BGIOSGA005917

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Revision as of 02:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005917| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005917, complete gene.| tag = OJ1003_...")
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Gene Name

BGIOSGA005917

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005917, complete gene.

LocusTag

OJ1003_B06.6

Ensembl Transcript ID

BGIOSGA005917-TA

Ensembl Protein ID

BGIOSGA005917-PA

Length

5037

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28214692..28219728

Sequence Coding Region

28219381..28219728,28218742..28218837,28217920..28218585,28216782..28216885,28216593..28216680
,28216369..28216504,28216216..28216271,28216086..28216142,28215860..28216003
,28215282..28215347,28214964..28215213,28214692..28214867

Genome Context

<gbrowseImage1> name=IndicaChromosome02:28214692..28219728 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:28214692..28219728 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTACCCAATTAACGGAACACGATCACCAGCCAGAACAAGAACCACCACATTCTGAAAACCATCTGAAACAGGCAGAGCCAAACAGCTTCCAGTTCGCTGAAAAGGAAACAGGCTATGCTGGTCTACAGAATTTCACAGGCCCCAAGGTGGATGTGGGTCAGACTTCAGGAGAGCAGCAGCATGTAAAACAGATGGTCGGTCAGCAAGCACCACCTGGTGCACAGGACGCAAGGAAGCGGGGATACCAACCGTCTATACCATTTAATATGTTGATTCCAATCCTACAGGCTCATCTTGACAGAGACAAGGATATGCAGCTTCAAACTGTGTGGGCAAAACTTAGGCGTAATGAAGTTCATAAAGATGATTTCTTGAGAGTTATCAGGAACATCGTTGGAGATCAAATGCTAAAGCAAGCAGCCCATAAAGTTTTTGCACAGATGCAAGCCCAGGCACAGAGAAGTGGCCAGGCAAATGCAAATCAGCAGGCTAATGCAAATCAGTATTCTTTACAATCCCAAGTATCTTCCAGCGGTTCAGCTCAATTACATGATCAGCAAGTTCACGTGTCCACCACACCTAATCAGGGCCAAAAAAACCAAGCATTGTCTTCATCCCAAACCTTTGTGCAATCTGGCACTCAGGTGCAGAGCAGTATGACTGCTTATGATAATTCCATCCAACGGCCAGATGCAAAGGGAATGCATGTTACGCCGAACCGACCTCCTGTTATGAACTCAGCAATTTCTGCACAAACAATGAACAAACAGCAGCAACCCACACAAGTCCAGCAAGCGTCACAGCAAATATATGGAACAACTAATCGCCCTGACCAGCCATACACTAGGCCAATCGGTGGTTCAACACCTCTTAGCTCACTGAGTTCAGAATCAGAAATAAGGCCTTCCTCGCATCCTGCAAAAATGGAGATTCTTCCTTCTCATCCAATGACACAACAAAATGCAGCTGCGCAGCAAATGCAACAGAACAAGGATGTGAAGACTAATGCTTCTAATCCAAGGAGTAATGCAAAGCAAGATTCGGGGACAGGTAAGGGTCGTGCAGTTGGCACTGGAGGTTCTTCAACGAAATCGCAAGGGAAGCAGGGCCCCCCTAACGTTTCCACACCTCCCGCTGCAAAGAGTAACAAGAAAACTGCTGGGCAGAAGAAGTCATTGGAAACATCAGGCTCTACACCACCCCCTCCTAGCAAAAAGCAGAAGACTTCTGGAACCTTCCAAGAACAAAGCTTCGATCAACTAAATGATGTCACGGCTGTTAGTGGTGTTAATCTTAGGGAAGAAGAAGAACAGCTACTCTCTGCCCCAAAGGAAGAGAGCTGGGCCTCAGAAGAAGCAAGGAAAATTGCACAGGAAGAAGATGGCAAGCTTTTTCTGCAGAAAGGCCCACTTCTGAAGAAACTAGCAGCAATCGTTCCTAAATGCAATTTGAAGAGCATTGGTGGTGATGTTGAGCATTGTTTATCAATGTGCGTGGAGGAGCGATTGCGAAGATTTATCAGTACTCTCATAAGAGTTTCAAAGCAGAGAATTGACACAGAAAAGTCTGGCCATCGACTAGTTATAACATCAGATGTTGGCCGGCAAATTTTGCGGATGAACCAGAAAGCTAAGGAAGAATGGGATAAAAAACAAGCAGAGGAAACAGACAAGAACAAGAAACAAAATGAGGTTGACGGCGGTGGCACTGTGGAATTAGACAAGGAAAAGGAGGAAACTCGTTCAAAGAATGCAAAGCCCAACAAAGAAGAAGATGACAAGATGAGAACAACAGCTGCAAATGTTGCCGCCCGACAGGCTGTTGGAGGAAGTGATATGCTGTCCAAATGGCAACTTATGGCTGAACAAGCTAGACAGAAACGCGAAGGCCTTGATCTGGCTGCTTCTTCACAGCGCGGGACAGCTTCCAGGTCGCATATGGCTGGGAAAGGTCCCACAGATCACCACGAAGCTTCGAAGAGGACCCATTCTGCAGCGTTTGGAACTGGAGGCATGAACAGGCAAGGCAGGGGTCCATTTGCAGCGTCTCATCCAAAAGGACCACAAAGAACTATTTCTATGAAGGATGTAATATGTGTACTCGAGAGGGAACCTCAGATGACAAAATCGCGGCTGATATATCGGCTCTATGAGCGGTTGCCTGGAGATTCCAGCAGAGATTAG</cdnaseq>

Protein Sequence

<aaseq>MSTQLTEHDHQPEQEPPHSENHLKQAEPNSFQFAEKETGYAGLQNFTGPKVDVGQTSGEQQHVKQMVGQQAPPGAQDARKRGYQPSIPFNMLIPILQAHLDRDKDMQLQTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFAQMQAQAQRSGQANANQQANANQYSLQSQVSSSGSAQLHDQQVHVSTTPNQGQKNQALSSSQTFVQSGTQVQSSMTAYDNSIQRPDAKGMHVTPNRPPVMNSAISAQTMNKQQQPTQVQQASQQIYGTTNRPDQPYTRPIGGSTPLSSLSSESEIRPSSHPAKMEILPSHPMTQQNAAAQQMQQNKDVKTNASNPRSNAKQDSGTGKGRAVGTGGSSTKSQGKQGPPNVSTPPAAKSNKKTAGQKKSLETSGSTPPPPSKKQKTSGTFQEQSFDQLNDVTAVSGVNLREEEEQLLSAPKEESWASEEARKIAQEEDGKLFLQKGPLLKKLAAIVPKCNLKSIGGDVEHCLSMCVEERLRRFISTLIRVSKQRIDTEKSGHRLVITSDVGRQILRMNQKAKEEWDKKQAEETDKNKKQNEVDGGGTVELDKEKEETRSKNAKPNKEEDDKMRTTAANVAARQAVGGSDMLSKWQLMAEQARQKREGLDLAASSQRGTASRSHMAGKGPTDHHEASKRTHSAAFGTGGMNRQGRGPFAASHPKGPQRTISMKDVICVLEREPQMTKSRLIYRLYERLPGDSSRD</aaseq>

Gene Sequence

<dnaseqindica>1..348#892..987#1144..1809#2844..2947#3049..3136#3225..3360#3458..3513#3587..3643#3726..3869#4382..4447#4516..4765#4862..5037#ATGTCTACCCAATTAACGGAACACGATCACCAGCCAGAACAAGAACCACCACATTCTGAAAACCATCTGAAACAGGCAGAGCCAAACAGCTTCCAGTTCGCTGAAAAGGAAACAGGCTATGCTGGTCTACAGAATTTCACAGGCCCCAAGGTGGATGTGGGTCAGACTTCAGGAGAGCAGCAGCATGTAAAACAGATGGTCGGTCAGCAAGCACCACCTGGTGCACAGGACGCAAGGAAGCGGGGATACCAACCGTCTATACCATTTAATATGTTGATTCCAATCCTACAGGCTCATCTTGACAGAGACAAGGATATGCAGCTTCAAACTGTGTGGGCAAAACTTAGGGTGCGCTTTTGTCTCACTCCTCTGTTGTTAGCTGCTGTTTTTCATCAATTTGATTGGCTAGGGAAACTACACAGCCTTGTTGAGGCGAAGTGGGGAGCAAAGTTAACCTGCTTCGCACATCTATTAATTTGTTCAAAGTTATATATCCTCTATGTTGTTAATATCGTTGTTAGACTTCTAAAATTTGTTGCTAAAATTAGGACTTAGGGCTTGTTTGGTTTGTGGCCGAACCCAACCAAGCCAAAAGAAAGACATCTATTTGGTTGTGGCCGAAAAATTGGCATTGCCAAATTATTTCGCTTAGTACACTACATAAATGCAACTTTGATAGTAAACCAAACAAAAGCCTAGCCAATTATTGCCATTTTTAATCCATTTGAATAAAAGAGGCGCCTGGGATCTTTTTTTTTCTTTTTTTTTTTTTGGGGGGGGGGGAGGGTGAGATAAATGAATGCTAGCAAAGATGCCTCATCATTTAAAATGGAGTTTGCACCATTTCCACTGAAATGAAACTAACTCAGCTGTACCATTCTATGTTTGTAGCGTAATGAAGTTCATAAAGATGATTTCTTGAGAGTTATCAGGAACATCGTTGGAGATCAAATGCTAAAGCAAGCAGCCCATAAAGTTTTTGCACAGGTGAACGGATTGTGTTAACTTCATTGCTGCCATTTGTTTCCCTGATAACTGTTTAATAAATATCAATCAAGTTTGATGAAAGTGAAGTCACTCTTAATTGTCATGTTGGACGAGAGATCACTGAGTAGGAAATATCTTTATTTAATTTGTTTTCAGATGCAAGCCCAGGCACAGAGAAGTGGCCAGGCAAATGCAAATCAGCAGGCTAATGCAAATCAGTATTCTTTACAATCCCAAGTATCTTCCAGCGGTTCAGCTCAATTACATGATCAGCAAGTTCACGTGTCCACCACACCTAATCAGGGCCAAAAAAACCAAGCATTGTCTTCATCCCAAACCTTTGTGCAATCTGGCACTCAGGTGCAGAGCAGTATGACTGCTTATGATAATTCCATCCAACGGCCAGATGCAAAGGGAATGCATGTTACGCCGAACCGACCTCCTGTTATGAACTCAGCAATTTCTGCACAAACAATGAACAAACAGCAGCAACCCACACAAGTCCAGCAAGCGTCACAGCAAATATATGGAACAACTAATCGCCCTGACCAGCCATACACTAGGCCAATCGGTGGTTCAACACCTCTTAGCTCACTGAGTTCAGAATCAGAAATAAGGCCTTCCTCGCATCCTGCAAAAATGGAGATTCTTCCTTCTCATCCAATGACACAACAAAATGCAGCTGCGCAGCAAATGCAACAGAACAAGGATGTGAAGACTAATGCTTCTAATCCAAGGAGTAATGCAAAGCAAGATTCGGGGACAGGTAAGGGTCGTGCAGTTGGCACTGGAGGTTCTTCAACGAAATCGCAAGGGAAGCAGGTAATTCAATTCCTGCATCATCTCACCTATCTGTCTTACGATATATTCAAATCAAATTTCCAGATTCATATGCAACCCAATTCCTCGATCCATCTAAATAGTCTGAATTACCAATAATTTTCATTTATGCAATTCCCCATGTTACAAAGGGATAGTTACATGCATAAAAAAATTCCTACAAGTTTATTTGCATTCCATCACAATTAGTTTTAGTTGGACTCAACACAATTAATTTTGATGAACGCCATAATAAACGGAAATGATCAATGTTAGTGAGATCTGATGCCATAATTCTTCAGGTAGAAGATTGATCAAACTTACCTAGGATAGCCTGCACTTGATTGTATCAATATCTTGGAGGAATGGAAATATGTAGTACCAGAACAGAGAACCTCCACTGTTTTGAAGTTTTAATTTTTGCTGTTACACTAAGTTGCATACAAATTCACTCAGTAATTGCCCTTTTTATTTGCTCATACGACCACTCTTATCATTTTGAGAATGTGGCCATCTGTAGTACATCCCGCTGTTACATGCAGGGTTATTTCATTGTTATCAAGGTGTTTACTAAGTAGTGGCCACTTGCCCCACCATCTGACACCTCACCTGGGTCCCTGTGTCTGGACAGGGCCTTAACACCTGACACAAAAAATAGGGGATGGGGGATTGGTTCATGGAGAGGGCTAAACATTAGTCACAACTTTTGGGATCTTTGTTTTTCTGCCATTTCTCTTTTCTCAATCTATTTCACTCCAGTTTCCTCTACTTTCTGCTGCATCCTGGTCAACCAGGTGATGGCTTGAGTGCTTTTTTTTTTTTGTGAAGGCCTTATTATCCTATGAAAATAATTTTGTGAAGGCCTTATTTCTGAGGAGTAACATGTGATTTAGTCAGAAAATGGCTGAAAGTGTGTTTGGTTGATTTCCAGTTGTATGGCTATGCATGCATACTTCAATAGGTTCACAGCAACCATGAAACTATTATATGCCTTCTCACATGTAGCTGTACGTATAATTATCTGACTGGACTGTCAGGGCCCCCCTAACGTTTCCACACCTCCCGCTGCAAAGAGTAACAAGAAAACTGCTGGGCAGAAGAAGTCATTGGAAACATCAGGCTCTACACCACCCCCTCCTAGGTTTTTGTAGTTCATTTCACCCCATATGCTCTTTCATTAGCAGATTGTTCAGTACATTCAATTTTTGGATAATCCTAAGGTGATTTCCTTTTTGTCACTAGCAAAAAGCAGAAGACTTCTGGAACCTTCCAAGAACAAAGCTTCGATCAACTAAATGATGTCACGGCTGTTAGTGGTGTTAATCTTAGGGTACGCATCTCCCTCTATGATTCTCATTTGATGTTTGTTTTATTTTTGTATATCCTCTTTATATTCCATCACTGTTTTACTTTAACAGGAAGAAGAAGAACAGCTACTCTCTGCCCCAAAGGAAGAGAGCTGGGCCTCAGAAGAAGCAAGGAAAATTGCACAGGAAGAAGATGGCAAGCTTTTTCTGCAGAAAGGCCCACTTCTGAAGAAACTAGCAGCAATCGGTTAGGACCTTGGAATTTCATATTGACACTGTAAAACAATATTACATGGCAATATATACTATCGAAGCAATACTAACTGATGAAACATTTTTCACAGTTCCTAAATGCAATTTGAAGAGCATTGGTGGTGATGTTGAGCATTGTTTATCAATGGTGAGCTATTCATATGATTGTCCTTAAGAATTTTTTCAGAGTAATGCAGTATATCTAACATAAATGCCTTCAGTGCGTGGAGGAGCGATTGCGAAGATTTATCAGTACTCTCATAAGAGTTTCAAAGCAGGTTATTTTACACAACATTCAATTACTAAATTTATGGTATTGTTGTTATTTTGATGTACTAACCATGATTTTCTTATTGCTAGAGAATTGACACAGAAAAGTCTGGCCATCGACTAGTTATAACATCAGATGTTGGCCGGCAAATTTTGCGGATGAACCAGAAAGCTAAGGAAGAATGGGATAAAAAACAAGCAGAGGAAACAGACAAGAACAAGAAACAAAATGAGGTGTTCCATAATATCTATGTTATTTGCTTGTGTACAATTTTGCATGACATGCTTGTTCCGTTGAACTATCATGTTATTACTATGGCACATCATCTTCAGTTATTTATCACTACCTTTATGCTGTCCTAAGTCCTAAATTATTATTTGTTGTTCTTTTATCCATTTTTATACTGAAATATCTAAACACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACATGCATGCCTACCCCGCACACATCCCACACTCTCCTGTACAACTTATCCCAAAGGAAAACTGAACGATTTAATTAATATATTTCTATTTTCAATTTTGACACGAAACAGTTTATAAGCAGCTTCACATGAAAAGGGACTGTAGCAGATTTCTTTGTCTTCTCACTGTTGAAGATCATACATTTTTTATGGTTACGAAAGGTCCATCAAGTTGCGATGTTGCAGTTAGTCATTCTAATTAACCATATCCTTACACACAGGTTGACGGCGGTGGCACTGTGGAATTAGACAAGGAAAAGGAGGAAACTCGTTCAAAGAATGCAAAGGTAACTTTACTAATGTGATATTTAGGTTTGGTGGCAGCCCTTGTTTTCCTAATATGCTTGACCTGTAGCCCAACAAAGAAGAAGATGACAAGATGAGAACAACAGCTGCAAATGTTGCCGCCCGACAGGCTGTTGGAGGAAGTGATATGCTGTCCAAATGGCAACTTATGGCTGAACAAGCTAGACAGAAACGCGAAGGCCTTGATCTGGCTGCTTCTTCACAGCGCGGGACAGCTTCCAGGTCGCATATGGCTGGGAAAGGTCCCACAGATCACCACGAAGCTTCGAAGAGGACCCATTCTGCAGCGTTTGGAACTGGTAAATCAGCAACCTTGCATTGATTTATTTTCCGCCCTTTCATATTATGCTAGAAAATGCTGCAACTTCAGTATCCATGTCATATTGCTATTGCAGGAGGCATGAACAGGCAAGGCAGGGGTCCATTTGCAGCGTCTCATCCAAAAGGACCACAAAGAACTATTTCTATGAAGGATGTAATATGTGTACTCGAGAGGGAACCTCAGATGACAAAATCGCGGCTGATATATCGGCTCTATGAGCGGTTGCCTGGAGATTCCAGCAGAGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005917

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005917&oldid=59469"