BGIOSGA005933

From RiceWiki
Revision as of 02:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005933| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005933, complete gene.| tag = P0048B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005933

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005933, complete gene.

LocusTag

P0048B08.22

Ensembl Transcript ID

BGIOSGA005933-TA

Ensembl Protein ID

BGIOSGA005933-PA

Length

4337

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27977882..27982218

Sequence Coding Region

27981757..27982218,27981082..27981210,27980287..27980418,27979800..27979942,27979607..27979704
,27979416..27979510,27978697..27978750,27977882..27978109

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27977882..27982218 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27977882..27982218 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGCCACCCACGCCATCATCCCCACTGGTCGCCTCCACCCGCCGCTTCGTCGCCCCTCGCCTCCGCTCCCTCCTCCCGGCCGCCGCCGTCTCCATGTCCAGCACCTCCTCCTCCTCCATCTCGGCCCCCTCCAACGGCCGCCCCGTCTCAGGCGGCGCCGGGGAGCAGCGGCCGCCGCCGAGTCCCCTCCTCCCGCAAGCGAGCCTCGAGGTCGCCGGGGCGCGCTGCGGCCTCCTCGCCGGGTTCGACAGCCTCCGCCGGCCGTACCGAGCCTTCCCCATCGTCGCGTCGAACCGGCACGTCGAGACCATCTTCGCCGCCTTCGCGCGGTCGCTCCCGGCCGTCGCGCTCCGCCGCGAGTGCCTCCGCACGCCCGACGATGGCGCCGTCGCGCTCGACTGGGTCTCCGGCGACGACCGTGCGCTTCCGCGGGACGCGCCGGTGCTCATACTCCTGCCTGGTCTAACAGGGGGAAGTGATGATACATATGTAAGGCATATGCTGTTAAGAGCTAGAAACAAAGGATGGCGCGTGGTGGTGTTTAACAGCCGTGGATGTGCAGGCAGTCCAGTGACTACAGCCAAGTTCTATTCGGCATCATTTACTGGAGATCTCCGGCAAGTAGTTGATCATGTTTTAGGACGTTTTCCTCAATCTAACGTTTATGCTGTTGGCTGGTCTCTTGGAGCAAACATTCTTGTGCGCTACCTTGGAGAGGAAACTGATAAATGTGTTCTTTCTGGAGCTGTGTCTTTGTGCAATCCATTCGATTTGGTAATTGCAGATGAAGATTTCCACAAAGGATTTAACAATGTCTATGACAGAGCACTTGCTAAGGCTCTGAGGAATATATTTAAGAAGCATGCACTTCTTTTTGAAGGATTGGAAGGTGAATATAATATACCAAAGGCAGCGAATGCAAGATCAGTTAGAGACTTTGATGAAGGGCTAACCCGAGTTTCATTTGGCTTCAAGTCTGTGGATGATTATTACTCCAACTCAAGCAGCTCAGATTCCATAAAAAATGTTTCCATACCCTTATTGTGCATACAGGCGGATAATGACCCAATTGCACCATCTAGGGGAATTCCCAGAGAAGATATCAAGGCGAACCCGAACTGCCTACTGATAGTAACACCACAGGGTGGTCACCTTGGATGGGTGGCAGGTGAAGATGCTCCATTTGGATGCCCTTGGACTGACCCAATTATAATGGAGTTTTTAGAATATGTTCATAACGAAAAGAACTCTAGTACCAAGGGTAGCATCTCATATGAGCAGCAGAGTGTTACACAAACGTCAGCCCCAGATGTCTCTGTGCATGTGCAGCGATAG</cdnaseq>

Protein Sequence

<aaseq>MAAPPTPSSPLVASTRRFVAPRLRSLLPAAAVSMSSTSSSSISAPSNGRPVSGGAGEQRPPPSPLLPQASLEVAGARCGLLAGFDSLRRPYRAFPIVASNRHVETIFAAFARSLPAVALRRECLRTPDDGAVALDWVSGDDRALPRDAPVLILLPGLTGGSDDTYVRHMLLRARNKGWRVVVFNSRGCAGSPVTTAKFYSASFTGDLRQVVDHVLGRFPQSNVYAVGWSLGANILVRYLGEETDKCVLSGAVSLCNPFDLVIADEDFHKGFNNVYDRALAKALRNIFKKHALLFEGLEGEYNIPKAANARSVRDFDEGLTRVSFGFKSVDDYYSNSSSSDSIKNVSIPLLCIQADNDPIAPSRGIPREDIKANPNCLLIVTPQGGHLGWVAGEDAPFGCPWTDPIIMEFLEYVHNEKNSSTKGSISYEQQSVTQTSAPDVSVHVQR</aaseq>

Gene Sequence

<dnaseqindica>1..462#1009..1137#1801..1932#2277..2419#2515..2612#2709..2803#3469..3522#4110..4337#ATGGCCGCGCCACCCACGCCATCATCCCCACTGGTCGCCTCCACCCGCCGCTTCGTCGCCCCTCGCCTCCGCTCCCTCCTCCCGGCCGCCGCCGTCTCCATGTCCAGCACCTCCTCCTCCTCCATCTCGGCCCCCTCCAACGGCCGCCCCGTCTCAGGCGGCGCCGGGGAGCAGCGGCCGCCGCCGAGTCCCCTCCTCCCGCAAGCGAGCCTCGAGGTCGCCGGGGCGCGCTGCGGCCTCCTCGCCGGGTTCGACAGCCTCCGCCGGCCGTACCGAGCCTTCCCCATCGTCGCGTCGAACCGGCACGTCGAGACCATCTTCGCCGCCTTCGCGCGGTCGCTCCCGGCCGTCGCGCTCCGCCGCGAGTGCCTCCGCACGCCCGACGATGGCGCCGTCGCGCTCGACTGGGTCTCCGGCGACGACCGTGCGCTTCCGCGGGACGCGCCGGTGCTCATACTCCTGGTATGCCTGTCGCTTTCCCTCTCGTAGTCTCGTGTGTGGTTGCGCGCTGTATGCCTGTATACATCGAGCGTCAATGCATTTGCTGGTAGTTAGAAATGAATCGATGAATGAGATTTGATTCGCATTGGGATTGGGATAGTATTTTTTTTGTTCAGAAATGGCCAAATAACACTGGTAGGATGACTAGTCCAGGATCGAAGTAGTCTAGTGTTCAGAGTGGCTAAGTGAAAAGCAACTAAGCTTTTGCCGTCATAATATTTCCCCCAAACGGGAGATTCTAGCAGCATTTCGTTGACCTGCTCCAAGGAACAGGTTCACGACATCTCAGATGACCCATTGAAAGCATCTGACAGAACTAAAATTAATCGTCCAATGTGCAGTCAAAGACATCCACTCCATATATGACCACAGAACTGAAATCAACTGATCTGACTTCTATTTTACCTTTTATCTTTACTGTTAGATGGCCAGTGCTTATCTGTAGTTCAGACATGCATTTAACTAGCTTATGGTTAGTGACTAATGCTTAAAGTTCGACATCGGCAGCCTGGTCTAACAGGGGGAAGTGATGATACATATGTAAGGCATATGCTGTTAAGAGCTAGAAACAAAGGATGGCGCGTGGTGGTGTTTAACAGCCGTGGATGTGCAGGCAGTCCAGTGACTACAGCCAAGGTACTTTATCAAATATTTTATTAATCTCATTGTATTCACTAAATTCAGTAGATCCTGAAAAATCAAGTAACAATTGAAAAAAGAAGTCAGAATCAGTTGATCAACTTTACTCTCTCAGCTGGTAGAGGTTGTTTATTATGGGACTGTTTTTCAGATTTTCATCCTGTCTGATACATGTAGCTTGCACTTTAGTTGGTTCTGATCACTCTTAATTAAGCTGAATGTTGTTTATGCTCTTGCTGGGAATATGACATGAGCCACCTACTTCAGCACCATATGGTGAAGGGCTAATCCATATGGCTCCTAATTCCATGGTAGTGTTTGGCACTCAGATATGTAGTCAACAATGAAAGGTTAATTCAGTTTTGCACTTCATTGTTGACCTTTTTTTTTCTAGAGAACATTTCTTCCTATTATATTGGGAAAAAAAATGGTTGTCTTGTGTCCTTCAAACTTATCAGCATCTTTTGGCTAACCTGATCTATAATGCAGACATATTGGCAAGCCACCATTCACCATGTTCATAAGCCTTAATATTGAATATTGTGGAGGAAACCTACGAATTAGCAGACTGTATAATATAATGGAGTCAAATCACATTTAAAGCAAAAAAACGCTACAATATCTCGTCTTCTTAAAACGTGATTTTCCTGTCATGTGCAGTTCTATTCGGCATCATTTACTGGAGATCTCCGGCAAGTAGTTGATCATGTTTTAGGACGTTTTCCTCAATCTAACGTTTATGCTGTTGGCTGGTCTCTTGGAGCAAACATTCTTGTGCGCTACCTTGGAGAGGTGAGTTCTTTACTCATTGATGATGAGCCTACAGTTCTACACAACAGCATTTTTTTTCCTTGTGCCATATTTATCAGGGTTTATTTCATCTTGAAGTCATATGATTTACGTACTACCTTTTGTAGCTGATGATGACTAGGAGTTGACCTATATATGTGCCACTTTTGTTTGATTCAGTGTGTGATTTAATCCAATATGTTTTAAACTTATGGACTTGCTCCTTTTTATCACCTAATAATTTGATATGTGTTTTTTTTTCTGCATTAGGTTATATAGAATTGATCCCAAGGCACGCTTTACTCTAACAGTCTGAAACTTTACAGCTATATGTTTTCTCTTTCCAGGAAACTGATAAATGTGTTCTTTCTGGAGCTGTGTCTTTGTGCAATCCATTCGATTTGGTAATTGCAGATGAAGATTTCCACAAAGGATTTAACAATGTCTATGACAGAGCACTTGCTAAGGCTCTGAGGAATATATTTAAGAAGTATTCTTCTGTTCACCTTTCATCAAATCTAAATTACACTGCTCTCCTTCAATGAATTCTAACAGTTGACTTTTAGGGAATTCATAAAATTTTAGGCATGCACTTCTTTTTGAAGGATTGGAAGGTGAATATAATATACCAAAGGCAGCGAATGCAAGATCAGTTAGAGACTTTGATGAAGGGCTAACCCGAGGTTTGAAATGACATCAAGCATAACTCTTACCGGATGCTATTCATTTTTTTTCTCTGTTGGGACCCGCATTTAAAATTACACTTCAATTTTATGCAGTTTCATTTGGCTTCAAGTCTGTGGATGATTATTACTCCAACTCAAGCAGCTCAGATTCCATAAAAAATGTTTCCATACCCTTATTGTGCATACAGGTGAAACTACTAGTTCTATATGCTTCGCTCACACATTAGGAACAACAATTATCTTATTACTTAGTTTGATAGTATCATTTTGTCATCCTTAGGGAACAGTAAAAATATTTAGTCAAAATTGTAAAGCAAAAATAGAGCAGGAGTATCTCAATGCAAGTCAACTCATGGCCTCTTAATTGTGTAATTTTTTTTTAGAAAATGGATTAAAATCTGGCCTCTACATCCACAATGGATGTACACAGCCCACTTAATTGTGTAATTGAAATGCCAGGGGAAAAAAACTTTTGATTGCTTGCCTTGGTCTTGCCAATATAGAACAAATTACTTCAATAATTCTAGATGACAATAGTTACGGTATTGCACTTCCATTCACACATTACTTCAAGTCGGCACTATGGAATTCATAGAGCAATCATGGAATAAGGTATACATGAAGGCTTTAAAAGTAGTTAGATCTGTTTGTACTTCCATAGACATGCTGGAAAACAAGATCAATGCTCAACAGTTTGTATTCAGTTGTCAGTACTGGTTCATATATTATACAATGAAAACAATTTGGCTTTCTCTCTCAAAAAAGAGAAAACAATTAGGCCGTACAATCACATATTAAGGGTTGCTTAGATATTTTCTGCTATAGTTTTTTATTCTTGCTTAATTATGTGCAGGCGGATAATGACCCAATTGCACCATCTAGGGGAATTCCCAGAGAAGATATCAAGGTATTCGCTTGTCGCAGTTTGTACTTTGTAGTATGCACCCTACTGGACCCTATTACTCAGCGTTGATCTCTTGCATAAGAACATGAGGCCAGCATACCGAGTCTAATCCATGAGAGTTCTGTTTTAAGTCAACAAATAAGAGTGCATGCAGATCCAAAGGGTGAAAAGTAGAACTTTGTTACTTCTGTGTACTGTAACTTGTTGATTAAAAGTACAATTTCCGGGTCGTGCTAACTGAAATGAGAATCATATCTAACTGGGATTCAGGTACTCTTATGTGGGGGGTTTTGTTTTATTAATTAATGAGTGAATTGAACTATACAACAAAGACAACAAATTTGGGTTTGGCTGTAATGCCATAGTCTAATGCGTCTAATTGGAGAGTCGATCTTTCTTTTTCCACATCACCAAGATAGTCATGAATCCTACCAAGATAGGATAGAAAACTCAATAGGGTACTGCACCTACCTTTTACACTGAGATAACTGAAGGCCTGTAACTTATGATTCATTCAATAGTTATGTATTTATTCTGCTCTGTGTTGCTCTAAAATGACTCAAGAAAATCTTGTTATTTTATCTTTTCAGGCGAACCCGAACTGCCTACTGATAGTAACACCACAGGGTGGTCACCTTGGATGGGTGGCAGGTGAAGATGCTCCATTTGGATGCCCTTGGACTGACCCAATTATAATGGAGTTTTTAGAATATGTTCATAACGAAAAGAACTCTAGTACCAAGGGTAGCATCTCATATGAGCAGCAGAGTGTTACACAAACGTCAGCCCCAGATGTCTCTGTGCATGTGCAGCGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005933