BGIOSGA005910

From RiceWiki
Revision as of 02:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005910| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005910, complete gene.| tag = OsI_083...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005910

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005910, complete gene.

LocusTag

OsI_08331

Ensembl Transcript ID

BGIOSGA005910-TA

Ensembl Protein ID

BGIOSGA005910-PA

Length

5431

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28307548..28312978

Sequence Coding Region

28312883..28312978,28312705..28312764,28311928..28312086,28311614..28311781,28311413..28311505
,28311151..28311243,28310349..28310607,28310234..28310260,28310043..28310127
,28309484..28309633,28308760..28308861,28308301..28308687,28307764..28307830
,28307548..28307685

Genome Context

<gbrowseImage1> name=IndicaChromosome02:28307548..28312978 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:28307548..28312978 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGGCGGCGGCGAGGCGCTCTTCCTGGACGGCGTCGGGGAGGTCACGGTGGCCGTCGGCGACGACGGCCTGTCCTTCCAGCCCCTTCACCAGGATGGAGTCAGGAAATTCGTACCTTCCGGTCTTCGGGTTCTTGAATCGAAGAAACGGAAGGAAGTGAGTTCTTCATGTTGGTCATCTATCATAATGCAACCTAAGTTAGAGAGCAAGCTTAAGTTTTCAGATGTCTATGCTGTAGAGCTTCTTGAGGTGGGTCCTGTATGTGAACCTTGGAATGCAAGAGCTACCGTTCAAGGCAAGATAAATACTGAGATGAACCGATTTGTCATACACACGGTCACAAGACCAAGAAAAAGACCATCTCCATGGGTACCTTGTGAATATATTTTTGGTCATAAAGACCAGCAAACCTGCAAAACTTGGGTGGAGCATATAAAGACGTGCGTAAATAAGGAACAGGATAGGCCCAAGAGCCTCATGGTATTTGTCCATCCATTGTGTGGAAAAGGTAGAGGGTGTAAGAATTGGGAAACAGTAGCTCCATTATTTGAGCGGGCAAAAGTAAAAACGAAGGTGATAGTCACACAGCGAGCAGGACATGCATATGATACTTTAGCATCTTTATCAGATAAAGATCTCAAGAAATTTGATGGTGTTATTGCAGTGGGTGGTGATGGTTTATTTAATGAAATTTTGAATGGGCTACTAAGTACAAGGCACACAAATTCTTATCCTCCAACTCCAGAAGGGTTTGGATATTTCAGAAACAACATGAAGTGTCAAGAACATAGAAATAATGATCTAAGCAATAGTGAGCTCACAGGAGATGATGCAAATGCCATCTCTGGAAGTTCTAACACACCTGATGATCATGAGCCCCTTCTTTCAACCACACGATCTACAGGATTGGACATCTCGTCATCAGATTCTAGTGATGAACCATGCAATGGAGATCAGGTGCCTTTAGTCTCCTTCCCAAATAATTGGTTTAGGCTTGGAATAATTCCTTCTGGCTCAACGGATGCTATTGTTCTCAGTACAACTGGGGAGCGAGATCCTGTGACTTCTGCTCTGCTTATTATCCTCGGCAGAAGGATATCACTTGATATAGCTCAAGTTGTCAGATGGAAAAGTAGCCCATCAGCTGAGGTTTCACCAACTGTGCGCTATGCTGCTTCGTTTGCAGGATATGGATTTTATGGAGAAGTTATAAGGGAGAGTGAAAAGTACAGGTGGATGGGTCCCGCGAGATATGACTTCTCTGGAACAATGGTATTTTTGAAGCACAGATCTTATGAGGCAAAAGTGGCTTTTCTTGAAAATGGAAACACTCATTCACTTACAGCATCGGCAGAGAATAATGCAAATGGAGTCCAAACACTGCAATACCATCAAAATAGACATCGGAAAACCATCTGCCGAACAAATTGTTTAATATGCAAAGGAACTTTAACATCTGAACAGAATTCAGAAGATGAAAATCCAGACAGTTCCAGAACAGCTTGTGAGACCCCAAAATGGGTCTGGTCCAAGGGTCGTTTTCTCAGTGTTGGTGCAGCTGTCATTTCATGTCGTAACGAAAGAGCCCCTGATGGTCTAGTAGCTGACGCACACCTATCTGATGGTTTTCTTCATCTTCTGCTCATTAGAGATTGCCCTCTTCCCTTTTACTTATGGCATCTTACACAATTTACCAAGAAGGGCTCAGATCCTCTGAGCTTCAAGTTTGTCGAACATCATAAGACACAAGCATTTACTTTTATATCGTCACATGACGAAAGTGTCTGGAACTTGGACGGAGAACTTCTTCAGGCCTGTGAGGTATCTGTTCAAGCTTTCCGAGGCCTTGTCAACCTCTTTGCGTCAGGACCGGAGGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MEGGGEALFLDGVGEVTVAVGDDGLSFQPLHQDGVRKFVPSGLRVLESKKRKEVSSSCWSSIIMQPKLESKLKFSDVYAVELLEVGPVCEPWNARATVQGKINTEMNRFVIHTVTRPRKRPSPWVPCEYIFGHKDQQTCKTWVEHIKTCVNKEQDRPKSLMVFVHPLCGKGRGCKNWETVAPLFERAKVKTKVIVTQRAGHAYDTLASLSDKDLKKFDGVIAVGGDGLFNEILNGLLSTRHTNSYPPTPEGFGYFRNNMKCQEHRNNDLSNSELTGDDANAISGSSNTPDDHEPLLSTTRSTGLDISSSDSSDEPCNGDQVPLVSFPNNWFRLGIIPSGSTDAIVLSTTGERDPVTSALLIILGRRISLDIAQVVRWKSSPSAEVSPTVRYAASFAGYGFYGEVIRESEKYRWMGPARYDFSGTMVFLKHRSYEAKVAFLENGNTHSLTASAENNANGVQTLQYHQNRHRKTICRTNCLICKGTLTSEQNSEDENPDSSRTACETPKWVWSKGRFLSVGAAVISCRNERAPDGLVADAHLSDGFLHLLLIRDCPLPFYLWHLTQFTKKGSDPLSFKFVEHHKTQAFTFISSHDESVWNLDGELLQACEVSVQAFRGLVNLFASGPEV</aaseq>

Gene Sequence

<dnaseqindica>1..96#215..274#893..1051#1198..1365#1474..1566#1736..1828#2372..2630#2719..2745#2852..2936#3346..3495#4118..4219#4292..4678#5149..5215#5294..5431#ATGGAAGGCGGCGGCGAGGCGCTCTTCCTGGACGGCGTCGGGGAGGTCACGGTGGCCGTCGGCGACGACGGCCTGTCCTTCCAGCCCCTTCACCAGGTTTACGCACAGCCGCACCCGCCGATGCCCTTCTGCCCGTCTGCGCTCACCCCGAATCTAGTCTTTAGATCCTACAGATTTAACTGGGGTTTTGACAGGAGTCTTGGTTGAATTGTAGGATGGAGTCAGGAAATTCGTACCTTCCGGTCTTCGGGTTCTTGAATCGAAGAAACGGAAGGTAGATAGAGAGGCGTAGACGATGAATAATGCGCTGGTGTCCGAAATAGTGAAGCTACAACCTGTACTGTACCTATTAGAATTCTGAACATAGGCTAGTTGGTTCACTATTTATACCAACAATTCTCAGGAGATTCATGAAAATCAGTGGTTAATGAAAAGCTCAGGAGAGGATCGCTATCTTGGCCAACATGGCGATATTGAAGTTTCTGTTTGGAACATAAGTAGCCTGTGTTGATGACGGTGTATAGATGTGTGATTGCGTCTGTGACCAGCATAAGCATGCTTTTTTAAAAGGGATAATATTCTTACTCAAACTAGAAACAGGAACACTAGTAGTGTGTTTGTGAAGCTATCATTTCACAAAACACAGCTTGAACCTTGGTTGAAATATTCAATAAAGAGCTCCAGACTTCCAGCTCGTGTGGAAAGACATAGTTGGTGAATATGACATTTTTGACATGCATTTAGTTCCTATCAGCAAGGATAGTGCAATTTTACTATTCCGTCAGACTTACATTATCCATCTGCAAATCATACAAGTACTCATAGAAGTTATCAGTTTGCTTTTGCCATGCACCTGTGTGTTTTCTGCTCATTGTGCTTCTGTACATTGCAGGAAGTGAGTTCTTCATGTTGGTCATCTATCATAATGCAACCTAAGTTAGAGAGCAAGCTTAAGTTTTCAGATGTCTATGCTGTAGAGCTTCTTGAGGTGGGTCCTGTATGTGAACCTTGGAATGCAAGAGCTACCGTTCAAGGCAAGATAAATACTGAGGTATAACATCCCTTCTAGTTACTTTGCAGACTTAATTTTCTGTAATATGTGTCAAAACGTTCGTGCCATATTAAATAATGCATTATATAAGCTCTTCCAGATGACACCTTTTACGAATAATTGACAAAAAACTGTTGCTCATGCAGATGAACCGATTTGTCATACACACGGTCACAAGACCAAGAAAAAGACCATCTCCATGGGTACCTTGTGAATATATTTTTGGTCATAAAGACCAGCAAACCTGCAAAACTTGGGTGGAGCATATAAAGACGTGCGTAAATAAGGAACAGGATAGGCCCAAGAGCCTCATGGTAAATATGATGTGTTTTTCTGCTCCTTGACATAGCATTTCGACGAACATGTCAGTGCCGCTCAACGTTGGTCTTATATTCTTGCATCAACCAATTTTCATGTTGTAGGTATTTGTCCATCCATTGTGTGGAAAAGGTAGAGGGTGTAAGAATTGGGAAACAGTAGCTCCATTATTTGAGCGGGCAAAAGTAAAAACGAAGGTAAACTTTTGCCAGTGGAAGTATAAAAAATCTATAACAGTTAAAGATGAGAATATGATGTGTATGACTGATTTTCTTTTCTGATCTTGTGACATTACCATTATAAGTTTTTTGTTGAACAACCCTCAAAGCTCCAACTCCTGATCGCCTCATATGCACATTGCTTCAGGTGATAGTCACACAGCGAGCAGGACATGCATATGATACTTTAGCATCTTTATCAGATAAAGATCTCAAGAAATTTGATGGTGTTATTGCAGTGGTATGTGAACTTGAGTGATTTTTTTTTCTACTTATTCGTTCAAAATAATGTTCTCTGTTTTCCTGAATAATTTATAGTTATAGGGAAGTGCTATGATGCTTATGCTTACCCTTTTTTTATTAGAACACAATAAATGCTTGTCTATAATTGTTTGATATTAAGCATCACAATTACAAGATGAGTGCTAGGCCAGAGAACACGCTTAGTTATGATCCACAATCAGCTGCATCTGGCCACAAGAGCATGCTCATATTCTACTGCTTTATTATGTATTTTGAAAAACACTTCAAGCTTGTCAAAATATACCTCTTGGTTAAATTTCATGGAGAATTGGAGATTACTTAGTACATGTCCAAAAATTTTGTATGGTTATATAAACCTTGCATTGATTGCCGCTAGAGAAACAAACCTAACTTTCACTTTTCACTTAGAGAAAAAAAAAAACTCACATTCTCAATCCACTTTTCAACTTGTTCATAAATCATAAGCATATTGAAGTTCCTCCTCGTTTTACTACCCTGATCTCCAAACTGTACATTTTAGGGTGGTGATGGTTTATTTAATGAAATTTTGAATGGGCTACTAAGTACAAGGCACACAAATTCTTATCCTCCAACTCCAGAAGGGTTTGGATATTTCAGAAACAACATGAAGTGTCAAGAACATAGAAATAATGATCTAAGCAATAGTGAGCTCACAGGAGATGATGCAAATGCCATCTCTGGAAGTTCTAACACACCTGATGATCATGAGCCCCTTCTTTCAACCACACGATCTACAGGATTGGACATCTCGTCATCAGGTATGTCTTTGATTTTACAATTTACATCTACCTCATATTATACAGAGAAATTTCTCTTGTAAGTAATTTTCTTGTCTCTTATTTGTAGATTCTAGTGATGAACCATGCAATGGAGGTCAGTGTGAAATCCTAACTATTGCTTTATCTTAAAATTGTTACACTTTTAAGATTTACTGACTTACATAGAGTTCCTGTTTCATTTCCACTTTATGCTACTGCAGATCAGGTGCCTTTAGTCTCCTTCCCAAATAATTGGTTTAGGCTTGGAATAATTCCTTCTGGCTCAACGGATGCTATTGTTCTCAGGTAGTAATCAATTCTATATCTATTCTTACTGATCTGTATTACTAGGATTACAATGTTTTCTTAACATTGGAAATTCAAATCCCTTAAAAAACTGTAACTATGTTCCGTTGCATGCAAGCTGGTTTATGAACTTATGATCCTCTAATCATACCTGACAGTTTATGTGCAATAATGCCGAACATGCAATAACCCACAAACCTGCTAAAATAATATCAAGCTGATCCTTCAACACTACTATGCACCTTGGGAAGTTTTCTTCTATTAAGCTTTAAATCCATGAGCACATTCATTGTATTAACCATTTGCTGTCTTGTGATGACTAAAAATAAGCCCAATATTGTTGCATACAAATTATTGATCATCACTTTCAGTTCTTTTCTGGTTGTTGAAGCCCTGTTGATGTTTGCAGTACAACTGGGGAGCGAGATCCTGTGACTTCTGCTCTGCTTATTATCCTCGGCAGAAGGATATCACTTGATATAGCTCAAGTTGTCAGATGGAAAAGTAGCCCATCAGCTGAGGTTTCACCAACTGTGCGCTATGCTGCTTCGTTTGCAGGGTATGCTACTGTTTCTTAGACATGATATATAGCTAATACTACCACAAATTTGATTTCTGATTACCTATTTCTTACATGTGGCTGTGTCGTTGTGCAGTACCAGCATAGGCATCCTATGTCAACGTTAACATCAGTCCATAAAACGGCTTAAAGTTCTGGAGAAAACTTCAGAGCTTCAGTTGAAGTCACTTTCAAAAAGTTAACCCAAGCTAGATTGTTATGTTTTTAACCTAAATCTTTTAGGGAAACATATTATTTTCTTGTGTTCTTCCTAGCATCACAGGCAGTCATGGATTGCACTGAACATATACTACCTCTGTCCGTTTTTTAATAGACGACGCCGTTGACTTTTTGTCACGTGTTTGACCATTCGTCTTGTTCAAAAAAAAACTTACGTAATTATAATTTATTTTGTTGTGAGTTGTTTTATCACTCAAGGTACTTTAAACATGGTTTATATCTTATACATTTGCATAAAGTTTTTGAATAAAACGAATGCTCAAACATGTATTCAAAAGTCAACAGCGTCATCCATTAAAAAATGGAGTCTTTTGGATATGACCATCTGCGGATTCCTCTTTTGCATAACTGCTGAAACCCTATGGTTTAAATCTGATTACAGATATGGATTTTATGGAGAAGTTATAAGGGAGAGTGAAAAGTACAGGTGGATGGGTCCCGCGAGATATGACTTCTCTGGAACAATGGTATTTTTGAAGCACAGGTGATTAACAATGAATTTGTGCTGGTATCTACCTATTCAGTTTGAAATTAACAGTCTCTAGTTGTTTTTCAGATCTTATGAGGCAAAAGTGGCTTTTCTTGAAAATGGAAACACTCATTCACTTACAGCATCGGCAGAGAATAATGCAAATGGAGTCCAAACACTGCAATACCATCAAAATAGACATCGGAAAACCATCTGCCGAACAAATTGTTTAATATGCAAAGGAACTTTAACATCTGAACAGAATTCAGAAGATGAAAATCCAGACAGTTCCAGAACAGCTTGTGAGACCCCAAAATGGGTCTGGTCCAAGGGTCGTTTTCTCAGTGTTGGTGCAGCTGTCATTTCATGTCGTAACGAAAGAGCCCCTGATGGTCTAGTAGCTGACGCACACCTATCTGATGGTTTTCTTCATCTTCTGCTCATTAGAGATTGCCCTCTTCCCTTTTACTTATGGTGAGAAATCTGTTACAAGAGGTCCGGTGTGCGTATTATCCCAAGTTTAAAAAGTTTTCTTAATTTAGGAAGGGAGTAGGTCAATACATGGATATCCATTTACCCAAGCTAGCTGAACTAATAGTCAGATGAGTGCATTTTTAGTTGATTCAGTTGAACTAAAGTGGGTCAATGGGTACCTATATATTGACCCACCATCCCTATTTAGCTATTTTTTATAGACTGGTTGCGCTCGAGTTGGAACTCTGAACCTTTTCATAGTTGATGTATGTTTACTCACTGAAGTGAACATGGCCGCACAGGCATCACAGAAATGGGAATACAAAATAAAATAAGTCTAGTATATTTCCACTTTTATGTAGTTTTCACAAACTAAAGAACATGCTAAATTCACTCAGAAATTAGTTTCTAGATTTGGTCACTATCCCTGTTTGCAGAGTATGTTCTTATGAGTTCTGACTTATCTGCAGGCATCTTACACAATTTACCAAGAAGGGCTCAGATCCTCTGAGCTTCAAGTTTGTCGAACATCATAAGGTATCATTTTCTTTTCTTTTCTTTCTTCATTTTACCTTCATGTTATTATATCTGAGCATGATCTTCCGATTTCCGCAGACACAAGCATTTACTTTTATATCGTCACATGACGAAAGTGTCTGGAACTTGGACGGAGAACTTCTTCAGGCCTGTGAGGTATCTGTTCAAGCTTTCCGAGGCCTTGTCAACCTCTTTGCGTCAGGACCGGAGGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005910

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005910&oldid=59462"