BGIOSGA005972

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Revision as of 02:31, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005972| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005972, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA005972

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005972, complete gene.

LocusTag

OSJNBA0014E22.22-2

Ensembl Transcript ID

BGIOSGA005972-TA

Ensembl Protein ID

BGIOSGA005972-PA

Length

2603

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27287344..27289946

Sequence Coding Region

27289904..27289946,27289668..27289804,27289536..27289582,27289110..27289432,27288849..27288931
,27288689..27288764,27288548..27288609,27288050..27288145,27287805..27287966
,27287344..27287460

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27287344..27289946 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27287344..27289946 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGGCGTCGTCTCCGGCGGCGGCCATCACCTGCCGAGCGGCGGTGGCGTGGGCGCCCGGTCAGGCGCTGGTGATGGAGGAGGTGGAGGTGGCGCCGCCGGAGGCCATGGAGATCCGCGTCAAGGTCGTCTCCACCTCCATCTGCCGCAGTGACGTCACCCAGTGGCAATCCACGGCTCAAACCGATCTGTTCCCCAGAATTTTCGGGCACGAAGCATCCGGTGTGGTTGAGAGTGTTGGTGAAGGTGTGACCGAGTTCGAAGTGGGAGACCATGTGCTCACCGTCTTCATCGGAGAGTGCATGAGCTGCAAGCACTGCGTTTCAGGGAAGAGCAACATGTGCCAGAAGCTCGGCCTGGAGAGGAGGGGTGTCATGCACAGCGATCAGAAGACCCGCTTCTCGCTCAGGGGGAAACCTGTGTACCATTACTGTGCAGTGTCAAGCTTCAGCGAGTACACGGTTGTGCACTCCGGTTGCGCGGTGAAGGTCGGCCCAACCGTGCCGATGGACAGGATATGCCTGCTGAGCTGTGGTGTATCTGCAGGGCTTGGTGCAGCCTGGAAGGTTGCTGATATCTCGAAGGGGTCGAGTGTGGTTATATTTGGCCTTGGAACTGTAGGGCTTTCTGTTGCTCAAGGTGCTAAGCTGCGCAGGGCTTCTATAATTATCGGTGTTGATACTAATCCTGAAAAGCAAGAAAAGGGGAAAGCTTTTGGTGTCACAGATTTTATTAATCCAGAAGAATTGAATGAACCTGTTCAGCAGGTGGTGAAGCGGCTGACCAATGGAGGTGCAGATTACTCTTTTGAGTGCGTGGGTGATACAGGAGTAGTGTCGACTGCACTGCAATCATGTTCTGATGGTTGGGGGCTGACTGTAACTCTTGGTGTGCCAAAAGCAAAGCCAGAGGTTTCTGCTCATTATGCACTACTTCTGTCTGGAAGAACATTGAAGGGGTCTTTGTTTGGAGGATGGAGACCTAAATCTGATCTACCTTTGTTAGTGGACAAGTATGCAAACAAGGAAATCCAAGTCGATGACCTTGTTACACATGATTTGTCATTCGATGACATCAACAAGGCACTTGAACTGATGCTAGAAAACAAGTGTTTGCGATGTGTGATTCACATGCCTCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAASSPAAAITCRAAVAWAPGQALVMEEVEVAPPEAMEIRVKVVSTSICRSDVTQWQSTAQTDLFPRIFGHEASGVVESVGEGVTEFEVGDHVLTVFIGECMSCKHCVSGKSNMCQKLGLERRGVMHSDQKTRFSLRGKPVYHYCAVSSFSEYTVVHSGCAVKVGPTVPMDRICLLSCGVSAGLGAAWKVADISKGSSVVIFGLGTVGLSVAQGAKLRRASIIIGVDTNPEKQEKGKAFGVTDFINPEELNEPVQQVVKRLTNGGADYSFECVGDTGVVSTALQSCSDGWGLTVTLGVPKAKPEVSAHYALLLSGRTLKGSLFGGWRPKSDLPLLVDKYANKEIQVDDLVTHDLSFDDINKALELMLENKCLRCVIHMPQ</aaseq>

Gene Sequence

<dnaseqindica>1..43#143..279#365..411#515..837#1016..1098#1183..1258#1338..1399#1802..1897#1981..2142#2487..2603#ATGGCCGCGGCGTCGTCTCCGGCGGCGGCCATCACCTGCCGAGGTACGTACGAGCCCCCCCTCGGCCGAGTTACTCCCTGCTCCGTTGCGTGGTTTTGTGGTGGTGATTTTGGTGGATGGGATATGCCTGCGTTGCGTGCAGCGGCGGTGGCGTGGGCGCCCGGTCAGGCGCTGGTGATGGAGGAGGTGGAGGTGGCGCCGCCGGAGGCCATGGAGATCCGCGTCAAGGTCGTCTCCACCTCCATCTGCCGCAGTGACGTCACCCAGTGGCAATCCACGGTACGCCGGCCTCTCTAGCTCTGCTTCCATCCAGCCCGATACTCCTGATGCGCTCATCGATTTTGCTGCTGTTTCCGAAACGCAGGCTCAAACCGATCTGTTCCCCAGAATTTTCGGGCACGAAGCATCCGGGTCTGTATAGTCTATATATACTGATCTTGCAGTCTCTTTTGCTGTTGCCGCCATGTCTCGCAAGTTGCTCGGAACACTGACATTGGAACGATCTGATGTGTAGTGTGGTTGAGAGTGTTGGTGAAGGTGTGACCGAGTTCGAAGTGGGAGACCATGTGCTCACCGTCTTCATCGGAGAGTGCATGAGCTGCAAGCACTGCGTTTCAGGGAAGAGCAACATGTGCCAGAAGCTCGGCCTGGAGAGGAGGGGTGTCATGCACAGCGATCAGAAGACCCGCTTCTCGCTCAGGGGGAAACCTGTGTACCATTACTGTGCAGTGTCAAGCTTCAGCGAGTACACGGTTGTGCACTCCGGTTGCGCGGTGAAGGTCGGCCCAACCGTGCCGATGGACAGGATATGCCTGCTGAGCTGTGGTGTATCTGCAGGTGAATTTTAAGGGCTCAGATGGCATCAGTGTTTTTACTTTATCTTCCACGCCTTTCTGTAGCTTATACTTGGTTTACTGATGCTAAGAATTAGGTGTGCTATGTTGTTCTGCACTTCTGCGCATTTTAACCGTGTCTCTGATCATTCATGTCTTCGTTCATTTTTGTATTTCACTAGGGCTTGGTGCAGCCTGGAAGGTTGCTGATATCTCGAAGGGGTCGAGTGTGGTTATATTTGGCCTTGGAACTGTAGGGCTTTCTGTAAGTTTCTACAGAGGCTATGCTATTAGTTAATGAAAGCATATTAGGAAATGTAATATTTATACTCATATCTTCCTGACTTAGGTTGCTCAAGGTGCTAAGCTGCGCAGGGCTTCTATAATTATCGGTGTTGATACTAATCCTGAAAAGCAAGAAAAGGGTATTTTGCAAACTTGCAATTTCAATCTAAACTTCAATTATGACTTTTTCCCATATACTTACTTTTGTTCATGGCACAGGGAAAGCTTTTGGTGTCACAGATTTTATTAATCCAGAAGAATTGAATGAACCTGTTCAGCAGGTACATCATCATGTTTGCTGAGAAAACTGAACTGCTGATCACTCGCAGTTTACAATTTTATCTAAACTGCATATTTGGTGTTGGTATTCCTTTTGCACAAACTGTTGTGCTAAATCATAGATTGTGAACTAGAAATGGAATCGTGATAAATAAATCAAGACCTTAGAAGTCATTTGTTCAGGCCTTAAATAGTAGGATTAGAATATGGCACTGTGTTGAACAGACAGATTTTGAATACATGCTTTTGCCAGTACGCTCTTATAATTACATGTTTCATGACCCAATTTTTGAGGGAAAATAAGTCAACAGCTCCTGTTGCACTGGTGTCCAATTGGTAGTTTCTAAAATCTTGATCATATCCCTGATATACACAGCATAAAGACATTGTTTTCATGCTTTCAGGTGGTGAAGCGGCTGACCAATGGAGGTGCAGATTACTCTTTTGAGTGCGTGGGTGATACAGGAGTAGTGTCGACTGCACTGCAATCATGTTCTGATGTAATTTTTATTCCTTTCCATTGCACTACAATTCCACCTATTCTGCCCAGATATATTATCTTCTCATGTTTTGGTCTTCTTAGGGTTGGGGGCTGACTGTAACTCTTGGTGTGCCAAAAGCAAAGCCAGAGGTTTCTGCTCATTATGCACTACTTCTGTCTGGAAGAACATTGAAGGGGTCTTTGTTTGGAGGATGGAGACCTAAATCTGATCTACCTTTGTTAGTGGACAAGTATGCAAACAAGGTACGGAGACAATGTGTTGTAGAAGCAAACATCCTAATAAAACTGAATTCTATTTTCAGTTAAAAATATTAAATTAAGAAGCTGAACTTCATCATATGTAATTGTGTGAATGGATTATCCTTTACTGTGGTGCGAAGTGGTTATCACAATCGAACATAATAGCATTTATGTACAAGATGTCATATTTGATGTTTGGTCAATGATCACATAGCAATATATTTAGTTAATGTGACACATACAAAAAATACCTTGTTTGTTTTTCCAATATATAGGTCTTTCACCTTTTCTGATATCAAATATTGTTTGGGTAGAATGTTGACTGATATCATGTTACTTCTTCTCAGGAAATCCAAGTCGATGACCTTGTTACACATGATTTGTCATTCGATGACATCAACAAGGCACTTGAACTGATGCTAGAAAACAAGTGTTTGCGATGTGTGATTCACATGCCTCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005972

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005972&oldid=59524"