BGIOSGA005943

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Revision as of 02:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005943| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005943, complete gene.| tag = P0030D0...")
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Gene Name

BGIOSGA005943

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005943, complete gene.

LocusTag

P0030D07.11

Ensembl Transcript ID

BGIOSGA005943-TA

Ensembl Protein ID

BGIOSGA005943-PA

Length

2777

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27723594..27726370

Sequence Coding Region

27726025..27726370,27725769..27725944,27725565..27725683,27725304..27725452,27725079..27725200
,27724219..27724435,27723999..27724128,27723594..27723891

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27723594..27726370 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27723594..27726370 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGATACTGCTCCTTCCTGTGATACTTACCTGTTGTTCAATGGAGAAACACTGCTTCCAATTGGTGTCCGTGCGTTTATTTATACCGCTGTCCTCGCGTACTGTTTTATTGGTCTATCCGCGATCACTGGCCGGTTCTTCAAATCGATGGAGAGCATCATGAGACACTCCCGGGAGGTTGTCACAGTAGACCCACACACAAATGCTACTATTGTCAAGCATGAGAAGGTGTGGAACTACACTATAGCGGACGTTGCTCTCCTCGCATTTGGTACTAGCTTCCCTCAAATTTCACTAGCAACGATTGACGCAATCCGAAATCTGGGTCAGCTGACAGCAGGAGGTTTAGGTCCAGGTACCCTTGTGGGTTCTGCTGCATTTGATCTGTTCCCCATACATGCTGTTTGTGTGGTTATGCCAAGGGCAGGCTCTAAGAAAAAGATATCTGATCTCGGTGTTTGGTTAGTTGAGCTGTTCTGGTCATTCTGGGCATACATTTGGCTGTATATTATATTAGAGGTGTGGACACCTAGAGTGATCACCCTCTGGGAGGCCTTGCTGACAGTACTGCAATATGGACTGCTTCTGCTTCATGCATATGCGCAGGATAAGCGCTGGCCATATGTGTCAATCCCTTTGGCAAGAGGTGAGAGACCTGAAGATTGGGTTCCGGCGGAAGATGCTTCAGTTGATTATGATGATAACTATGATGGGATTGGGGATATACTCCCTGGCCAGAATGAGGATATTGTGGATATATTCTCAGCGCATTCTTACAGTAATGAAGGGTATCACCATGTTTCAGAAGAGGATGTGGAAGAATCTTCAACAGGTCTTACATTAAAGAACAAATGGGAGGATACTCACTGGTTTTCTATTTGGTGGCAACAATTTGTTGATGCTGCAACGTTGGAGAGTTCAGTGTCAAGAAAGATGGATTCTACCTGCTTGAGAGTCATCGGAATCTCATGGAATTTAATCATTGCACCTTGGAAAATGCTATTTGCTTTCGTTCCCCCTTATGAAATTGCGCATGGCTGGATCGCTTTTATTTGCTCACTAATCTTCATAAGTGGTATTGCTTATGGGGTTACTAAGATTACAGATCAGATAAGCTGTGTCACAGGAGTAAGTCCATATGTTATAGCATTCACAGCACTGGCTGCTGGAACATCATGGCCTGATCTAGTTGCAAGCAAGATAGCGGCTGAGCGTCAAATCACCGCCGACTCCGCAATCACCAACATCACTTGCAGCAATTCGGTGAACATATATGTCGGCATTGGTGTTCCATGGTTGGTGGACACAATGTACAACTATTTTGTCTACCAGAAGCCCCTGTACATAGACAATGCTGCTGGCCTCAGCTTCTCCCTTCTGGTCTTCTTTGCGACGTCATTCGGTTGCATCACGGTTTTGGTTCTTCGTCGCGTCATACTTGGCGCCGAGCTTGGTGGCCCTAGGATGTGGGCTTGGGCAACATCAGTGTACTTCATGATCCTTTGGGTTGTCTTTGTTGTACTTTCATCCTTAAAAATCTCTGGAGTAATATAG</cdnaseq>

Protein Sequence

<aaseq>MADTAPSCDTYLLFNGETLLPIGVRAFIYTAVLAYCFIGLSAITGRFFKSMESIMRHSREVVTVDPHTNATIVKHEKVWNYTIADVALLAFGTSFPQISLATIDAIRNLGQLTAGGLGPGTLVGSAAFDLFPIHAVCVVMPRAGSKKKISDLGVWLVELFWSFWAYIWLYIILEVWTPRVITLWEALLTVLQYGLLLLHAYAQDKRWPYVSIPLARGERPEDWVPAEDASVDYDDNYDGIGDILPGQNEDIVDIFSAHSYSNEGYHHVSEEDVEESSTGLTLKNKWEDTHWFSIWWQQFVDAATLESSVSRKMDSTCLRVIGISWNLIIAPWKMLFAFVPPYEIAHGWIAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAGTSWPDLVASKIAAERQITADSAITNITCSNSVNIYVGIGVPWLVDTMYNYFVYQKPLYIDNAAGLSFSLLVFFATSFGCITVLVLRRVILGAELGGPRMWAWATSVYFMILWVVFVVLSSLKISGVI</aaseq>

Gene Sequence

<dnaseqindica>1..346#427..602#688..806#919..1067#1171..1292#1936..2152#2243..2372#2480..2777#ATGGCAGATACTGCTCCTTCCTGTGATACTTACCTGTTGTTCAATGGAGAAACACTGCTTCCAATTGGTGTCCGTGCGTTTATTTATACCGCTGTCCTCGCGTACTGTTTTATTGGTCTATCCGCGATCACTGGCCGGTTCTTCAAATCGATGGAGAGCATCATGAGACACTCCCGGGAGGTTGTCACAGTAGACCCACACACAAATGCTACTATTGTCAAGCATGAGAAGGTGTGGAACTACACTATAGCGGACGTTGCTCTCCTCGCATTTGGTACTAGCTTCCCTCAAATTTCACTAGCAACGATTGACGCAATCCGAAATCTGGGTCAGCTGACAGCAGGAGGTATACTTTGATCACCTCATGCAAATGTTTGTTCCAAAGCATCCGCAATTGTATCTAATTCGGTTTCTTGTGATTTGCAGGTTTAGGTCCAGGTACCCTTGTGGGTTCTGCTGCATTTGATCTGTTCCCCATACATGCTGTTTGTGTGGTTATGCCAAGGGCAGGCTCTAAGAAAAAGATATCTGATCTCGGTGTTTGGTTAGTTGAGCTGTTCTGGTCATTCTGGGCATACATTTGGCTGTATATTATATTAGAGGTAAGCCATACATTCTCATCCTGCTATCTAATTATAAGCACTAAATCTAGCATTAGGTCATATTAGTACTTTTTGCTGTATACAGGTGTGGACACCTAGAGTGATCACCCTCTGGGAGGCCTTGCTGACAGTACTGCAATATGGACTGCTTCTGCTTCATGCATATGCGCAGGATAAGCGCTGGCCATATGTGTCAATCCCTTTGTATGGTCCTAATCCCTTAAATAATCGTTCCTTTTATCTAATCTTTCCTGTGGCCATGTACAAATTAAGGATGCACTTTCCTGATGCTTCTAGTTTTATTTGCTGAAAACAGGGCAAGAGGTGAGAGACCTGAAGATTGGGTTCCGGCGGAAGATGCTTCAGTTGATTATGATGATAACTATGATGGGATTGGGGATATACTCCCTGGCCAGAATGAGGATATTGTGGATATATTCTCAGCGCATTCTTACAGTAATGAAGGTAATCAATTTCTGGTTTTTTTTCACTCACTATTTTCTTTACTTCGTGTAACAATTCTTCGGGGTTCGAATTATTCTGAAAGTAGTTTCTTATTGCCTTTCAGGGTATCACCATGTTTCAGAAGAGGATGTGGAAGAATCTTCAACAGGTCTTACATTAAAGAACAAATGGGAGGATACTCACTGGTTTTCTATTTGGTGGCAACAATTTGTTGATGCTGCAACGGTAATTTAATTCACTATCACTCTATATATTATACCTTGCCAATGCCATTTCCTGTTTAAATTAGAATTAATGCTCAGTTATTAGATCAATGTAGTTTGGCAAGGGTACTTTTGTGAGGGGGTACTTTCTAAACTTAATTTTGCAAGCCAACAAGGACATAACAATGACAAGATATTTTTTTAATGAGAGTTATGGTGGATTGAGAAGGATGTTCTAGACTTTATAAGACAACTGCAAAACTTATTTCTAGTTACGCATTCAGTGGAACTACAGGGGTGTATGACTTGGATAACTTATACAGTCAGGAGAACTTTATCTGTTGAATATCATCACACCAAATCAAATTTTATGCCGCTCTTGTGCTGTATTCTTGTGTTATTGGTTTACCATTTCTAATATATCACCAAAGGCAAAATAGAATAGTAAAGCATATTCTTTTATCTTTGTTTAAGAGTGTTTACCACAAGCCTAACAGTGTACAGCCTTCAGTTGATGAATCCTTCTTAGCAGATTTTAACATTGAATTGAAACCTAAGTCGCACTCGTTTTTAAGTCTTTGAAGTACATTGATTTGAACTGAAAGTAACAAAAATTGCTACAGCATTCCCATTGGTTATAAGTGATTTTGTTATTATGTGAGCAGTTGGAGAGTTCAGTGTCAAGAAAGATGGATTCTACCTGCTTGAGAGTCATCGGAATCTCATGGAATTTAATCATTGCACCTTGGAAAATGCTATTTGCTTTCGTTCCCCCTTATGAAATTGCGCATGGCTGGATCGCTTTTATTTGCTCACTAATCTTCATAAGTGGTATTGCTTATGGGGTTACTAAGATTACAGATCAGATAAGCTGTGTCACAGGTTGGAACATGCTCCTGTACAAGTTCAATTTATCATCTGTCAAGGGTGTAGCTGCTTGCTTGCTGATACAAAATCTACTATCCTGTGTAGGAGTAAGTCCATATGTTATAGCATTCACAGCACTGGCTGCTGGAACATCATGGCCTGATCTAGTTGCAAGCAAGATAGCGGCTGAGCGTCAAATCACCGCCGACTCCGCAATCACCAACATCACTTGCAGGTACATTTCTGCACATCTCCTCTCCAATTAGTTGTTCATGCCTACCTTCAACCTTTTGTAAATTTATCTTATCGAGGCGGGATAAACGGTATATCTTATTTCCACAGCAATTCGGTGAACATATATGTCGGCATTGGTGTTCCATGGTTGGTGGACACAATGTACAACTATTTTGTCTACCAGAAGCCCCTGTACATAGACAATGCTGCTGGCCTCAGCTTCTCCCTTCTGGTCTTCTTTGCGACGTCATTCGGTTGCATCACGGTTTTGGTTCTTCGTCGCGTCATACTTGGCGCCGAGCTTGGTGGCCCTAGGATGTGGGCTTGGGCAACATCAGTGTACTTCATGATCCTTTGGGTTGTCTTTGTTGTACTTTCATCCTTAAAAATCTCTGGAGTAATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005943