BGIOSGA006020

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Revision as of 02:32, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006020| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006020, complete gene.| tag = OJ1372_...")
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Gene Name

BGIOSGA006020

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006020, complete gene.

LocusTag

OJ1372_D06.35

Ensembl Transcript ID

BGIOSGA006020-TA

Ensembl Protein ID

BGIOSGA006020-PA

Length

5664

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26460372..26466035

Sequence Coding Region

26465976..26466035,26465502..26465725,26465123..26465355,26462378..26462597,26461846..26462227
,26461651..26461758,26461156..26461356,26460952..26461050,26460624..26460794
,26460372..26460533

Genome Context

<gbrowseImage1> name=IndicaChromosome02:26460372..26466035 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:26460372..26466035 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCAGGCCGGGCCCTTTGACCGAATGGCCGTGGCATAGGCTGGGGAACTTCAAGTACGTGGTGATGGCCCCCGTGGTGGCGCACGGCGCGCGCCGGGTGATGCGCAACGGGTGGGGCGACCTCGACATCGCCTTCTCCCTCATCCTGCCGTCGCTGCTGCTGCGGATGATCCACAACCAGATCTGGATCAGCCTCTCCCGCTACCAGACCGCCCGCAGCAAGCACCGCATCGTCGACCGCGGCATCGAGTTCGACCAGGTCGACCGCGAGCGAGGCTGGGATGACCAGATCCTGTTCAATGGGTTGGTGTTCTACGCGGGGTACCTGGCGATGCCGAGCGTGAGGCGGATGCCGGTGTGGAGGACGGACGGCGCCGTGGTGACGGCGCTGGTGCACACGGGCCCCGTCGAGTTCCTCTACTACTGGTTTCACCGCGCGCTGCACCACCACTTCCTCTACTCCCGCTACCACTCCCACCACCACGCCTCCATCGTCACCGAGCCCATCACCTCTGTTATTCATCCTTTTGCTGAACATGTGGTCTATTTCATACTGTTTGCAATCCCCATACTGTCAACAATTTATTTGGGAAATGTTTCGGCCATGGGCATTGTGGGGTACATTGCTTACATTGACTTCATGAACAACATGGGACACTGCAATTTTGAGTTGGTGCCAGAGTGGATTTTCCAAATCTTTCCACCCCTTAAGTATCTGATCTACACCCCATCGTTCCATTCTCTTCATCATACGCAGTTCCGCACAAACTACTCGCTATTCATGCCATTTTATGACTACATATATAACACCATGGACAAGTCATCTGATGAGCTGTATGAAAGCTCACTGAAAGGAACGGAAGAAACACCTGACCTTGTTCATCTCACGCATATGACCAACTTGCAATCAGCCTATCATCTAAGGATAGGAATTGCATCCATAGCCTCCAAACCGTACAGTGACTCTGCGTGGTACATGTGGACGTTATGGCCCTTGGCATGGCTGTCAATGGTACTAGCATGGATTTATGGGTCCTCAGCATTTGTCGTTGAGAGAATTAAACTAAACAAGATGAAGATGCAAACATGGGCAATACCAAGATACAACTTCCAATATGGCCTTACGTGGGAGAGAGAACCAATCAACGACTTAATTGAAAAGGCAATATTGGATGCTGATATGAAAGGGGTTAAAGTGATTAGTCTAGGACTACTGAATCAGGCAAAACAGCTCAATGGAAACGGTGAACTATTTAGACAGAAGTATCCAAAATTAGGAGTTCGAATTGTCGACGGAAGTGGCTTAGCTACTGCAGTGGTGCTAAAAAGTATTCCTTCAGATGCAAAGAAAGTTTTTCTTCGTACAGGCACTTCAAAGATAGCTCGTGCCATTGCCATTGCACTATGTGACAGAGGTGTCCAGGTGATCATGAATGAAAAGGAGGTATACCACATGCTCAAGTCACAAATACCAGAGAACAGGGCAAGCTATTTGAAACTCTCGAGCGACAACGTACCTCAGCTTTGGATAGTACACAATATTGACGACAACGAGCAAAAGATGGCGCCAAAAGGAACAATTTTTATTCCCATATCACAGTTCCCCCTTAAGAAACTTCGCAAGGACTGCACTTACATGAGCACCCCAGCAATGAGGATCCCGGAGGAAATGAAGAACATCCACTCCTGCGAGAATTGGCTTCCAAGAAGGGTGATGAGTGCTTGGCACATTGCTGGAATACTTCATGCTCTGGAAGGATGGAACATGCACGAGTGTGGGGATGAGATGATGGATATTGAGAAATCATGGTCAGCTGCCATTCGGCATGGATTCCTTCCTCTCACTAAAGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MATRPGPLTEWPWHRLGNFKYVVMAPVVAHGARRVMRNGWGDLDIAFSLILPSLLLRMIHNQIWISLSRYQTARSKHRIVDRGIEFDQVDRERGWDDQILFNGLVFYAGYLAMPSVRRMPVWRTDGAVVTALVHTGPVEFLYYWFHRALHHHFLYSRYHSHHHASIVTEPITSVIHPFAEHVVYFILFAIPILSTIYLGNVSAMGIVGYIAYIDFMNNMGHCNFELVPEWIFQIFPPLKYLIYTPSFHSLHHTQFRTNYSLFMPFYDYIYNTMDKSSDELYESSLKGTEETPDLVHLTHMTNLQSAYHLRIGIASIASKPYSDSAWYMWTLWPLAWLSMVLAWIYGSSAFVVERIKLNKMKMQTWAIPRYNFQYGLTWEREPINDLIEKAILDADMKGVKVISLGLLNQAKQLNGNGELFRQKYPKLGVRIVDGSGLATAVVLKSIPSDAKKVFLRTGTSKIARAIAIALCDRGVQVIMNEKEVYHMLKSQIPENRASYLKLSSDNVPQLWIVHNIDDNEQKMAPKGTIFIPISQFPLKKLRKDCTYMSTPAMRIPEEMKNIHSCENWLPRRVMSAWHIAGILHALEGWNMHECGDEMMDIEKSWSAAIRHGFLPLTKA</aaseq>

Gene Sequence

<dnaseqindica>1..60#311..534#681..913#3439..3658#3809..4190#4278..4385#4680..4880#4986..5084#5242..5412#5503..5664#ATGGCGACCAGGCCGGGCCCTTTGACCGAATGGCCGTGGCATAGGCTGGGGAACTTCAAGGTACACGCCCAAATTCTCACCTTCTGATTTCTGAGCGAAGAAAACATGTTCATCCTTTTTCCTTGCTCCCCCGTTCGTTCCTCTTGATGAACTTCAACAGATGCAGTTGTTTGCATACAGTAAATGGCCAGCCAAATCCAAACCTTAAAATTGCACATCCCAGTACATGCATGCAGTTTCCTAAAAAAGATGATTAGATTCTCGGCTAGTAGCTTTGTTTGACATGCATGGCATGGGGTGGCATGCGCAGTACGTGGTGATGGCCCCCGTGGTGGCGCACGGCGCGCGCCGGGTGATGCGCAACGGGTGGGGCGACCTCGACATCGCCTTCTCCCTCATCCTGCCGTCGCTGCTGCTGCGGATGATCCACAACCAGATCTGGATCAGCCTCTCCCGCTACCAGACCGCCCGCAGCAAGCACCGCATCGTCGACCGCGGCATCGAGTTCGACCAGGTCGACCGCGAGCGAGGCTGGTCAGTCACCTCAACACGCACACGCACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAGCTGCTACCACCACTGTATATATTCGTGCTGATTTGCGTTGCGTGCTGCAGGGATGACCAGATCCTGTTCAATGGGTTGGTGTTCTACGCGGGGTACCTGGCGATGCCGAGCGTGAGGCGGATGCCGGTGTGGAGGACGGACGGCGCCGTGGTGACGGCGCTGGTGCACACGGGCCCCGTCGAGTTCCTCTACTACTGGTTTCACCGCGCGCTGCACCACCACTTCCTCTACTCCCGCTACCACTCCCACCACCACGCCTCCATCGTCACCGAGCCCATCACCTGTAAGCCACACGACTTAAAGGCTGTGTTTCTTTACTCAATATTCTCAACTTCATCCTCCTTCTTTTCTGCTTATCAATCTATTAAAAAATACTTTTATATGAAAAGTTTTCTATAGAAAAGTTTTTTTTTAAAAATCACATTAATCTGTTTTTTTAAAAATAATTAACCTTAATTTATCATTTGCTAATAAGTGGCTTTGTTTCACATGCATCAGTCATGAGTTCACACAACTCATAGCAGCTCATCTCACTTCGTTAGTTTTTGTTTGATGCCTTATCATCTCATGGGTGTTCATTTAATTAACTTGTTAGTACCGTACCGTGTCTCACTGTTCAGTCTAATAATTGTTATATATAGTTGATTGCGTTCTTAGATTAATGAAGTGCGCAGATCATAAATAGTAAGCACAAAGTGGCCGATATGGGCTCCTCTCGTTTGTTTAAACTTTTTGTCACTTGCCGGAGATGCCATGCCCTACATTCCTAGTATGTTCTCGAGTTAAAATATGATGAAGTAGCAGTTGCACTCCTCGGAATAACACATTCTTAGATAATTAAAGAATTCGTCGTAGCTAAGAACAACACACATGAAAGTAAAGAATGACCAGCAGGATGCAGGAATCGAATTGAAGACACTGTACGGAGTATTAATTTCAGACCAACAGCTCATCTTCTACCAGAAAAAAAAATCACAAATGTTCTGCCAACATCATTTATGTTCTCTGATCCATGAACAGTACCACAGTATCTTTTTTTTTTTTTTGCAATGCACCTTTTCATGACAAAAGAAGAAAAAGAACACCTACGGGACGGGATTGTGATATGTCCAGTCTGAGGCTCTGAGCTTCACACTGTGTCACTGTCGTAGAGTAAACGGCATAAATTGGCTGTACCTGCTAGGCAGAGAGAGAGAGGCCCGTCCAGCCTGCAAGAAATGAGAAATGCATGTGACTTTCTGAATTGCAGCGCTGATGTGTTCGATTCAGTTTAGGACCACTCCCGGTGCAGGCCAATAGTAGGAGTATTACCTTTCCTTACCAATTTGACCGATAAATGCTGGAAAGAGCGGCCGGTATACTCCTATTGACATTTCACATGGCATTTGCAGAGCTTCAGTGATGATGGGTGAACAGCCTACAGTTTACAGCACAGAGCCTGTAGTTTACAGTACAGAGAGTGCCCAATAAAACGAGACATAAATATTGCGGCTTGCAGAAAATGCAGTTTGGACCACCTCCACAATCTTCTGATCTAGATAGAGCTGTTGCTATTACTGATACTGAATGGAAAACTGAAAACAAACATAGGTTAAGGGTGTGTTTAGTTCACGCCAAAATTGAAAGTTTGATTGACATTGGAACGATGTAACGGAAAAGTTGGAAGTTTATGGGCCTGTTCACTTTGATGCCAAAAAACACCTTACCAAATTTTGGCAATGACAAAATTTTGTCATAGTTGCCAAAATTTTGGTAACTTGCCAAAATTTTGGCAGGATTTTTTATATAGTTACCAAAATTTGGCAGTAAACTAAATGTAGCCACTTTTTTGGCAACTTTACTAAAACTTGGTAAGGTTGAAAATGACATTAAAGTGAACAGGCCCTATATGTGTAAAAAAGTTTTGATGTGATGTAAAAGTTGAAAGTTTGAAGAAAAAATTTGGAACTAAACTTGGTCTTAGGCCGAGTTTAGTTCCAAACTTGCAACTTTTCCGTCACATCAAATGTTTGGACATCTACATAGAGCATTAAATGTGGACGAAAAAAAACAATTGCACAGTTTGCATGTAAATCGCGAGACGAATCTTTTGAGCCTAATTACGCCATGATTTGACAATGTGGTGCTACAGTAAGCATTTGCTAATGACGGATTAATTAGGCTTAATAGATTCGTCTTGTAGTTTAAGGCGGAATCTGTAATTTGTTTTGTTATTAGTCTACGTTTAATACTTTAAATGTGTGTCCGTATACTTCAAAAAATTTTGGCACACGAACTAAACACAGCCTAAGTAGAGTACTTCTTCCGTCCTTCAATGACTTTTTTTAAACAAAGTTAATAAATTAGTAATAAGGGTAAAAGATCGAAGTGCTCCTCATTAATAAGAAAGTAGTATTGTTAGTGATAGTTAGGGGTATTGGGATACAAAATCTTAATTCACGGACGGAGGGTAGGTAAGAAAGTTAAAATAAGTCTTTTATGGGCAAGGTTGAAAGACTAGAAATGAAATCCTTTTAGGACAAAGGGAGTAGTTTTTATCAAACGTTGGCAAATACAGGTCCTACAAGTAGAACAATTCGAAAGGGATTGATCGACTATTATAGTTGCTTTCTAAGTACAAGAAAAGATCATATATCTGGGAGGAGGCTATTACCTGAAATTGAACGAGGTGTTTTAGCTATAAAACATCAGTGTGATGTTCATGCATAGGTACTGTTGTTTTTTTAGAAAGCACATATATAAGAGTATGTACCTACCCTGTTAATGCACAATTACTATTGGCACTTACAACAATTTTATACATTGCAGCTGTTATTCATCCTTTTGCTGAACATGTGGTCTATTTCATACTGTTTGCAATCCCCATACTGTCAACAATTTATTTGGGAAATGTTTCGGCCATGGGCATTGTGGGGTACATTGCTTACATTGACTTCATGAACAACATGGGACACTGCAATTTTGAGTTGGTGCCAGAGTGGATTTTCCAAATCTTTCCACCCCTTAAGTATCTGATCTACACCCCATCGTAAGTGCAACACTCTTCTCTCATGTATCTGTCATAGAAATGTATTACCAACGTGTGACAGATTGGATCACTGAATTCACATAACTTGAAGTTCAGCCTCGTGAGTTCATAAACCCAATGCTAACAAACAAATGCTATTTCCTTCTGCAGGTTCCATTCTCTTCATCATACGCAGTTCCGCACAAACTACTCGCTATTCATGCCATTTTATGACTACATATATAACACCATGGACAAGTCATCTGATGAGCTGTATGAAAGCTCACTGAAAGGAACGGAAGAAACACCTGACCTTGTTCATCTCACGCATATGACCAACTTGCAATCAGCCTATCATCTAAGGATAGGAATTGCATCCATAGCCTCCAAACCGTACAGTGACTCTGCGTGGTACATGTGGACGTTATGGCCCTTGGCATGGCTGTCAATGGTACTAGCATGGATTTATGGGTCCTCAGCATTTGTCGTTGAGAGAATTAAACTAAACAAGATGAAGATGCAAACATGGGCAATACCAAGATACAACTTCCAAGTAATCACTTCCCCTCGCTTATGCATTTCTAAATTCAAAGGTATGGATTATGGAAGATACTAACTGTTCTGGTTTTGCACTCTGCAGTATGGCCTTACGTGGGAGAGAGAACCAATCAACGACTTAATTGAAAAGGCAATATTGGATGCTGATATGAAAGGGGTTAAAGTGATTAGTCTAGGACTACTGAATCAGGTGTGGAGTTCTTACCTTTAAAGCTCGTGTAATGAGAATCAAATTAATAGTTTAATGGCATGGTAAAGGTTGAAAGTAGCATGATAAAACGTGCCAAAAATAAACAATAACAAGAAAATCTCATGGACATGTCCTCTGTTTCATGTTAAAAATGTGATTAGTTGAAAAAGGACAGCAGGAGTGCAAAAATTTAAGTTTGTGCTATTTTTAGGAATTCTCAAATTGCATTTTAGAGTGTGTATAATCCTGAATCATCATGAGAACTGAGCATTTTTTCCCCTGTTTCCTCTTCAGGCAAAACAGCTCAATGGAAACGGTGAACTATTTAGACAGAAGTATCCAAAATTAGGAGTTCGAATTGTCGACGGAAGTGGCTTAGCTACTGCAGTGGTGCTAAAAAGTATTCCTTCAGATGCAAAGAAAGTTTTTCTTCGTACAGGCACTTCAAAGATAGCTCGTGCCATTGCCATTGCACTATGTGACAGAGGTGTCCAGGTATAATCTATATATCAATTTGCAAATCATCGTTGTCTTGAATTTATTTTGGTTAATTTTTCTCATAATTTTTGCCTTAAATTGCATTACATTAATCTGGATCAGGTGATCATGAATGAAAAGGAGGTATACCACATGCTCAAGTCACAAATACCAGAGAACAGGGCAAGCTATTTGAAACTCTCGAGCGACAACGTACCTCAGGTAAAAAAATTGTTGCAAGAAATGGTGACAAACTCTCAAGCAACATGATGCACCTGTAGACTCTTCTACTAGTAATGTTAAAATGTAGCTTATAGACTCTTCTACAAGTAATGTTAAAATGCAGCTTATATTCATGCTAATACTTCATGTTTTGCAGCTTTGGATAGTACACAATATTGACGACAACGAGCAAAAGATGGCGCCAAAAGGAACAATTTTTATTCCCATATCACAGTTCCCCCTTAAGAAACTTCGCAAGGACTGCACTTACATGAGCACCCCAGCAATGAGGATCCCGGAGGAAATGAAGAACATCCACTCCTGCGAGGTAATACAGATATGTTATCTGCTTTGTTAATCTGAAAATATGCGACATCAAAGAACCTCTTCTTAATAGTGCTACTACCTTTGTGGTCAGAATTGGCTTCCAAGAAGGGTGATGAGTGCTTGGCACATTGCTGGAATACTTCATGCTCTGGAAGGATGGAACATGCACGAGTGTGGGGATGAGATGATGGATATTGAGAAATCATGGTCAGCTGCCATTCGGCATGGATTCCTTCCTCTCACTAAAGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006020