BGIOSGA005951

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Revision as of 02:31, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005951| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005951, complete gene.| tag = OsI_082...")
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Gene Name

BGIOSGA005951

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005951, complete gene.

LocusTag

OsI_08248

Ensembl Transcript ID

BGIOSGA005951-TA

Ensembl Protein ID

BGIOSGA005951-PA

Length

2220

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27592080..27594299

Sequence Coding Region

27594186..27594299,27593831..27594007,27593493..27593679,27592953..27593001,27592747..27592822
,27592532..27592621,27592377..27592448,27592080..27592175

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27592080..27594299 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27592080..27594299 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCCTCGTCCTCGTCGTCGGCTGTCTTCCCACTGGACCACCTCGCGGCGCCGTCCCCCACCGAGCAGCTCTGCTACGTGCACTGCAACTGCTGCGACACCATCCTCGCCGTCGGCGTGCCGTGCAGCAGCCTGTTCAAGACGGTGACGGTGCGGTGCGGCCACTGCGCCAACCTGCTCTCCGTCAACCTCCGCGGCCTCCTGCTCCCTGCGCCGGCGCCGGCGCCGGCCAACCAGCTCCACTTCGGCCCTTCCTTGCTCTCCCCCACCTCCCCCCATGGCCTCTTGGACGAGGTGGCGTTCCAGACGCCGAGCCTACTGATGGAGCAGGCCGCGAGCGCCAGCCTGAGCAGCATCACGGGCCGCAGCAGCAGCAGCTGCGCCAGCAACGCGCCGGCAATGCAAATGCCTCCGGCGAAGCCTGTGCAGCAAGAGCCTGAGCTGCCAAAGAACGCCCCGGCGTCCGCGAACAGGCCTCCGGAGAAGCGTCAGAGAGTCCCATCTGCGTACAACCGGTTCATCAAGGATGAGATCCAGCGGATCAAGGCCGGCAACCCGGACATCAGCCACCGGGAGGCGTTCAGTGCAGCCGCAAAGAATCGGCAGCTTGTGCCCGGCCGCTTGCGAGATGCCGAGAGCAAGCGGCTGTGGTTTCTGGGAGCTTTTAGCCCCACAGCTGCTATAGCTAGGTGGGCCCATTTCCCTCACATCCATTTTGGCCTCATGCCGGATCAGGGGTTCAAGAAGACCTTCAAGCCTCAGGATGGTTCTGAAGACATTCTTCTCAAGGATAGCCTGTATGCTGCGGCAGCCGCCGCCGCCGCTGCAGCCGCAAACATGGGCGTCACTCCGTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MSSSSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNRQLVPGRLRDAESKRLWFLGAFSPTAAIARWAHFPHIHFGLMPDQGFKKTFKPQDGSEDILLKDSLYAAAAAAAAAAANMGVTPF</aaseq>

Gene Sequence

<dnaseqindica>1..114#293..469#621..807#1299..1347#1478..1553#1679..1768#1852..1923#2125..2220#ATGTCGTCCTCGTCCTCGTCGTCGGCTGTCTTCCCACTGGACCACCTCGCGGCGCCGTCCCCCACCGAGCAGCTCTGCTACGTGCACTGCAACTGCTGCGACACCATCCTCGCCGTACGTGCTGTGGCGCCGATCGAGCTAGCCACCTACCTACCGACAGCGCGCTAGCTTCAGAGCTTCTTAGCATTAATTCTTCGTTTGTTAGTTCGTTTCTTGTTTTGATCGATCTTTTGTTTCTCTTGATGCATGACTAACCTGTGAGTCCCCGTGCCCAACTTCGATCTCCACGCAGGTCGGCGTGCCGTGCAGCAGCCTGTTCAAGACGGTGACGGTGCGGTGCGGCCACTGCGCCAACCTGCTCTCCGTCAACCTCCGCGGCCTCCTGCTCCCTGCGCCGGCGCCGGCGCCGGCCAACCAGCTCCACTTCGGCCCTTCCTTGCTCTCCCCCACCTCCCCCCATGGCCTCTTGGTATGTATCCACCTAACTTGCTCTATATATCTCTCTCAAATTCTCCCATGCTAGCTCTCACGTTTTAGTGAGGTGCTCAGCTGAGAATCATACATTATATTCATACTGACGTTTAGCTCTCATGGGTGTGACTGTGTAATTTCCGGTGTAGGACGAGGTGGCGTTCCAGACGCCGAGCCTACTGATGGAGCAGGCCGCGAGCGCCAGCCTGAGCAGCATCACGGGCCGCAGCAGCAGCAGCTGCGCCAGCAACGCGCCGGCAATGCAAATGCCTCCGGCGAAGCCTGTGCAGCAAGAGCCTGAGCTGCCAAAGAACGCCCCGGCGTCCGCGAACAGGCGTAAGTACAGTACTACTACTACAAGCTTGGTGTTCTTTCTTTGAAACGCTAGAATTTTGTAGTCAAAGGTACTTATGCACCACAGTGTGTTCTCCTGCTAGCTTGTTGCTTATTCACCGTTGTTTGGGAGGTTTAAGAACAGAAAGCTTGCTAAGAGGGGTTAATTAGCTACTTATAGCTCCTACTTAGGCATATATGCACACATTAGCGTACTAGTGTACGTGTTGAATTTCAAATTCCAATCCAGTGTTTCTTTCGAGTGTGTGAAATTAATATGTACTATATTCACTTGAAGAACGCTCCTCAGCACTAGAAATGATAGTACAGATCAACAAGGCATGCGATCATGTCTTGTTGTGGCAGGGCCATGTAAGCCCATGCTTCGATCGATCCGGTCAGTATTTGCAGACAGCATGTATACCGATAGCTTAGGTGAGCTTACCCATTTGTCCATGTTTCCTCGGATGCTGTCTGATCCAAAACTTTTGCAGCTCCGGAGAAGCGTCAGAGAGTCCCATCTGCGTACAACCGGTTCATCAAGTAAGATTTCTCTATAAACCTTCTGCCTAATTAAAACTGATGGATCCTCCTTTGAGCTTTGGTTAATCAGTATTCGTGGTATCATCTCGTAAAAAAAAATTAATTCTGCTGATAATGAATTGCTACACAGGGATGAGATCCAGCGGATCAAGGCCGGCAACCCGGACATCAGCCACCGGGAGGCGTTCAGTGCAGCCGCAAAGAATGTAAACTTTCTTCGTCTGATCCGCGCATTAATGAACTCCTACTCATCCTGTAGTATCTAGCTTGATGCTAGCTGTTCGCGTGTCTTGATTTGACTGGACACCTTACATTGTCAGCACGGACACAGCGGCAGCTTGTGCCCGGCCGCTTGCGAGATGCCGAGAGCAAGCGGCTGTGGTTTCTGGGAGCTTTTAGCCCCACAGCTGCTATAGCTAGGGTTCGTTCGGATTTGTTTCGATCTCCTTTACTGATCCAAACCTGCCTTTGCTTTGGCTTTACTTTCCTTGTGCTTGCAATCAGTGGGCCCATTTCCCTCACATCCATTTTGGCCTCATGCCGGATCAGGGGTTCAAGAAGACCTTCAAGCCTCAGGTAACCAGAATCCCGAGAGAATTAACGTATACTACTATGGGAGACACAAGCATAACCTAGTTATCTGTGTAACCTGAACACTCATATAGCCTTATCAGAATTCAGACCCACCCGGCAAACACTGCATATGCACTGCTCTTATTTACTTTAGTGCTTTGCGAGCAATTCATCTGTAGCCGCTTCCTGTGTCGTGATTTTCAGGATGGTTCTGAAGACATTCTTCTCAAGGATAGCCTGTATGCTGCGGCAGCCGCCGCCGCCGCTGCAGCCGCAAACATGGGCGTCACTCCGTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005951