BGIOSGA005971

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Revision as of 02:31, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005971| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005971, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA005971

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005971, complete gene.

LocusTag

OSJNBA0014E22.23-1

Ensembl Transcript ID

BGIOSGA005971-TA

Ensembl Protein ID

BGIOSGA005971-PA

Length

5159

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27290679..27295837

Sequence Coding Region

27295635..27295837,27293881..27294121,27293610..27293696,27293349..27293518,27292790..27292932
,27292524..27292701,27291817..27292414,27291505..27291617,27291179..27291422
,27290679..27290906

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27290679..27295837 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27290679..27295837 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGATCGTGGAGACGTGGATGCGGGAGAAGCCCATCCGCACCTTCCTCGCCCAGTTCTCCACCCGCCGGGCGGCGGCGGGGGCCGCGGCCCTGCTCGCTTCCTCCTCCGCCGCCGCGGCGTCCGCCGACGGCGAGCCCGGCGACCGGAGCATCCCGCAGCTCTCCTCCATCGCCAACTCCGTCGTCTCCCGCTGCTCCAGGGTTCTTGCTCTTGCAACCGAAACCTTGCAGCAAAACTTTGAAGTTGACTATCCCGATAGTTGTAAGGAGTCCAATACATATGCAAAGGAATTTTTAGAGTACTGCTGCCACAAAGCTCTCCATGAAGTAACTACACGTCCAGATCATTTGGCTGATAAGAATCTTCGCCGTTTAATGTTTGATATGATGCTTGCGTGGGAACACCCAGGTGCTGTTGTTGAGGATGAATTACCAGAAAATCATTCTGCTTTGCGTACAACTGTGGATATTGAAGATGATGACGAGGGATCAATTTTTTATGCAAATTCCACAAGATTGGCGGTTCAAGTCAATGACAAGAAGACAGTTGGCTTAGGTGCTTTTGCACGAATAGCACCTTCATGCCCTATAATAGCTGACTTGGTTACTGTCCACAATCTGTTCGATGCACTCACATGTTCATCTGGTGGCCGCTTGCACTTTTTCGTGTTTGACAAGTATATCAAAAGTTTAGACAAGGTATTCAGATCTGTCAAAGGTATATTGCAGTCACCGCTTGCTTCAAGTTTTCATCTTGATGCTGGGGAATGTATCTTAGCTATGGATGGAGACAGGCCTATTCATCCTGTTTTTCAACACATTGGAATATCAGCATGGCCAGGAAGATTGATTCTTACAACTCATGCTCTTTACTTTCAGAGTATCAAAGTGGGTTATGGTGACAAGATTGTTAAATATGATTTAGCAACAGATTCTGATCAGGTTATCAAGCGTGATTTTACTGGGCCATTGGGTGTTCGCCTGTTTGATAAGGCTGTGATGTACAAATCAAGCACTTTAACAGAGCCAATTTATTTTGACTTCCCTGAATTAGGAGGTCCCTCACGAAGAGACTATTGGTTAGCAATCGCTCGTGAAGTATTGCAGGTGAATAAATTCATCAGGAAGTTCAATCTTGAAAACGTTCAGAGAGCGGAAGCACTCTCAAAAGCTATCCTGGGCATCTTGAGATACTCTGCTGTGAAAGAAGCTTTTCATATTTCTCCTTCTCACTTTAAGACAACACTCACTTTTAGCTTAGCAGAAAAACTTCCAAAAGGAGACATGGTCTTAAAAGCCTTGTATGATAACTACTTTCAACTGTTGGACACTTCGTTGAGTCATTTGGTGACTGAGTCACCCGTTGACAATAGGCTGCAGAACCATTCATTACCATTTTCATTATATGCTCTCTCTAGAATGGGATTTATATTACTGAAGAGAAAAGATGAAGCTCAAAGTGAGATAAGCTTTTGTGCTGTTTGCTTTGGTGTAACAAAATCTCTAGAGGCTGCTTTGGAAGAGTCAATTTGTTACTCTGAGAGAATAGATGCAGCACGTGCAACTATAGATCAAGTAAAGGTGGAAGGTGTGGATGCAAATCTTGCCCTCATGCAGGAGTTACTTTTCCCATTCATTCAAGTAGTCAAACTCACTTACTCATTGACCAAGTGGGAAGATCCTCTGAAATCATTTCTGTTCTTAGCTTTTACCCTGTATGTTATTCAAAGGGGATTTATTGCTTACATGTTGCCCTCATTTTTTTTGGCATTTGCTGTTGTTATGCTCTGGCATAAGTACAATGGAAGGGAGCAATTATTGGGAGTGCTTGAAGTAAGAACTCCTCCAAGTAAAAATCCTGTTGAGCAAATCTTGACCTTGCAGGATGCTATATCCAAGTTGGAAGAAACTCTACAGTCTGTAAATATTGTTCTTCTAAAGTTCAGAGCTGTCTTGTTTGCAGCTGTTCCAAAGACAACTGAAATGGTCGCAGTGGCATTTCTTGCTGCATCTGCATTTCTTATCTTTGTACCTTGGAGACATCTGCTCCTGATTGCAGTCCTGGAGGTGTACACAAGAGAGATGCCGCTAAGGAAACAGAACACTGAAAAGTTCCGCCGGCGGATTAGAGAGTGGTGGGCCCGCATTCCAGCCGCTCCTGTGCAGATGATCAAACCCAACGAAAGCAAGAAAAAGAGATGA</cdnaseq>

Protein Sequence

<aaseq>MGIVETWMREKPIRTFLAQFSTRRAAAGAAALLASSSAAAASADGEPGDRSIPQLSSIANSVVSRCSRVLALATETLQQNFEVDYPDSCKESNTYAKEFLEYCCHKALHEVTTRPDHLADKNLRRLMFDMMLAWEHPGAVVEDELPENHSALRTTVDIEDDDEGSIFYANSTRLAVQVNDKKTVGLGAFARIAPSCPIIADLVTVHNLFDALTCSSGGRLHFFVFDKYIKSLDKVFRSVKGILQSPLASSFHLDAGECILAMDGDRPIHPVFQHIGISAWPGRLILTTHALYFQSIKVGYGDKIVKYDLATDSDQVIKRDFTGPLGVRLFDKAVMYKSSTLTEPIYFDFPELGGPSRRDYWLAIAREVLQVNKFIRKFNLENVQRAEALSKAILGILRYSAVKEAFHISPSHFKTTLTFSLAEKLPKGDMVLKALYDNYFQLLDTSLSHLVTESPVDNRLQNHSLPFSLYALSRMGFILLKRKDEAQSEISFCAVCFGVTKSLEAALEESICYSERIDAARATIDQVKVEGVDANLALMQELLFPFIQVVKLTYSLTKWEDPLKSFLFLAFTLYVIQRGFIAYMLPSFFLAFAVVMLWHKYNGREQLLGVLEVRTPPSKNPVEQILTLQDAISKLEETLQSVNIVLLKFRAVLFAAVPKTTEMVAVAFLAASAFLIFVPWRHLLLIAVLEVYTREMPLRKQNTEKFRRRIREWWARIPAAPVQMIKPNESKKKR</aaseq>

Gene Sequence

<dnaseqindica>1..203#1717..1957#2142..2228#2320..2489#2906..3048#3137..3314#3424..4021#4221..4333#4416..4659#4932..5159#ATGGGGATCGTGGAGACGTGGATGCGGGAGAAGCCCATCCGCACCTTCCTCGCCCAGTTCTCCACCCGCCGGGCGGCGGCGGGGGCCGCGGCCCTGCTCGCTTCCTCCTCCGCCGCCGCGGCGTCCGCCGACGGCGAGCCCGGCGACCGGAGCATCCCGCAGCTCTCCTCCATCGCCAACTCCGTCGTCTCCCGCTGCTCCAGGTACGCCGTTATCCGGTTCCGGGGCGACGAATCTGTTGTTCTCTACTCCACTCGGGGTTTGGGGTTGGGGGATGGAGGTTGATCCAATCCATTTAGTGACTGTTTTGCTTTTGCTCATCCGCAACGACGGCAGCGCTTAGCTCGGCCGATCTGGGTGCTCTCGATCGGTGTGGGTTGCATTACTCTACCCCGCATGATCACGCTGAAATAGTACTGAACTGCCAGAGATTGCATAGGACCCAAACTTAACTCGTATATTTGCTGGTTTGCTCAGCGGATGCTAAAATCAGTGTATGCTAATCCATCATTGCTTATTAGGTAAATTGATTTGGTTTACCAATAGAAGAGTAGCGTGCTTCTATAGTTATATTCTCAAGGCCGATAGACTTGATTTCAATGTACTGGCATACTCTCCATAGGATCAATATTGTCACTCCTGGAAATGGTGAGGGTAATATTAGCTTTTTTTATTTCTGAGTAAATTTCACAAAACTACATGTTTTATGGTTCAAGTTGCAGAAAACTACATACATTTTGACACTTGGCACTTAAGTACATATATTTTGGTAGTTTAGTTTCACAAAACCACACTATCGATGAATGGATTCACCCATGAGATAACGTGGTTATTCCATCAAGGCTGAGGACGTGGCATCCTATTAATTTCGTGTGATGGCTGGTAATAGGATGTCATGTCCTCATCCTAGGTGAAACAGTCACGTCATCTCGCGGGTGAATCCATTCATCGATAGTGTGGTTTTGTGAAACTACACTACCAAAATATATGTACTTAAGTGCTAAGTATCAAAGTGTGTGTGGTTTTTTATGCAACTTGGACTACAAAACGTGTAGTTTTGTGAAATTTACTCTTTATTTCTGGACACTTGGCCATTGTGAGCATGTGATCCCTATATATATATAGGGCCTGTTTGGTTGGTGACCTGAGTATTGTGCCTGAGAAAATTGCATGCCTGAGTTTCACATGAGTTTTGATGATTATGCCTGACAGAAACTTATTTGATTGCTGACTCGTGCCTAAGAGATCTAGAAACTATGATTATCTACATTATTTATTCTTAAACACTAAATTAACCATGGATTATTTATTCTTCAACTTTGAATCAACCATAGATTATTTACTATTAAACTCTGAATTAATCTTGTTCAGCCAACACTCTACTTATCTAAAGCAAACAGGTCTGAAGGAGGTCAACAGAACACAAACAAATAAAGGCAACAACCTGTAGCGTTGCAGGATGGTTAATTAATGCAATAATCACTGATCAAGCACTCATGCTAACTTGTTAAGGGGAGTACTGAGAATCATATGCTAGCCACAATTGGATCAACTTCCATAGCTTACTATTGTCTATTGTAGTTATCTTTAATTTTTAAATACACTGACATGATCATGTTTCTGCTTTGTTTGACCACTCTTATATGATTTAAGTTGTAATTTCTTGTTATGCCTGACAAACTTCTAACAAGTTTCTTCTCAAATTAACATTTTCAGGGTTCTTGCTCTTGCAACCGAAACCTTGCAGCAAAACTTTGAAGTTGACTATCCCGATAGTTGTAAGGAGTCCAATACATATGCAAAGGAATTTTTAGAGTACTGCTGCCACAAAGCTCTCCATGAAGTAACTACACGTCCAGATCATTTGGCTGATAAGAATCTTCGCCGTTTAATGTTTGATATGATGCTTGCGTGGGAACACCCAGGTGCTGTTGTTGAGGATGAATTACCAGAAAATGTGAGAAACATTTCTTTCTGTAGTTTGTTTGTAATATTCTTACTTCTTCGTTTTATCAAAATGTTTATATTTCAGCAAAAGGGAAAAATATTGCCAAATCTGCATTTTTTGTGTAAAACTTTCACAATGTATGAGTTTACTCTACGATGTTCAGCAGTCATTCTAATTGTGCTATGATGGTCAGCATTCTGCTTTGCGTACAACTGTGGATATTGAAGATGATGACGAGGGATCAATTTTTTATGCAAATTCCACAAGATTGGCGGTTCAAGTTAGTTCTGTTTACAAACTACATTGCTTTTTCTAACCTGGAAATAATTCTTCACTGTGCACACACATGATCAATTGCGGTCCATTTTCAGGTCAATGACAAGAAGACAGTTGGCTTAGGTGCTTTTGCACGAATAGCACCTTCATGCCCTATAATAGCTGACTTGGTTACTGTCCACAATCTGTTCGATGCACTCACATGTTCATCTGGTGGCCGCTTGCACTTTTTCGTGTTTGACAAGTATATCAAAAGTTTAGACAAGTAAGGAATACAACTTATTAGATTATTGCGCTCTCAAAATTCATTTTCACTTCTGTTTGTCAATGTCTTCTGAATCTGTGCATAGTTATCTTGTAATGACCGTTGAAAACTTGAAAGAGTGATTGTGTTGAGTTGAACTATCCGTGTTCTAACTCTGCATATGGAGTTTCACAGCAGTAGGTCTTCTGTTGTAGAATGGATCTTCTTTCCGGAACATAACTGGTCATTTATTATAGATAATTGAATTGCTGGTTGGGCAAAACTGGTGAATGTTGCACATGTATCTTGGATATTAGTGACAAAATACGTGGGGAGGGGGTTCTAGATTTTTGGTAGTTCTTTCTGCTTCAAATCTATCGTTGTGATTGAGTCAATAAAGACACTGAGAGGAGTATTATTGCTATTCTTACGTACAGGGTATTCAGATCTGTCAAAGGTATATTGCAGTCACCGCTTGCTTCAAGTTTTCATCTTGATGCTGGGGAATGTATCTTAGCTATGGATGGAGACAGGCCTATTCATCCTGTTTTTCAACACATTGGAATATCAGCATGGCCAGGTGAATTAGTTAAATTTGCATTTGATTTCTCAATTTGCAACCGTGCTTCATTTTGGCAAGTTACTGATGTTTTCATTCTTTTTCGCAGGAAGATTGATTCTTACAACTCATGCTCTTTACTTTCAGAGTATCAAAGTGGGTTATGGTGACAAGATTGTTAAATATGATTTAGCAACAGATTCTGATCAGGTTATCAAGCGTGATTTTACTGGGCCATTGGGTGTTCGCCTGTTTGATAAGGCTGTGATGTACAAATCAAGCACTTTGTAAGTATTGAAAGGGGAATGATTCTCCAATAGGACCAATTTCTGTTTTGCTAAGTATTGATTATACTTCTATGGGTTGCCATCAGAACTAACAATACATTATTTGCAGAACAGAGCCAATTTATTTTGACTTCCCTGAATTAGGAGGTCCCTCACGAAGAGACTATTGGTTAGCAATCGCTCGTGAAGTATTGCAGGTGAATAAATTCATCAGGAAGTTCAATCTTGAAAACGTTCAGAGAGCGGAAGCACTCTCAAAAGCTATCCTGGGCATCTTGAGATACTCTGCTGTGAAAGAAGCTTTTCATATTTCTCCTTCTCACTTTAAGACAACACTCACTTTTAGCTTAGCAGAAAAACTTCCAAAAGGAGACATGGTCTTAAAAGCCTTGTATGATAACTACTTTCAACTGTTGGACACTTCGTTGAGTCATTTGGTGACTGAGTCACCCGTTGACAATAGGCTGCAGAACCATTCATTACCATTTTCATTATATGCTCTCTCTAGAATGGGATTTATATTACTGAAGAGAAAAGATGAAGCTCAAAGTGAGATAAGCTTTTGTGCTGTTTGCTTTGGTGTAACAAAATCTCTAGAGGCTGCTTTGGAAGAGTCAATTTGTTACTCTGAGAGAATAGATGCAGCACGTGCAACTATAGATCAAGTAAAGGTGGAAGGTGTGGATGCAAATCTTGCCCTCATGCAGGTACTTTGGTGATAAAACAACTTAAATTGTTCTTATTGGTTTGGGATTGAATGGTTTCTAGAGTGCAGCAAGAAAAGATATCACGTTTCACTAGTTATTTGGTGCAATTTCATGAACTTTAGTGTCACCCAGATGTCTACTACAATATCATGCACCTTTGTTGTGACTTGAGTTCTGATGGATCGTGCTTATATTCCAGGAGTTACTTTTCCCATTCATTCAAGTAGTCAAACTCACTTACTCATTGACCAAGTGGGAAGATCCTCTGAAATCATTTCTGTTCTTAGCTTTTACCCTGTATGTTATTCAAAGGTAATTTCTTTGTGACTTTTGGATCTTAGAAAGTATGCTTAGAAATATCTCATTGCCTAACATATTCCTTTTTGTTATGTAGGGGATTTATTGCTTACATGTTGCCCTCATTTTTTTTGGCATTTGCTGTTGTTATGCTCTGGCATAAGTACAATGGAAGGGAGCAATTATTGGGAGTGCTTGAAGTAAGAACTCCTCCAAGTAAAAATCCTGTTGAGCAAATCTTGACCTTGCAGGATGCTATATCCAAGTTGGAAGAAACTCTACAGTCTGTAAATATTGTTCTTCTAAAGTTCAGAGCTGTCTTGTTTGCAGCTGTTCCAAAGGTATCTCTTTTGTTGTTTAGTATATTTGCTTTCCTTCGGTTCAAAAATTTCTTTACATCTAAGATGCACTTCCTATAGTTTGTTGTCCAATTTGACACAAATGATGAACTATCATTTGATTCATCAGACATGAACTGTTTAAGAACTTGTTCCTGAAGCTCTGACCTTCTCAACCGTTTTTACGGATTACTCCACAGCGTTGTAAATGAAGTAGTTTTGAATTTTACAGGAGATTAATCCACCAACTGCTAATCTCCTTTTGTTTTATGCAGACAACTGAAATGGTCGCAGTGGCATTTCTTGCTGCATCTGCATTTCTTATCTTTGTACCTTGGAGACATCTGCTCCTGATTGCAGTCCTGGAGGTGTACACAAGAGAGATGCCGCTAAGGAAACAGAACACTGAAAAGTTCCGCCGGCGGATTAGAGAGTGGTGGGCCCGCATTCCAGCCGCTCCTGTGCAGATGATCAAACCCAACGAAAGCAAGAAAAAGAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005971