGGCGCTCCTGCTCGCGGCGGCCGTGGCGCTGCCCTGTGCCGTGCTGTACCGCGCCGCGGTGTTGGACGCGGTCCAACCGGTGCAGGTGGGATGGGATCGCGGGCCGTGGTGGGAGCGGGGCCAGCCGCCCCCTGCTGTTGTGGTCCCCGAGGAGGACGGCGACGTCGATCCCGCTGCGGCCGACGATCTGGTGCGCTTTGCTTCCACCTCCTCCTCCCCGTCGTTTCTGCTGTTTAATTTTGTCCCCCTGAGTTTTTCTGTAGCGGTTCTAGTTATCTGAGGTGCGAATTGCTGTGCTTAGCATATACATATATAGGTTTTCTGCGTGCCGTTGTTAGTGAATCGCGTGGTTTATACCTCACTTCTACTCATTTCGCTTTTGAGGTTATTTTTAGTCATCGATCCTGTTTGACACTCCATTAACTGATTCAATCGACTATGACTTACAGATACGCATTGCAGTAATGAACAATAATCAAATGACCGTCATTGTGATTTACGGGTCAAGATTCCTTATATTTGTTTCACGGGTCAAAATTTCATGCTGTTCGTCATATCAATTCTGCAATGAATGCTTATCATACATAGCATCCAATAATTTGTTCTCCCATTAAAATCTGAAAACTAATAGATTCGTGAACAATAAGCCATAGTATATTGCTGCTTTCCTTTGCGGATGCAATTTCTTCCAATTTCACTGCTGTCTGATATGTCATTGAATTCGAGAGATCATCAGATCAAGTAGAGCTAATAGACCTGCATTTTGATTATTGGCTTATTGCATTTTCTTTTAGGACAGTGACGACCTCAAACTTGAGCAAGTTCTGCAGGAGGCCTCCATGGATAATAAGACCATTATATTGACAACACTGAATGCTGCATGGGCTTCTTCAGGCTCGGTCATTGATCTTTTTATCGACAGTTTTCGCCGTGGTGTTAGGACTAGCTCACTTTTGAGACATCTTGTGATAATAACATTTGATTGGAAGGCTTACAAAAGATGTATGAAGATCCACGCATACTGCTTTGCTCTTGCAACCGAGAATGTGGATTTTTCTCAAGAGAAGAGGTTTCTGACTGCTGGTTATCTGGACATGATGTGGAAAAGGCTGGATTTCTTGCGGCTAGTTCTTGAAAAAGGTTACAGCTTCATTTTCTCGGTAAAGTCAATTGCATTTTGAGTGTGTCCTATCTATATTGAAAATCAGCTTTTATACGCACATAGGGCTGTATATTTTCCTGAAAAATTAGCAGATGTGAAGCTGAAATAGAGTTTCTTATTAGTCACACCTGACATATTTTTTATCTGCATTTCAGGATGCAGACATCACGTGGTTCCGCAATCCTTTTCCTCATTTCTATCCTGATGGAGATTTTCAGATTGCATGTGATCACTATGTAGGCAATGCAACTGATTTGGGGAACATAGCAAACGGGGGATTTAACTATGTGAGGTCAAACAATCAAAGTATAGAATTCTACAAGTTTTGGTATTCTTCGCGACTGAGATATCCTGGCTATCATGATCAGGATGTATTTAATTTTATAAAGCATGATCCTTACATTACAGATATTGGACTGAAAATTAAGTTCCTAAGCACTACATACTTTGGTGGCATTTGTGAACCCAGCAGAGATTTAAACAAGGTTTGCACTATGCATGCAAACTGTTGCATTGGATTACAGAGCAAACTTCATGATCTAAGAGTCATAATGGAAGACTGGAGGAATTATATGTCTATGCCACCAAGCTTAAAAAGATTTGGGGCATTGTCATGGGGGGTACCACAAAATTGCAGGTTTGATGCTACCTTGGAATTTGAGTTTCACATGCTTCTTTTCCCCCAAAATGTTGTGCGAGAAGTACAACTGGTATTCATGTCCTGATTTTTCTTTCTCCTGAATCCTGATGATGTGTCTGATAATTTGGTTTCTTATGCAGTCTTTCATTGCTTAACCAGTGAGACATGCTTTTGGGGGTGCAAACTGTATAAAACTGTAGAAAATGTCAATTTCTGAGCATAATTGTCAGAAAGAGAAAAATACTTTGAAGGTTGGTTTCTTGCATTTCTTATTGTTTCTGTTTTACAAACTTCAGTTATTGTAATATTATGTTGTCAGTTTGCCACTGCCTAACTGGAGCTTGTGCCCGAACACCAGTGTGAGTAAAGTCATACTCGGGAGCTTCTCTCTCTCTCAAAAAAAAGTCATACTCAGGAGCTCTTTTGCAAGTAGCAAACTAAACTAGATAGCTAGTCTGAATTGATGAGACACTGTCACCCACTGGAATAATGGCATTGTAATAGTGAAGTCACATGCATTTCTGTTATGTTTCAGGGAAAAAGGGGCTACTACATCATCAACTTTGCCAACTTTGATGCCTTCAGTTAGGCCTGCTCATGGATTGGATCCTAATGGATTTAATGGATTGGATTTCAGTGTGGGTTGGCTTTGGATGGGTTGAAATGGATTGATGCAGCTAATGGGCTGGGGTGGGTTGGATGGAGATGTAAAACGGTTTGGATTGGATTGGTTTTGGTTAGGAAAGTTTGGGTAGAAAGTGGATTCAGCCCATGGGCTTCCACTGGATTGTCCCCAAATCACATTCGTCTTCCTATGACATTGACAGCCACGGCACCACCACCACTTCGCTTGACGCCGCCGGTGGCTTGCCACCTTCCTCTCTGCCTCCCACACCCTTCTGTGTCACTACTCGTTGCAGCCGCTGGCAGGAGCATGGCGGCGAGATCACCACCGGCTCATCATCATCATCCTGCCGCCGCCGCCGGCGACCTCTGCCCAGCATGTGGGCCAGCTGCTCTGACTCGCTGTTCGTGCTCGGTGCGGCACCGCTGCTGGAGGGGTGCGTTGGCATGGGTTTCAACCTCAACCTTGGCCTGCCTGGTCTGGGCCACCATGTCACCAGCGGCGCTGCAGACGAGGTGGCTGGTAGCTGTCGGCCTCCATGGCCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005824