BGIOSGA005953

From RiceWiki
Revision as of 02:31, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005953| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005953, complete gene.| tag = OJ1112_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005953

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005953, complete gene.

LocusTag

OJ1112_G03.20

Ensembl Transcript ID

BGIOSGA005953-TA

Ensembl Protein ID

BGIOSGA005953-PA

Length

2468

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27558971..27561438

Sequence Coding Region

27561381..27561438,27560980..27561050,27560809..27560890,27560603..27560718,27560388..27560510
,27560234..27560275,27559532..27559609,27558971..27559078

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27558971..27561438 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27558971..27561438 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCTCCGACTCCAGGGAGCTGCTCGGGATCGATCCCCCGGAGCTCATCTTCCCCTTCGAATTAAAGAAGCAAATCTCGTGTTCTCTGCACCTAACAAACAAGACAGATGAATATGTCACGTTTAAGGTTAAGACAACTAGTCCAAAGAAGTACTGCGTCCGTCCAAATAACGGCATTGTGGCTCCCCAGTCCACATCCGATGTTCTTGTAACAATGCAAGCTCAGCGGGAGGCGCCACCGGACATGCAATGCAAGGACAAATTCCTTGTGCAGAGTGCCATAGTGACACAAGAGCTCACACCGAAGGATATCACCGGAGACATGTTTACGAAAGAATCAGGTAATGTGGTGGATGAGGTGAAGTTAAAGGTTGTTTATACTCAACCTCACCCGACATCTCTCAATGGCGGGTCTGAGGAAGGTCTAGGAAGCTTGAGTTATCAAGAAGCAACAAAAGGATCTAGAGAATCAGAAACAGTAACCTCTGAGCCATTGGCCTTGATTTCAAAGTTGAAGGAGGAGAAGAGTTCTGCCATTCAACAGAACATGAAGCTTCGAGAAGAACTGGATCTTCTAAGGAGGCAAATGGGGAGTCAGCACGGTGGTTTCTCACTAGTTTTTGTGCTGGTTATTGCTATTCTGGGAATCCTGCTTGGTTTTCTCATTAAGAGATGA</cdnaseq>

Protein Sequence

<aaseq>MSSDSRELLGIDPPELIFPFELKKQISCSLHLTNKTDEYVTFKVKTTSPKKYCVRPNNGIVAPQSTSDVLVTMQAQREAPPDMQCKDKFLVQSAIVTQELTPKDITGDMFTKESGNVVDEVKLKVVYTQPHPTSLNGGSEEGLGSLSYQEATKGSRESETVTSEPLALISKLKEEKSSAIQQNMKLREELDLLRRQMGSQHGGFSLVFVLVIAILGILLGFLIKR</aaseq>

Gene Sequence

<dnaseqindica>1..58#389..459#549..630#721..836#929..1051#1164..1205#1830..1907#2361..2468#ATGAGCTCCGACTCCAGGGAGCTGCTCGGGATCGATCCCCCGGAGCTCATCTTCCCCTGTGCGTTTTCTTGTCCCGAGAATTTCTTTTTGGGGGTTTTTTGAAGGGAGTTTTGCAGTTCATTCGGTGGTTCCGATGGATTTCCGGGTGTATTTTAATGCGGCCTCATTCGAGAAATTTATGTATGAAGAAATTTCAGGGTTGTTCTCAGGGGGAATTTTTCCTTCTTTTTTGAGCTAATATTGATTGTTCACTTCACCGATAGTCCGATTTGCCTTTGTTTTAAGCATATTCTTTTGTGCAAATTTTGGTTATTCTTTAATATGTGATGATAATATTGTGTCTTGTTCAGAATATTCATCCTTTCGCATCCTTTTTTTAATCATGCAGTCGAATTAAAGAAGCAAATCTCGTGTTCTCTGCACCTAACAAACAAGACAGATGAATATGTCACGTTTAAGGTATTAATAAAATCTTTTTGGCCTCTAATTCCGAGGAAATATGCATTGCAGTAATAAGTAACTAAATTAATTCAACATCGTTTCTCCAGGTTAAGACAACTAGTCCAAAGAAGTACTGCGTCCGTCCAAATAACGGCATTGTGGCTCCCCAGTCCACATCCGATGTTCTTGGTAATTTGATGAATTGCGTCAGTATTATCTTATTCTGAATGACTGCCTTTTATGCTAAGAATTTAGTTATCAATTGATTATCAAATCTAGTAACAATGCAAGCTCAGCGGGAGGCGCCACCGGACATGCAATGCAAGGACAAATTCCTTGTGCAGAGTGCCATAGTGACACAAGAGCTCACACCGAAGGATATCACCGGAGACATGGTAACCAACCGACTTTCTAGTTTCTAGTGTGTCCTGCATTTGTAGCTTATGTTGGCTGCTTTCTTTGTGTCCTAATGAGTGATCCTATGTAGTTTACGAAAGAATCAGGTAATGTGGTGGATGAGGTGAAGTTAAAGGTTGTTTATACTCAACCTCACCCGACATCTCTCAATGGCGGGTCTGAGGAAGGTCTAGGAAGCTTGAGTTATCAAGAAGTAAGGCTTTCATCAATTTCATGTCTAACAGCTATCCGCCGTCGTTTCTTGTTAGTGCATTGATCCTTCATTGCCTTATCATCTGAAACAAATTGTGAACTTCTCTTTGCAGGCAACAAAAGGATCTAGAGAATCAGAAACAGTAACCTCTGAGGTATGCATCTTCAGATGGGAAACATCTATGTTTTCTTGTGATAGGTGTCATAATTTAGAGATACTATGTGTGATTTTATCCAAGAGCATTGCTTCAGAAGTTGTTTAATTATATTTTACAGTGTTGCTGTGCTCTTCTTATTTCCTAGTCCTCTGCATGACACTTGTTTTAGAACTCTGATCCAACAGAACTATGTGTGTGCTGTTTTATGCTATGCACTTTGTTTTTTCCCTGAGGAAAACTATGTACTTTTCTTGATATATGTGTTGCAATGTTCTCTTGTTAAATTTGACAATGACATGTTATCACTAAATCCTAACTTCACATACTACTATAAATTTATTTTTGCTTGTCAATCTTCTTGCTCCACTCTACATGTATGATCTTTTGATTAATGTTCTCCTTGCATAAATCATGGCTCTTCATCTCAACATATTTAGATGCCAATGATAACTTAATCTGAGGGATGCTTCATCCTCTAGCATATCTTGACTTTGTTAGCATTTTACTTTTGTTACAAACTGAGGAACTGAGAGGTCTTCTTATAGAGGATTCCAACTTCCTATGCTACCTGACAATGATGCCAAAGCACAATATGCTGATCTCTTTCACAACTATGTGCAGCCATTGGCCTTGATTTCAAAGTTGAAGGAGGAGAAGAGTTCTGCCATTCAACAGAACATGAAGCTTCGAGAAGAACTGGTTAGCTTGATTATGCAAACATTTAGTGACCCAATATATTTTTTTACTTTGGCAGTAAGAAATAGATTAATTTATCCCCCCGCATAAGCTAGTTAGGTTTAAGCAACAGCTATGTCGATAAATTTGCATCTCCAATAAATAATCACCACATGATTTACTCATTCCCTGTTCTTTTACTGAGGCCAGCAGTGACCAGTCCACCCGAAAAAAACACTAATACGTTTTTTAGCTTTGAGTTAGATAGACAGAATAACCAGTTTACATGCGCTTTATGTTTTTCTTTACTTTTTTGTCAAGTTTATTTGCAACCCACTAATTTCTACAAGTACAGATGTATTTCGTTATCTACAAATATCATCTTGTTTGTCTATTATGGCTTTGTGCATCAATGAAATCTGAATCTAAACTGCAACACTCACGTAGTTTCATTTATCTTCTATTGGAATTGAACAGGATCTTCTAAGGAGGCAAATGGGGAGTCAGCACGGTGGTTTCTCACTAGTTTTTGTGCTGGTTATTGCTATTCTGGGAATCCTGCTTGGTTTTCTCATTAAGAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005953