Os12g0528000

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Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0528000| Description = Conserved hypothetical protein| Version = NM_001073443.1 GI:115488847 GeneID:4352388| Length = 4319 bp| Definition ...")
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Gene Name

Os12g0528000

Description

Conserved hypothetical protein

Version

NM_001073443.1 GI:115488847 GeneID:4352388

Length

4319 bp

Definition

Oryza sativa Japonica Group Os12g0528000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21057522..21061840

Sequence Coding Region

21057642..21057871,21058269..21059160,21060237..21060372,21061070..21061092

Expression

GEO Profiles:Os12g0528000

Genome Context

<gbrowseImage1> name=NC_008405:21057522..21061840 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:21057522..21061840 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggccacggggagcggttcttgggtcgcgcaggcgtccgtgctcggctgcggcgggggcggaggaggggtggtggtggtgcggcggccgtcgtgggatggcggtgcggcggtcggtggtagggcgaaggggttcggggtggtgcggtgctgcgtgcaggagaagaagccgcgggtgaggaagaccaaggaggagaggcgggagatggtcgagtccttcgtcaacacttaccgggtttcaaatgatgggaaattcccttcagtcaatctcacgcataaggaagtcggagggtcatattacatagttcgtgaaatcgtgagagatatcatccaagagaacagggttctgggccctggcggcttgaatgccacggcactgagttttgaagactgccctgattctgtggagtcacctgttacgcatgaactgggccaagacagtgtcgagatattagatatgtctgatgacaaccaagctggcatggatactgtgacagacatgagcacccagcaactactggggtcatctaatctattggatgctggtattctgaatggtgcactccaaaatgggaacatagcagatatggcatgcttagagacaaacagcgagaaacaagatgaagttccatgtgcgcaatcagcagaaattgaccccagtagttctgaaaagctacctccttccttctctcatgcccctgattcagaaagtgaatttgagatggacagtcgggtggttgctcatgagacaaccagcagtctcactaatggagttatttcctcaggacccagtgctgttattacaaatgagtcgcttttacaagatcatgatgacacaactgataatgctgttgatgaagctgttctttgcttacagactaatggaagttctcaagcaaatgagaccattttgcaggaacatgagacacgacctgaaagtgtcatgagcaatgatgttcaaaccattgacagtcagtccaattctagagtggatactttcaactcaaatacaagtgaagacacaaccaagtctattgaagtgtctgaagtacagaggttgcatcctgatgaggaagaaaaggcagaaaatcttgtttctcatgcagaactggatacaaaggtgttctcacacgttgaaggcaagaatggcatggtggaggaagataacagtgaactcaagcaatctatatctatcataacaatggaagagcatgatagcaagcctgaacatggagacagcaccacaactgccatcagcagtgcatgtgttactacttaa</cdnaseq>

Protein Sequence

<aaseq>MQATGSGSWVAQASVLGCGGGGGGVVVVRRPSWDGGAAVGGRAK GFGVVRCCVQEKKPRVRKTKEERREMVESFVNTYRVSNDGKFPSVNLTHKEVGGSYYI VREIVRDIIQENRVLGPGGLNATALSFEDCPDSVESPVTHELGQDSVEILDMSDDNQA GMDTVTDMSTQQLLGSSNLLDAGILNGALQNGNIADMACLETNSEKQDEVPCAQSAEI DPSSSEKLPPSFSHAPDSESEFEMDSRVVAHETTSSLTNGVISSGPSAVITNESLLQD HDDTTDNAVDEAVLCLQTNGSSQANETILQEHETRPESVMSNDVQTIDSQSNSRVDTF NSNTSEDTTKSIEVSEVQRLHPDEEEKAENLVSHAELDTKVFSHVEGKNGMVEEDNSE LKQSISIITMEEHDSKPEHGDSTTTAISSACVTT</aaseq>

Gene Sequence

<dnaseqindica>121..350#748..1639#2716..2851#3549..3571#acgcgccgcccctccaaaacccccaatcttgtcgccatttcctcctctcccccagcctccatcgccacccttgccgcgcgccgccctcctcttggtggctggaggaggaggaggaggaggatgcaggccacggggagcggttcttgggtcgcgcaggcgtccgtgctcggctgcggcgggggcggaggaggggtggtggtggtgcggcggccgtcgtgggatggcggtgcggcggtcggtggtagggcgaaggggttcggggtggtgcggtgctgcgtgcaggagaagaagccgcgggtgaggaagaccaaggaggagaggcgggagatggtcgagtccttcgtcaacacgtactgccacccctcttcctcccgtcgataaatttaatttcgtttttgatgaaattatctgaacctttcctgcactgctatgccatttaattaccattgcttgtctcattgctactgatattctagaatgaaattgctattgttctttatcttctttacagtgagtaagtttagcctactgtttcagaattttatagcaaatttggacctagttatccagtcctagaagccgtgttgcgtttgtttgatttcgcggccagggtcattagttcgttatatgatagtagtcctgttttccctatcttgtcgtctgtaattaccgcattgtgcgcatactgttcttctccatgtaggcaatgagcaatctgattggtgttgctgttgtttcctttttcagttaccgggtttcaaatgatgggaaattcccttcagtcaatctcacgcataaggaagtcggagggtcatattacatagttcgtgaaatcgtgagagatatcatccaagagaacagggttctgggccctggcggcttgaatgccacggcactgagttttgaagactgccctgattctgtggagtcacctgttacgcatgaactgggccaagacagtgtcgagatattagatatgtctgatgacaaccaagctggcatggatactgtgacagacatgagcacccagcaactactggggtcatctaatctattggatgctggtattctgaatggtgcactccaaaatgggaacatagcagatatggcatgcttagagacaaacagcgagaaacaagatgaagttccatgtgcgcaatcagcagaaattgaccccagtagttctgaaaagctacctccttccttctctcatgcccctgattcagaaagtgaatttgagatggacagtcgggtggttgctcatgagacaaccagcagtctcactaatggagttatttcctcaggacccagtgctgttattacaaatgagtcgcttttacaagatcatgatgacacaactgataatgctgttgatgaagctgttctttgcttacagactaatggaagttctcaagcaaatgagaccattttgcaggaacatgagacacgacctgaaagtgtcatgagcaatgatgttcaaaccattgacagtcagtccaattctagagtggatactttcaactcaaatacaagtgaagacacaaccaagtctattgaagtgtctgaagtacagaggttgcatcctgatgaggaagaaaaggcagaaaatcttgtttctcatgcagaactggatacaaaggttggtgaagccattttcctgctaggattattattgtatctaataaataatgcactatgcatcattacctattagttgtcttgagcatctcaagaaaactctatcaataccatatggataatatttttgttgaaaaattatgttctgccttttttctgacttatccttttcattacacagttgctttgcatacactagacaaataccttctacatgttctgttctcttgagacaatacattaattggtgtgctatttttttaaacctgggattagatatgtgcgttccattccttgaggtggtagcttctagtccttaatcgttgatggtattaattgttttttgatttataatgtatggatgcatctatgacaagaatcagggattagaggctatgattttgacagattgtttatcacatgcaaatattcaaattatctaatttatatgataggaaatctttgttctctcaatttgtttgtctattagaatggcaaatcgttagcattaaatcccccttttgccctctacagtttgccaggagtagtacagtatccaaactaacttagaaatggcatatctttggatatgtatgtattcattcctaacttatactacaggttttctgggttatgcctgactatttttggtatatggtgaagtgatcaaaatttggcatgggcactaacttcggaaggattagaaaagttcttgttagtctttttaagctgaaacttggcagggaaatgttcaaattttatctgctaccccccttctatctttcacgtgggatttgtatttgtgtgacagttgagttgtagattggctagtcagcctttcactatccttttgcttatgttcaaattattttgtattagggccaaattttagtgagtccatctggggattcccaaactactgactgtacacctattattcgactttattatgaaatatgtctttatgatactcttttgtatgacatgtatatgtatgagattattgtagatctcctttgacagtaacataatttatgcatttaaaaatcaaactcattttattcttcttctacataggtgttctcacacgttgaaggcaagaatggcatggtggaggaagataacagtgaactcaagcaatctatatctatcataacaatggaagagcatgatagcaagcctgaacatggagacagcaccacaactgccatcagcaggcatgcactttgccttctaactttgcgttgcatgcttactgtttataattttcttcatgcgtcgcaaaacaccacagcatatttggtaagtcattgtttcctcatgtttcctccgttgttcatatatattaagctagatccatcccattacatcttttttaatgtattgggtgaatcaatggacaagatctgaactagtagtaatgatatggttcacaaggttacctctaaaacttcttttagggccaatccatcatagtgcctattctttgttgaggcaacagtgaaacaccagagaagctatgcatagccactgccaattttgaccaacgcgtgagtctgccaaggaaaccaacacttccaactatccctgataactaacccaatcaaccaaaccgcaagtgggatggtgaggaatatctgataggcaaaatgggaaaatgtgcataggaaaatcaagtgataattttctgtgaacaaaagaagtggttaaaatgagatacatttatgaatggaggaagtatcgaatatcatgctagtacagataattcatgcatgcatgattaaccctgacagcgtacttcgatttaggtgataggcttgaaacctctattgataccaatcagattatcttttttgtttacaaagaaatgccactttaccatatgtgaacaagttactatttttcttgacgcagtgcatgtgttactacttaatgatgttagcaacaggcaactgagtgcattatggaagtattactcaagatacgtttctgttgtctagttgcctatttattgatattctatttgctatataatatttattgatcatataacaatttgttacataaaccggttcttgtaccttgtcgatcatgtcctatttttctgtttggttatgaaaattttatttctcatgcgaatgtggttaactatgcgagatgttaacaatttaacagtgattcaataaaggacagatcacacactataatgtttttaacattgttattctttatggtccgcaggaaaactgggaaggtgcagccgaagaaagagaccaacctgttttggctaatcattagggcatttgttgtttccatgtccaagatgtgggcaaaatgagaggatgtgcaaaagacactttcatctggcactgcagcctgggatgccctctgcctactggcaaatgtgaagctccattttgacgcgatgcatatacatatttgttttctgtgccgcacgttaggttggttggtaggcttcaggagtttatttaggttctagcttgtaggagtagcatttggtgaactttctcagccttttcaactctaaaatctattagctgtaattgcactatttttgtagaaggggtgaggtatgtgcttctcttatatatgaaagtatgaaacagtagtatccacagattctcctctgaatgaggattaccggcctggtggccttgcgt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0528000, RefSeq:Os12g0528000