BGIOSGA006004

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Revision as of 02:32, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006004| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006004, complete gene.| tag = OsI_081...")
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Gene Name

BGIOSGA006004

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006004, complete gene.

LocusTag

OsI_08139

Ensembl Transcript ID

BGIOSGA006004-TA

Ensembl Protein ID

BGIOSGA006004-PA

Length

5490

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26693433..26698922

Sequence Coding Region

26698840..26698922,26698150..26698203,26697953..26697999,26697832..26697863,26697641..26697742
,26697457..26697524,26696168..26696244,26695541..26695638,26695400..26695471
,26694885..26695007,26694023..26694083,26693433..26693575

Genome Context

<gbrowseImage1> name=IndicaChromosome02:26693433..26698922 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:26693433..26698922 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCGAGGGCGTGCTCCTGGGGATGGGCAACCCCCTCCTCGACATCTCCGCCGTCGTCGACGACGCCTTCCTCACCAAGTATGACGTCAAGCTGAACAATGCAATTCTCGCTGAGGAAAAGCACTTGCCTATGTATGATGAGTTGGCCAGCAAGGGCAATGTTGAATATATTGCCGGAGGAGCCACCCAGAACTCTATCAGGGTTGCTCAATGGATGCTTCAAACTCCTGGTGCAACAAGTTACATGGGTTGCATTGGAAAGGATAAGTTTGGTGAGGAGATGAAGAAGAATGCCCAAGCTGCTGGTGTTACTGCTCATTACTACGAGGATGAGGCTGCTCCCACGGGCACATGTGCTGTCTGTGTTGTTGGTGGTGAAAGATCACTGGTTGCAAACTTATCAGCAGCAAACTGCTACAAATCTGAGCATCTGAAGAAACCGGAGAACTGGGCACTAGTGGAGAAAGCAAAATACATCTACATTGCTGGCTTTTTCCTTACGGTCTCCCCAGATTCTATTCAGCTTGTTGCTGAGCATGCTGCCGCTAACAACAAGGTGTTCCTGATGAACCTCTCTGCACCCTTTATCTGTGAGTTTTTCCGTGATGCCCCAGGAGAAGTTCTTGCCACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCTCTGGAAAACAAAAGAGGATTGCCGTGATTACTCAAGGTGCTGATCCAGTAGTTGTCGCTGAGGATGGACAGGTGAAAACATTCCCTGTGATCCTACTGCCAAAGGAGAAGCTTGTTGACACCAACGGCGCTGGTGATGCCTTTGTTGGAGGCTTCCTCTCACAATTGGTTCAACAAAAGAGCATTGAGGACTCTGTGAAGGCTGGTTGCTATGCCGCAAATGTTATCATCCAGCGTTCTGGCTGCACTTACCCTGAGAAGCCTGATTTCAACTAG</cdnaseq>

Protein Sequence

<aaseq>MASEGVLLGMGNPLLDISAVVDDAFLTKYDVKLNNAILAEEKHLPMYDELASKGNVEYIAGGATQNSIRVAQWMLQTPGATSYMGCIGKDKFGEEMKKNAQAAGVTAHYYEDEAAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYIYIAGFFLTVSPDSIQLVAEHAAANNKVFLMNLSAPFICEFFRDAPGEVLATENVEEIALKISQLPLASGKQKRIAVITQGADPVVVAEDGQVKTFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQQKSIEDSVKAGCYAANVIIQRSGCTYPEKPDFN</aaseq>

Gene Sequence

<dnaseqindica>1..83#720..773#924..970#1060..1091#1181..1282#1399..1466#2679..2755#3285..3382#3452..3523#3916..4038#4840..4900#5348..5490#ATGGCGTCCGAGGGCGTGCTCCTGGGGATGGGCAACCCCCTCCTCGACATCTCCGCCGTCGTCGACGACGCCTTCCTCACCAAGTACGCGCGCGCTCGTCTCCTCCTGCTCCTTAGTCCTGATCTACCGCTGATCCCTTTTTTTTTTTTTGCCTTTTCGTTTTGCGTTCGTTTGGATCCGAATGGTTTGGTGGTCTTTTGTCGCGTCGGCTCGTCAGATCCGAGGCGACAAAAATGCTTTGTGGTCTAGTAAGTTAATCCCAGATGCAAGCAGCACGGGACCAAAAGTAAAAAAAAAAACTGATCAGGAGAGAAGTGCCAGCACCAGCGGATCGACGTGATATATGAGAAATTTTACATAATATACTGATCAGTAGAACTCCAATTTCACGTGGCATAGATGTACTCCGCTTGTTTTCGAGTGTGTACGCTGAAGTTAGCGCTTGTTTAATATACTCCGCTTATTTTTTTGGCATAGATCTTCAAATTTGGAGTCTGACAAGTAGTGTGTACGCTGAAGTTAGCGCTTGTTTAATATACTCCGCTTGTGTTTTTTTGGCATAGTTCTCCAAATTTGGAGTCTGACAAGTAGTGTGTACGCTCAAGTTAGCGCTTGACTTGTTTACTGCTTTAATGATATGCTGGAGTACATGATTATTTATGTTGCTTATTATGGTGTCATCACGGTTGGCAATCTGACGTGCTTCTCCAATGTTTTAGGTATGACGTCAAGCTGAACAATGCAATTCTCGCTGAGGAAAAGCACTTGCCTATGTAAGTATTTATATTAGTATCACCCTTAAATATTCTATTGTCATTATTATGCATGTGTTTGAGCCGCTTCCATTTTTAATTATACTGGTAGAGTTGTAGTTTCCTCTTCTTTAAACTGCTACTTAATAATCCACTCTTTTTACTTTGCAGGTATGATGAGTTGGCCAGCAAGGGCAATGTTGAATATATTGCCGGAGGTAACGCTTTGTCTTGAACCTGAGCTTACAATATGGTTCATATTGGTGAATCTTTTGATTGTCTAATCTTCATTGTTCTCTTCTTCCAGGAGCCACCCAGAACTCTATCAGGGTTGCTCAAGTAAGCTCTGAATCCACTAAAACCATGAGCAAGAGCAACAAAAACCTGTATATATACTTTTTTGCTTACTGTATGCCATTGCTTTGCAGTGGATGCTTCAAACTCCTGGTGCAACAAGTTACATGGGTTGCATTGGAAAGGATAAGTTTGGTGAGGAGATGAAGAAGAATGCCCAAGCTGCTGGTGTTACTGTTAGTTCTAAATCTCTCTCTCTCTCTTTTTTTTTCATGGCATCTGATGCAATAATATCCTACAGTGGCTTGTCAACTAACTAAGGTGGTCTTGCTCTTGACACACGCTCGGTTAGGCTCATTACTACGAGGATGAGGCTGCTCCCACGGGCACATGTGCTGTCTGTGTTGTTGGTGGTGAAAGGTCCGTCATCTCTATTACCCCTCCCGGCCTTACTGGTTATTTGTATCTGCCACTTATAAACTTACGATTTACATTATCCTTACTCATAAGGAAGATTATGCCACAATTTCGATCATTTGTGCTTATTTTTATTTTTTCACTTCCTCTTTTGCCAAAATCTTTTTTATGTTGCAGCACTACCATTGTCCATAATTTGTATATTATTTTTGTAGCAAATGAATGTTGGAACAGCACTTGCAACAGTGCTAATATTTCCATAAATAAAGTAGATCTGACTGCATTCTTCTCTGTGTCTTATTTCTTCTGTTGGCTATGTATAGCTCATGGATATTTTGGTCATATTCCACAGTTGCATGCTACTCCTACGTAGGTTGCATTAGGCACTAGGGAGTCATGCTTTACCAAATTTGTGCATGTAATACTTAATTTGATTTAAACTAGACATAACTCCCTCCATTCCAAAATATAAGCATTTCTATGTTCTTTAGCAAAATCTAAGGTAGAGAGAAATGATTCTCCTTTACTCACTTTAGTGATCAAATTTTGAATTGCTTAGACTCCCTTCCCAAGTATCTCAGTGGCTGAAAATGTATAGATTTCTGTGCATTGGAATCAATGCCTCCGAAATGCTTATATTGGGGGTACAAAGTTTGAATCCACAAGAGATGCTTATATTTTGGAATGGAGGGAATATCAATCTGCCACACAGTGTTTGCCTGTATGGTCTATAATGGAACTAATTATGAGACATGCTATGTTCGTTTATAAGTGTTATCATAGTACTCCCTCCATCTACTTTTGATAGGCATATTTCCAAATCTGAAAAAAAATACTTTTGATAGGCATATTTCAATCCAACCACCTATCCTCTTAATGACTTTCTCGGATTTAATGCGTGACTCTTCATTCTACCACACAAGATTGGCTACTTGGGCATCGAGAAATGTAAATATTAATGAATCACTTGTTTACGAGGAATAACTAGTAGCATGTTTAAATGAATGATAAGTAGAATTACTTATCCTTATGAAATATGACTATCAAAAGTAGATGAAGGGAGTAATTTATTATAGTTTATGCCTGTCATAAGTGTTGTTATCTTCATACATCTTGATTTCAAGCTGATTTCGTACTATGTCCGTTCTCAATATTTCGTCAGCACCTTTTTCTTTAACAATATCTGATGTTTAGCTATTTATCTGTCTGTACCAGATCACTGGTTGCAAACTTATCAGCAGCAAACTGCTACAAATCTGAGCATCTGAAGAAACCGGAGAACTGGGCACTAGGTAATTTATTGAGATATTCTGAGCTTTTTGCCACCACATATTTCATCACTTAATTTGGGGGATTTTTGTGCATATCAGCTGCATTAATTGTGCAAACTCTTGGGTTTGAGACTTGTGAGTTGCTCACTATGTATGCAAACTGTACATACTTTTCTGTTAATTTGTAGCCTCTGAGACCTGAACATGCTTTACTGACTTTGAAGAACAATGCGGCCTAATTACCAGCTCATGTTAACTTTGTTTTCTGCATGTTTTGGTAATCTGTTAGATTGTTTGTGGACTTGACAAAAGAAGTAATGTTCCTATATTTTGAAACATGCATGCGCTTGTCAGTTGACTGTTGTCATGAATTTTAGTATAACCATTTGGGTGTCAGAAACTCAGAATCCACATTTTTCTGAGAAGTACTGTTGCCACAACCTTACCTTGTGCGGCACTGTTAGACTTTTTCATCGAGTTCATCAAACTTCATTCATTTTAAATGGGGAAATGGTTATTGTCCTGATGAATATGGCGTTGTTGTCGACAGTGGAGAAAGCAAAATACATCTACATTGCTGGCTTTTTCCTTACGGTCTCCCCAGATTCTATTCAGCTTGTTGCTGAGCATGCTGCCGCTAACAACAAGGTAAATTCTATCACTAAAGAGTTCCCTTTGAAGTGGTTTTTAGAGTTTGACTAACCGTGTTGTTTTCAGGTGTTCCTGATGAACCTCTCTGCACCCTTTATCTGTGAGTTTTTCCGTGATGCCCCAGGAGAAGTTCTTGCCGTAAGTGATATCTTCTCTGCTGGCAATGCTTATATTTTTAACTTTATGTGGAACCACATGCTTTGACCCACAATACATAAAGCAACGTCCATTCATGTTTTGTGAAGACACTTCCCTGTGCTTGGCATGTGCCAATCTTTTAGCCAGTTATAGTTCTGTCATGTCATTGAGGGCTTTCTGTTATCTCTGTTCATTCATTATATTGATTTATGGTCATGTTGAAGGTAGCCACTTGCTACTAATGTAGGTTTGTGGACTACATCTTCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGGTAACTATTCATCTCTCTTCTTTAGACATTCTTTTCTGGTGATTGCGCAGCTGACAAATTACCTGTATAAATTTGTAGACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCTCTGGAAAACAAAAGAGGATTGCCGTGATTACTCAAGGTGCTGATCCAGTAGTTGTCGCTGAGGATGGACAGGTATGCATCTCTGATATTAACTTTCAAATTGCATTTTCATCATACAGTTTATCCACAGAAGCAAACTGATCTTTGAATTGAACTGCTAGTTTCATAGTAAAAATATATGATTTTTTTTTGTTTCACTTTCTCCAATGGAAAAATTATTCTTCTTTTCGTTTATTTTTTTTGGGGTGAATGCAATTCATGCTTACGTTTTGCAACAAGTTTGGCTTTGAGCTTATGGTTCTATGCTAAAACCTTGTATGCACATTGGGAAAACAAATTGTCTCTTTAACAGTTATTTCTTGGTCAAATATGTCCATTTATCTTAGGGAACATAATCCTGTGCACACAAGCTTCCCGTGCACACTCCGTGTATTACAGAAAATTCTAGTAAAAATTCGACACATACTTCCAATAGTATTACACCTACATGTGAAATCTTATCTTCAAATTCATTATATTTTAGCCGTAGCAAAAAAGACAAAATTATGACAGATTTTTACTCTTAAAACTGTCAGATTTTTCACTTTTTTGTTACGGCTAAAATATAATGAATTTGAATGAGGCTTTGTAGATATGTGTAATACTATTAGGAGTAAATGTTCAATTTTTTATAGAACTTTTCATGACATTTGGTAATTGGTGTGCACGGAGTGTGTACGGGAAGCTTGTGTGCATAGGATATGTTCCCTTTTGTCTTTTGCCGTTTTCTTCAAATAAAGAATCAAACATCTATCATTTTGAGCATTCAAAAACATTCTGGGATATAGTGCAAGTATGATATGATTTATGCTGAGCCTATTATGTTGCTGATAGGTGAAAACATTCCCTGTGATCCTACTGCCAAAGGAGAAGCTTGTTGACACCAACGGCGCTGGTAATATTTCTTTTATAGCATTGAATTGATATTTATTTCTGGCATTTCCTTAAAAAACTCAATATTTTACAAGAATCTTACTCAGCCAGTCAGTATTATTAACATACTACTATAGTCCTAGGATAACTATGCTCTCGTCTACCTTAACTCTAACAGCAAAGCCACCTGAACTAATTCTGAGTGAGGACTCCCATATTTAAGACAGTTTGGCACAAAGATGTTTTAAGGAATATTCGCCATGATGCCAACTGCATAGTATACATCTTGAAGTTTGGATAATGCCAACTGCATAGTATACACATTGAGCTTCTGTCTTTGGTAACACGCAAACACTGTTAAAAAGCTCTGATGTTTAAGAAACAAGTTAATAAACTCTGGAGGCTGTCTGATAAGTTCCTATTCATTTTGTCTACTGTTCCTGATAAGCTACCCTCCCTTTATTCTTAGGTGATGCCTTTGTTGGAGGCTTCCTCTCACAATTGGTTCAACAAAAGAGCATTGAGGACTCTGTGAAGGCTGGTTGCTATGCCGCAAATGTTATCATCCAGCGTTCTGGCTGCACTTACCCTGAGAAGCCTGATTTCAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006004

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006004&oldid=59556"