BGIOSGA005913

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Revision as of 02:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005913| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005913, complete gene.| tag = P0519E0...")
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Gene Name

BGIOSGA005913

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005913, complete gene.

LocusTag

P0519E06.12-1

Ensembl Transcript ID

BGIOSGA005913-TA

Ensembl Protein ID

BGIOSGA005913-PA

Length

4056

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28279815..28283870

Sequence Coding Region

28283743..28283870,28283107..28283174,28282268..28282338,28281948..28282181,28281425..28281588
,28281287..28281342,28281143..28281195,28280933..28281047,28280043..28280140
,28279815..28279886

Genome Context

<gbrowseImage1> name=IndicaChromosome02:28279815..28283870 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:28279815..28283870 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGACCTGGGAGGAGCCTGGCATGAGGCGGCCGCGGCGGCGGAGGAGGAGGCACAGGCACCGGGCGGCGGCGTCGGGCCCGAGCCCGACCACCTGGTGGTCATGGTCCACGGGATCGTCGGGAGTGCAGCTGATTGGAAGTTTGGAGCTGAGCAATTTGAAAAGTTGCTGTCAGACAAAGTTATAGTTCATCGTAGCAATCGCAACATGTACAAGCTAACTTTAGATGGCGTTGATGTGATGGGTGAGCGGTTGGCACAAGAGATTGTTGAAGAAACCAACAAAAGACCACAGATCAGAAAGATCTCTTTTGTTGCACATTCTGTTGGAGGATTGGTTGCAAGATATGCTATTGGAAGACTCTATAGGCCACCTAAACAAACATCCCAAAGTTCTCAGAATCTGAACAACACTAATAAGGGTACTATACATGGGCTTGAGGCAGTGAACTTCATAACTGTTGCGTCACCGCATCTTGGTTCTAGAGGAAACAAACAGGTTCCTTTCCTTTTTGGATTTACTGCAATAGAAACTTTTGCCAGCTACATCATTCATTTGATATTCGGAAAAACTGGCAAGCATCTATTTCTTACGGACAATGATGATGGGAAGCCTCCATTGTTGCTACGCATGGTGGATGATTGGGGGGGCGTACAGTTCATGTCTGCTCTGAAAGTATTCAAACGAAGAGTTGCATACTCCAATGTTGGTCATGATCATATTGTTGGGTGGAGAACATCATCCATCAGGCGAAATTCTGAGCTACCGAAGTGGACTGATTCAGGAAGCAAGATTTACCCACATATTGTATATGAAGAACTATCCAAAGCAGAAACAATGAATCAATGTACTGATGTTGCCGATGTGGACAGCTGCATGTTAGAAGAACGGCTTTTAAGAGGTCTGAAGCTTGTGTCGTGGGAAAAGGTGGATGTCAGCTTCCACAACAGCAAAGTAAGATCTGCAGCACATAGTGTGATTCAGGTCAAAGATCCCGTTATGCATAGCGAAGGTGCCGATGTCATAAACCATATGATCGACCATTTCGTCCTATAG</cdnaseq>

Protein Sequence

<aaseq>MGDLGGAWHEAAAAAEEEAQAPGGGVGPEPDHLVVMVHGIVGSAADWKFGAEQFEKLLSDKVIVHRSNRNMYKLTLDGVDVMGERLAQEIVEETNKRPQIRKISFVAHSVGGLVARYAIGRLYRPPKQTSQSSQNLNNTNKGTIHGLEAVNFITVASPHLGSRGNKQVPFLFGFTAIETFASYIIHLIFGKTGKHLFLTDNDDGKPPLLLRMVDDWGGVQFMSALKVFKRRVAYSNVGHDHIVGWRTSSIRRNSELPKWTDSGSKIYPHIVYEELSKAETMNQCTDVADVDSCMLEERLLRGLKLVSWEKVDVSFHNSKVRSAAHSVIQVKDPVMHSEGADVINHMIDHFVL</aaseq>

Gene Sequence

<dnaseqindica>1..128#697..764#1533..1603#1690..1923#2283..2446#2529..2584#2676..2728#2824..2938#3731..3828#3985..4056#ATGGGTGACCTGGGAGGAGCCTGGCATGAGGCGGCCGCGGCGGCGGAGGAGGAGGCACAGGCACCGGGCGGCGGCGTCGGGCCCGAGCCCGACCACCTGGTGGTCATGGTCCACGGGATCGTCGGGAGGTAATGGATACTAAGCTCGTGGGGGGCTCGTGTGCTGATCCGCTTTTGGTTTGATGCCGTAATTTTTGGCTGCTTAATTGCTTCGGCCTTCGGCTCGGGGGCGCTCTCTGAATTCAAGTAATTATTTTTTGTATGGTTTATTCTCTGATGGGTTCAGTTGCGCTCTCTGAATTCAGTGTTCTCTGAATTCTCTTCAGCGAGGTATCGCTATAGCAAGCGTGAGCAGCGGGCTCGCGCGTTTTTTTGCTGGACAGTGGACAGAAAATATGGAGATTTGGGCACTTAGTTAACAAACTGAATTTGAGATATCCCTTAGATGCTATGGCATTCTTTCATATTGGGCAGGTCGGCGTTTCCAATCAAAGCACGCAAAATTAGATCCATACCAATCGCTTGAGAATCGAGAGTGCTTAACTACCTGGTTGCAGTATAGCACGATGCTTATGCACATTTCAGCCATATATTAGTGCATCACTGAGCCCCGTTGCTAACTGGTTTTTTTTACCCTTCTGTATATCGTTTTGGTTGTCTGTTCCATGCATTGATCTTTCTCTCTTCATCTGTGCAGTGCAGCTGATTGGAAGTTTGGAGCTGAGCAATTTGAAAAGTTGCTGTCAGACAAAGTTATAGTTCATCGTAAGCTTCTCCCTATTCGCGAGTGTGTATATCATTTTTCTGAATGGTGTTTGGTGAGCAATTGTACTGCCACTTTTCTATATATACTTCAGTAAGACCATTATGGCATCTTATCTAATAGCAATACCTGTTACAACTTACAAAGTGTGATACGATGGGAATGTGCCCAATGGACACCTCTCATTGGTGCCATCTTTTTTGTTTTGCAATTTTGGTGATCATAATGAAAAAAGAAAAGAATTTTACCTCATCTTCCATGTTTTTTGGGATCTCCTTGCTCAGAGGCTACTTGTAAGACTGCAAGAGGGAGCATGCCCCTCTACGCGGTTACAACAGACTCTCGGCTGCCTTGCACACCCATAATTCCTCACGGATCACCCAAACAATATCCTCTATTGTCCAATTCAAACAACCATTGAATATCCTAACTTTGCACTCTTTCCAAATCATTCATTGCAACAAGATCACCAAGGTGTGTTGCGCTTGTAGAAAATGTCCCTACCTGTGAGCAACAGTTACAAAGTTATGATTCATTAAGGGGATTGTTGCAAATCATTATTTTGCTTTCCATATGTGAAACACAAATTCAAATATAGTAGATAACTTTGTTATCCCAGTCAATGCACAATCATATGTGTCTTTGTATTTGCACTACTGCATTGGAGGCTGGAGTCATACAGCATATGTTCCATAATTAAGATGGATGTTTTCTTGCTTTGAACCATTTCATTATGGTTACCTTACTTCAGTGATATTTTAATTTTGTAGGTAGCAATCGCAACATGTACAAGCTAACTTTAGATGGCGTTGATGTGATGGGTGAGCGGTTGGCACAAGAGGTCAGTGATTTCATTGTGCATATTGCTTATTTGCTGAGTATGTATGTCTTTGTTTCCCAAATTCATGACAAAATTTAGAAAGGCAGATTGTTGAAGAAACCAACAAAAGACCACAGATCAGAAAGATCTCTTTTGTTGCACATTCTGTTGGAGGATTGGTTGCAAGATATGCTATTGGAAGACTCTATAGGCCACCTAAACAAACATCCCAAAGTTCTCAGAATCTGAACAACACTAATAAGGGTACTATACATGGGCTTGAGGCAGTGAACTTCATAACTGTTGCGTCACCGCATCTTGGTTCTAGAGGAAACAAACAGGTACTACTTAAACCTTGTTTTACTGTACTTAATTCAAGAATTGATAAGTTATTTAAAACTTTCGAGGTTGAACAATCACTTGCTTTTAGTGATATGAATATAGTATATTACCTTACTCTGAATTGCTATACTTGCACGAACATTCGTGCTCCAGGCTCCAGGACATGTACATTTTCTTCAAGTTAAGCACATGCTAGTCTGTACTCAGTACTGTTGCTAAGGTTTCTTTAATCAATATTGTGATGCCAAGATCAACCATGCAATCAGCAGAGAACTCTTCTTTTGTAGAGATACATATGGCTTTGGTTATATTCAGGTTGAAATATCATTATTAATTTGTTCTGAAATTCAATCCGCAGGTTCCTTTCCTTTTTGGATTTACTGCAATAGAAACTTTTGCCAGCTACATCATTCATTTGATATTCGGAAAAACTGGCAAGCATCTATTTCTTACGGACAATGATGATGGGAAGCCTCCATTGTTGCTACGCATGGTGGATGATTGGGGGGGCGTACAGTTCATGTATGTTTTCCCCCATCATTTGGATCTATATGCTTGGATCATGAATCATTTGACTGTTAAGTTTATTAACTTCTTGTTTTAGGTCTGCTCTGAAAGTATTCAAACGAAGAGTTGCATACTCCAATGTTGGTCATGATCGTATCCTTTTCTTTTACTACTAAAAGACTAAATATACATTTAGTACTAAGTATTGTTTAAAATATCATTCCATAACTTGATGTTGACTAAGATATTGTTGGGTGGAGAACATCATCCATCAGGCGAAATTCTGAGCTACCGAAGGTTTACCCCCATGGCTACTTTTTTGTGACTTTGTTAGTTTGGCCTGTATACTGAACCTTGAATTTTTCCCACATACGCGTTTCTTGCTATTTCAGTGGACTGATTCAGGAAGCAAGATTTACCCACATATTGTATATGAAGAACTATCCAAAGCAGAAACAATGAATCAATGTACTGATGTTGCCGATGTGGACAGCTGCATGTTAGAAGGTTTGTATTATTGTTTTGATTGATAATGGATCAACATGATTATATTCAAAATTTGGTAATATTTGTAATCCCATATTATCAATAACAGTATTTCTGATAAATATTCAGTGCTATAGATATAACTATTTTTCCATGGTTTATGTAATTCCATGTTTTATATTTTCCTAATTAGATTGTTGTTTTTACCTAGTGAAAGAAAAGAGTTTTTGGGATGCTACTTATTATGCATGTTTATATGACATATGGTGACCTCTTTCTTTAGTTATAGTTCTTTCTTTGGGAAAATGGAAATAAGCTATTTCTTCTAAGTTTGCTAAGGCTCTTGGGATAACCAGGACATGGCTGCATTGCTGAGTGGGTCTAGCGTGCGATCTCCCATACATGCCCCCCCCCCCCCCCCCCCCCCGACTATACAGAATGCACGTTGCTTGTGTTCTTGTGACTTAACAATGTCCATAACTCCATATGTATGGTTGCAAATGAGACCATGCTCAACGACAGTACTCTGATTGTATCTGTCTGTTTACTATGTTTTTTTTTCGTGAATGTGCAAAAACTTTTCCCGTCAATATATTAGAACATGCGTGTGGTGTTCCAAAAATCAAATGATGTCGTTGGACTGTCCTCATTTTCCGATAGGCTTTTAATATTTTCTGCGAATTGGAACAGTAATATGCACTACAGAAGTGTTCTGTCCAAGTGATCATATAAGCCATATTATGACCTGACCTGCTCTTATTTCCTATGCCATGTGTTATGTCCATATGAGCTAACTTCTTCTGAAATTTCCAGAACGGCTTTTAAGAGGTCTGAAGCTTGTGTCGTGGGAAAAGGTGGATGTCAGCTTCCACAACAGCAAAGTAAGATCTGCAGCACATAGTGTGATTCAGGTATCTCTTTGCCCGTCTAAGCCGTGTTCTTTTATATGCTGTGTACAAACAGAGTCGATATTATTTACTCGTAGTTTTCTTTTAACTTAGCAACCAGTTTCTGTTTGTTGACATAGCGCTGAGATTAACGCATGCTTATAAATGAAATTTGGACAGGTCAAAGATCCCGTTATGCATAGCGAAGGTGCCGATGTCATAAACCATATGATCGACCATTTCGTCCTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005913