BGIOSGA005867

From RiceWiki
Revision as of 02:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005867| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005867, complete gene.| tag = P0684A0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005867

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005867, complete gene.

LocusTag

P0684A08.19

Ensembl Transcript ID

BGIOSGA005867-TA

Ensembl Protein ID

BGIOSGA005867-PA

Length

5541

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28960593..28966133

Sequence Coding Region

28966110..28966133,28963883..28963982,28963632..28963674,28961352..28961820,28960593..28960742

Genome Context

<gbrowseImage1> name=IndicaChromosome02:28960593..28966133 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:28960593..28966133 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGCTGGCTGCAACAGTGCAGGGTGCCATAGAGGAAGGAGGCGGTGGAGACACCGGCGGTGGCAAGGGCGACATCGGCGAAGAGTTCGCCTCCCTCCTCCTCCCATCCTATCCCACGGAAGCTCATGCTTTGGAAGTTGTTGTATGCGTCATTTGGGAGTTGCGATTTGGCCTTCCCATGGAATCTGATGAAGATGCTAAGAAGGGGTATGCTGATTTTGAGGAGAGGGTAAAGAGAACGATATATATCGATCACCTTTCTCCTCAAGTCACAAGCTCAGTAATTGAAGCAGCTATTTCCCAGTGTGCACGCGTTGTCAATGTGGACTTCATTGTTAATTACACAATCCCATATGATATTCCTTCTGCTGCATTGGTGGAACTAGATGATGAAATACAAGCTAAGGCTGCTATCGACTTGATGAATAATTTCCCTTTCATAATCGGTGGAAAGCCAAGGCCTGTAAGAGCTATCTATGCAAAGCATGAAATGTTTCAGGATCGGCCTCCTTGCCCTGGAATCAAGAAAGAGTTCCAGTGGGTGAAACAAGAAGATGGAATAGAGTATGAAGGAATGAACAAACTGCGGCTCCTTGCAAGAAGGCAGGAAACAGAAAATATGGCACTCATAAAGAATCTATTGGAAGAGGACAAGGACCTAGCAAAGCAGCAACAGGAGTTACTTGATGGAATTTACAAGAAGTACTGCATACTAGACAGTGACGTGATGAATGATATCAAGAACCTCTCTCGCCGTTATGGAGTCAACCTGGCCGGTGACTGA</cdnaseq>

Protein Sequence

<aaseq>MQLAATVQGAIEEGGGGDTGGGKGDIGEEFASLLLPSYPTEAHALEVVVCVIWELRFGLPMESDEDAKKGYADFEERVKRTIYIDHLSPQVTSSVIEAAISQCARVVNVDFIVNYTIPYDIPSAALVELDDEIQAKAAIDLMNNFPFIIGGKPRPVRAIYAKHEMFQDRPPCPGIKKEFQWVKQEDGIEYEGMNKLRLLARRQETENMALIKNLLEEDKDLAKQQQELLDGIYKKYCILDSDVMNDIKNLSRRYGVNLAGD</aaseq>

Gene Sequence

<dnaseqindica>1..24#2152..2251#2460..2502#4314..4782#5392..5541#ATGCAGCTGGCTGCAACAGTGCAGGTTTGTGCGAGAATGGATCGCAACAAGCTACTACAAACCAGCAGCGCTCTAATCCGTTAGGATTAGATCATGGTGGTGCGGAAATGCAATTGATCTGTGCGCATGTGCTGTAACCCAAGAAATCATACTGCTTCTGAATCAAGGTACATCGGTGTTGGAAAGATTTTCAGCAAATCATGATGTGTTTGCTCCTCGTTATGGAGGAGAGACTCTGCAAGTCTGCAGCTTGTTTCTTCAGTTTCTCTCTATAAAAGATAAACGAAAAGGTTTCTTCAGTCACAACCCAATGGGATTTTTGGAGGTCTAATTTTTCTTCGTGCAGTGGGCTCGAATAGTATAAGCCCAAATAGTAAAGCCCCAAGATGTTAAGAAATGGCTAATTCTGGGGAAAAAGTACACGGAAGGTTCCTCAACTTGTCAGCAAGATAAAAAATGTCCTCGAACCGCAAAACCAGATATACGGGGTCCCTTAACTATACCAAACCGGTCACCCGAGGTCCCAGGACAGTATTGACGTCGGATTTGTCCTATGTGGCGGCTGAGTCAGCGTGTGACCCACGTGGGTCCCACATGTCAGGATGCCACGTAGGACCATCTCTTTCCCCTCTTCTCTCCCTTCCTCTCTCTCTCTCTCACTTTGCTCCTCGTTTGGTGGCCGATGACAGCAATGCGGCGCGACTTGGTACGGCGCCGATGAGGATGGGGTTGAGCCCGGGGGCGAACCGAGCGTCGCGGCGTCGAGCTCCACCCTGCGTGCGACGGCGCCGAGAGAGGGAAAGAGAGCTTCAACCGAGCATCGTGGTGTCGAGCTCCCTGACAGAGGCCGACGGGGAGAAGTGGGAGAGGAGGAGGTCCGGCGGCCGGTGATGCCATCGAAGATGCTAGCCACCTCGAATCTTTCCTCTTCAAATCCAGGTAGGGAGAGAAGCCACCTCGAATTCAAATTATCCCCCAATTTTTTCCTCATTCTTTACGCTTCTTACATTTGCTCTTGAATCCTTAGAGTTGTCGATGAGGAAGTGAAGCCGATCTCACCGCCGCCGAGGAAGGAAGAGGAGGAGGAGGAGCCGATCTCGCCGCCGCAACCACTGAAGCGGGAGATCTGGCAGGAGAAGGCGAGTGCGTTCTCGTCGGTGGGCTCCTCCTCCTCGGGGAAGAGCGGCGGCGCCGAGAGCAGAGGCCGACGTTGTGGAGGCCACAGGAGACGGCGATGGCAGCGTCCGGCTGGAGATCGAGGAGATCGCAGCGGGGGATCGCCGTCACGAGACCAGGAAGCGGAAGAACCACCTCGGTGCGCGCGCGCCCATCGCCTCTCGAATTCCATCTCCCTCTTTCACCACTGCTCATCCTCGACGCGATGTCCATGCCCCCTGCAGGTGGTGGTGGTGGCAGCGACGACCACCACAATGGCGGAAGCGCCAAGCGCGTGGTGGTGCTCGGCGACGACAACGGCGCCGACGCCCCTCCCTTGCTCCTGCGTCGTCGCCGCCTTGTTCCCTCGTCGCCGCCTTGCTCTCCTTCCCACCCGTTGGCTGGCGGCGTTGGCCTGCCCAGAACCCCAGAGAGAAGAGTGAGAGAGATAGAGAGAGAGAGGAGAAAGGGAGAGAAGAGAGGAAAGAGAGAGTAGGCTGACCTGGACAGGCTGACACGTGAGGCCCACGTGAGTCCCACGGTGACTCAACCACCGATGACCGTGGTCAAAGCGCCACATATGATAAAACCGGTATCAGCCGAGGGACCTATTGCGACCAGTTTTGTATAGTTAAGGGACCCCGCATATCTGGTTTTGTGATTTGAGGATGTTTTTTATTTCGCTGACAAGTTGAGGGACCTTCGGTGTACTTTTTCCTAATTCTGGCCCCAAGTCGTACACGTTACCTGTGGCGGTATGCTTCTGTGGGCTTTTCTGCTTGGGCCAATCCTGAGCGTCTCTTACTCTTCTCACGAGAACCCAAACGACGCCGCATTCCCCTTTTCCTCCCTTCCCGGGAACCCCGGCCGGCGGCGACCGGCGACCTCCCCTCCGAGTCGGCGACTGGTGCCTCCTTTTCTCCCCTGTGCTCCTTCTCCCTTATCCGTTAGGTCTACAAGCACCTGATTTGGCAGCGTTGATCCCCATTGTTGTAGGGTGCCATAGAGGAAGGAGGCGGTGGAGACACCGGCGGTGGCAAGGGCGACATCGGCGAAGAGTTCGCCTCCCTCCTCCTCCCATCCTATCCCACGGAAGGTGTGAAACTCTATTCGCACATGTGTGGCAAATTTTGGTAGGTTGTGAAGTCAATGTAGTAGTGCTGCTTGAGTGACCCTGGTTGCCCACAAAACACGGAGTTTGGATTTCCTTTTTTTTTTCCCCTCTATCACCTTAATCCGATTGTATCATGTGATATGCATGACAGAAAGTCACATAATGGTGAATTAATCTGTCGTGTTAAAAGCTCATGCTTTGGAAGTTGTTGTATGCGTCATTTGGGAGTTGCGGTATGCTCTAAGTACTAAGTTTGCCTTGCCTTGAGGATCCGAACCGTAGAACTTGGGTGGTAGGGTGTACACCCACACCTCCACCAAGTGAGCTAGGGTGAGTTTTCCTTCCGAGAAGAAGAAATTGCGATGTTTTAGTTTTTGGCGCATGCTACCCTGATATAGGTCTTTTTTGACGGAAGAAGGTAGAACAGGCTCTACCTTATAGTCATTTCATTAAAAGAAATGAGGTTTACAGATTACATATTAGGTGCGGGAATTATCAGAGAGAAAAAAAGAGCAAAAAGCAGAACAGACCAAAACAGAAAAAAGGGAGAATTTACATAAATATGTACAATGAGCAATCTTCTATGAAAGCCGTGAGCACCAGGATTGAATTTTTTGTCTGTTTATTTCATTGGTCCTTAGGTTCCAGAGGTGCATGGTGTCTGAGATCTGTTGAATAATGTGTTGTAGACTGTCAAATTGTCTTTCGAACACCTGGTTGTTGCGTGCTTTCCATAGAGTATATGCGCAAGCAGCAAACCAAATTGGCTCAATTCCTTTCAAAGTTTGATTTCTGCTATAATTGCCTGGAGGAAGGTTGAGATAGAATCTGAGTTGTTGGCTAGCTGCAGTAAATTCAATTTTTCCCAAAGGCTATTGGCCTGCTTGCATCTTAAGATGATGTGGTCAGCTGTTTCTAGAGCAGGGCACAAAGAGCAGTGGGGTCTTCGTTCCAGTTTTTGTTGACCATATTGGCTTTGGTGTTTAATCTGTCTCTGAATGCCAGCCAGAGGAAAACCTTGCAATTTTTCGGGATGGTGTGGAGCCAAATATAATCTGCTGGAGTCCAAAGTGACCCATGGAAGGACATCATCCGATAGGCATTTGCTGTTGAGACTTTGGGTTCCGGGTATGAAAACTCTCTTGCGTTTGTGTTGTCTGGGTAGGGGTGGTGGTTTTGCAGTATTTGCAGCAGTTCATGCAGCTCTGACTCTGCTTGGTAGGATAGGTTTGGATGGAGCTGGATGTGCCAGGAATTGTGCCTGTATTGCGATTCAACCGTGCAATCCTTGTGTAGGGCAAAAGAGAATAAAACTGGGAAAGCGAACTCTATGCGCTGGGATAGCCACTTATCTTTCCAAAAGAGGGTTGTATTGCCGTTGCCAAGTTTTACCTGGGTCGAGTAGCTTAGAATCTGGAATTGCGACTGGATGAGTTTCCAAGTTGGTGTATCACTGGCTCTGGGGTTTAGCTGTATTGCGTTTTGCAGATATCTTTCTCTAAACCAGATAGCCATTGGATCATCTTCTGCTGAGAGTACCTTGTTTGCTAGTTTTAAGAGTAACGCTGTGTTATGTGTTCTTAAGTCCTTGATCTCTAATCCTCCTTGTTGTCCCTGATATAGGTCTGATACTCTGATGTAATATCATTCATGATTTGTGTCTATTGCCAAGGAGCACCACATGCTTGTGTACGTTGCCAGTTCACGGAGTTTCTAAATCCAACAATATCAGAAAAGAGTTGCATGCAGCCTCTTCATGAATAATTTACAAACTTATCTTCACCGCATCTAAGCAAATCTCTATTGAATAGAAGACACTGCAGCTTAATTGCTGAAAAGTTCTTTTTTCCAGCATGGCCCTTTCAAGTTCAGGATAGGACAAAATCTTGCATCTATTATATTGCTCAGTTTGACACCCTGTCAATAGAATCATCAATTTCTTCTGAGGTTTTTGCATGGGTAAACAGAAGTTGAAAATGAGCTTATTGTTTGCACTGAAACCTTGGCACTCTTAATAACGGTTTCCATTTACTGTTTACCACAGATTTGGCCTTCCCATGGAATCTGATGAAGATGCTAAGAAGGGGTATGCTGATTTTGAGGAGAGGGTAAAGAGAACGATATATATCGATCACCTTTCTCCTCAAGTCACAAGCTCAGTAATTGAAGCAGCTATTTCCCAGTGTGCACGCGTTGTCAATGTGGACTTCATTGTTAATTACACAATCCCATATGATATTCCTTCTGCTGCATTGGTGGAACTAGATGATGAAATACAAGCTAAGGCTGCTATCGACTTGATGAATAATTTCCCTTTCATAATCGGTGGAAAGCCAAGGCCTGTAAGAGCTATCTATGCAAAGCATGAAATGTTTCAGGATCGGCCTCCTTGCCCTGGAATCAAGAAAGAGTTCCAGTGGGTGAAACAAGAAGATGGAATAGAGTATGAAGGAATGAACAAACTGCGGCTCCTTGCAAGAAGGCAGGAAACAGAAAATATGGCACTCATAAAGGTAAGTTGGATGACTTTTGAGTTTTTTCGGATGAGTGACTTATGTATTGTGCTTTATGTCCACTACCATGAAACAGCAAACTTTTCTGCTTAACTCCCTATGAAACTGTTGGTAGAACAATAGCTCAGAATTCACTCAGAAGAATGCTCAAGGGAACTGGGGGCAGGCTCCTTGATAGCACATAGACAACTGGAACCTAGAAAATGTCAACCTGAATAGAGTTTTGCGCATATGAATATAATTATCTAATTATGGAGGATGTTTCTTTCTGGAGAATCAATCAATGCCTACATGTATTTTTGTAATGGTTGATCTGCCTTTATCATGACTAAGGACCAATTAGATCTTAGGGATGGGCATGGATTACTCCTTGAGTACACACCAAGTGACCCGCGTTCATCCTTACTAGAATTGTAAATATGCTTGAGGAACTTTCATAGCCATTCCAGATTGGTGTTGTCTAAGCATTGTGTTGCGCTAGTTGATAATTGAGGACAGTATTNTGGGGTCTTGATGCTGTTAAATTACATATATATAATGCGTTGACGATGCTTTGATCTTCAGATAGCATGTGAGAAAATATTTTCATTTGGCTGTTCCCTTCCCCAGAATCTATTGGAAGAGGACAAGGACCTAGCAAAGCAGCAACAGGAGTTACTTGATGGAATTTACAAGAAGTACTGCATACTAGACAGTGACGTGATGAATGATATCAAGAACCTCTCTCGCCGTTATGGAGTCAACCTGGCCGGTGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005867