BGIOSGA006036

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Revision as of 02:32, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006036| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006036, complete gene.| tag = OJ1792_...")
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Gene Name

BGIOSGA006036

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006036, complete gene.

LocusTag

OJ1792_D02.27

Ensembl Transcript ID

BGIOSGA006036-TA

Ensembl Protein ID

BGIOSGA006036-PA

Length

3791

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26233218..26237008

Sequence Coding Region

26236966..26237008,26236401..26236477,26234328..26236154,26233957..26234149,26233218..26233873

Genome Context

<gbrowseImage1> name=IndicaChromosome02:26233218..26237008 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:26233218..26237008 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGGAGCAAAGCCAGCTATGGGTCAAACTCGAGGAGATGGTTGTCCTGTCCAACAGATCTATTCAGATTTGGAGAAAGCTACTGACTCTGACAAATTTCATGCGGACAGAAAACCTGCACCTTGTGACAGTTCTTCACGTAGAAAATCAAATGCAACTTCATTAAAAGTGTTATTAGCAAAAGAGATGATTAAAGAAGTGGAATTGAAGAGAAAGCCACCAAGTGTCGTTGCCCGATTAATGGGCCTTGAGGAGGATCTACCTGCTGATGGACCAGTTTTACACCAGGCCAAAAGTGGTTTCAGGAAAAGTCAATCATGTAACCAGTTAAAAGCACTAAACAAAGACTTAAAGCAACAAGAGCAGCATCGTCTCATAAAGTCAACGACACAAGATATCCACCCATTTTGTCAGGAAGCAGTTCAATATAATGATGTATATGAAGTATCTGAAGCACAAACACGGATGAGCTATTTTCAGGACAAAATTTCACAGAAAGGAGGGTCTTCTGGGAACACAAGTAACAGAGTGGATATTTTGCGAGGAAGTGTCATGGAGAAAAAATGCTTAGGCATGGCAGAGAAGCCATTTCATTCAAAGGACTTACAAGAAGCTCTTAGGGTTGTAAGTTCAAACAAAGATTTGTTTCTGAAATTTCTTGAAGAACCTAACTCAATTTTCTCAAGACAGTTGGTAGGGTCTCACACCAATCTAGCACCACCTCAGAAAAAACGGATTACGGTACTAAGGCCACTTGGTTCTTTTGAGAGTGATGGCACAAGACAAACTGGAACTGAGCAAATTCAAGAGCAAAATGGAGCAGCAATGAGAGAGTTCCATCAGAGTTCTAATTTTCAGGAAGAAAATCCCTCCTTGCCAAGTAGAATAGTACTCCTGAGGCCTACTCCAGGGAAGCCGAGTTTAACAAATGCAAAGCTAACCCCCAGGACAACTCCATTTCTATCAATTAACCCCAGTGATTTCAGGGTAGCATTGGATGGCAATGGGGCAACCCTACGATCTACAAAAGTAGAGCCTGGTATCATTCATAACCAGCAAGATGGCTGTCATCAAGGAGATGAATCTTTTTTATCTTCCTCATACTCAAATGGATATGGAGGAGATGAAAGTTCATTAGGTGATTCAGAAATTGATCAGAACAGTGATTCTGATATTGACTATATTGAAGATAAAGGTGGCAGCTTCAGTGACTCAGGGGGATGTAGTCCTGTGTCAAAGCGAACATGGCATTATACCAAAAGACATGGAAATCCCTCTCCGGGATCATCTTTTAGCAAGATTTCCCACTTTGCTGAGTCATCAGTTACTAAGGAAGCCAAGCAACGGCTTTCAGAGCGATGGGCAACTGTAACTTGTGATCAGATCAGTCAAGAGCAAGTGGAATTGCCAAGGAGCACATGCACCTTAGGAGAGATGCTCTCCCTTCAGGATGTGAAGAATGATGATTTCATCAATGAGTTACCTTCTGTTTCTACCAGTCGCTGTTATGACAGAGAAAATGAACTACCTACTCAAGCTAAATATGCAACTGCTTGTAGGAAAGATGAAAAAAATGGTGAGAGACCTATGGGGTTGCCAAGATCAACATCTGTTCCTCTGATTCCATCCACGCTTAATAACATGGTGGCAAATGTGAAAACTTCAAATCATCAGGGCCATGAAAGAACAAAACATGTTGTCGCATCAAATAAAGAAAAATCATTTTTCAGGGGTAGAGTTTCAGATTTCTTCTTTCCAAGAAGTAAAAGAACAACAAGGCAGATATCTGCCAATCATACATCTGATTTGTCTTCAGGGAATACTGAAGACTGTGGCGGTGATAGTCAACAAGATGCCAACCATGATTTGGATGGTAATGAAAAATCCACCATTTGTAAGGACATACTTGATATTTGTGCTGTGCAATCAACCAACACTTCAGAGGGAACAACTGCTTTAACTGATGTACCTGCATCATTGGATTGTCGAAGTGGAAACCTGAATAAACTAGGACTGAATGAGGTCCTAAATAGTACACGCGACCAACCCAGCCCTACGTCAGTTCTTGATGCACCGTCTGAAGATAGCAGTTGTAATGAACCTGAATCATCTGCAAGCACTACATCAAAAAATGCTAAAGCTGTCTCAAGATCTTCAGCAATTGAGGCTGTTGCTTGTTCCTTATCATGGGACGACACCACTTCAGAATCAACATTACCTGGCACCCGAGGGCAGTCTTCTTTTCTCCCTGATGTAGATGACGATGAATCGGAATGCCATGTTCTTGTGCAAAATATAATGTCGTCTGCTGGATTAGACGATGCGCAGTCGAGTATGCTTTTCACTGGCTGGCATTTACCTGACTGTCCTCTTGATCCGATTCTGTTCAACAAAGTCTTGGAGCTTCGGGAGCAAAGTTCATACCAAAGGCTTCTTTTCGATTGTGTCAATGTTGCTCTTGTTGAGATCGGCGAGAACACCTTGCTAAGTACATTCCCATGGAGCAAAGCACACTCAAAAACATGGATGGACGCCTCCTCTCCTGCATTGGGGATAGAAGTCTGGAGCATCCTGAAAGATTGGATTTACGGGGCACGGATGTTCGTGGTGAGCAGGAGAGATAATGCTGGGATCATGATAGAGAGAGTTGTGAAGCAGGAGGTTGAAGGAACAGGCTGGGTGAAAACGATGAGGACGCAGTTGGTTGACATCACCGAGCAAATTGAGGGTGGAGTCTGGGAGGAGCTGTTGGGAGAAGCTGTGCTGGATTTTGTTCCTGCCTGTCAACGATGA</cdnaseq>

Protein Sequence

<aaseq>MSGAKPAMGQTRGDGCPVQQIYSDLEKATDSDKFHADRKPAPCDSSSRRKSNATSLKVLLAKEMIKEVELKRKPPSVVARLMGLEEDLPADGPVLHQAKSGFRKSQSCNQLKALNKDLKQQEQHRLIKSTTQDIHPFCQEAVQYNDVYEVSEAQTRMSYFQDKISQKGGSSGNTSNRVDILRGSVMEKKCLGMAEKPFHSKDLQEALRVVSSNKDLFLKFLEEPNSIFSRQLVGSHTNLAPPQKKRITVLRPLGSFESDGTRQTGTEQIQEQNGAAMREFHQSSNFQEENPSLPSRIVLLRPTPGKPSLTNAKLTPRTTPFLSINPSDFRVALDGNGATLRSTKVEPGIIHNQQDGCHQGDESFLSSSYSNGYGGDESSLGDSEIDQNSDSDIDYIEDKGGSFSDSGGCSPVSKRTWHYTKRHGNPSPGSSFSKISHFAESSVTKEAKQRLSERWATVTCDQISQEQVELPRSTCTLGEMLSLQDVKNDDFINELPSVSTSRCYDRENELPTQAKYATACRKDEKNGERPMGLPRSTSVPLIPSTLNNMVANVKTSNHQGHERTKHVVASNKEKSFFRGRVSDFFFPRSKRTTRQISANHTSDLSSGNTEDCGGDSQQDANHDLDGNEKSTICKDILDICAVQSTNTSEGTTALTDVPASLDCRSGNLNKLGLNEVLNSTRDQPSPTSVLDAPSEDSSCNEPESSASTTSKNAKAVSRSSAIEAVACSLSWDDTTSESTLPGTRGQSSFLPDVDDDESECHVLVQNIMSSAGLDDAQSSMLFTGWHLPDCPLDPILFNKVLELREQSSYQRLLFDCVNVALVEIGENTLLSTFPWSKAHSKTWMDASSPALGIEVWSILKDWIYGARMFVVSRRDNAGIMIERVVKQEVEGTGWVKTMRTQLVDITEQIEGGVWEELLGEAVLDFVPACQR</aaseq>

Gene Sequence

<dnaseqindica>1..43#532..608#855..2681#2860..3052#3136..3791#ATGTCTGGAGCAAAGCCAGCTATGGGTCAAACTCGAGGAGATGGTATGTATATTTATGTGGGTATTTTATTAGAGGGATTTGAGGGTTTTCCATAAATTTCATTATTTCTTGCGATTATATCAAATTATTACGCCCTTCAGTACTTATTCTTCTTCATTTTCTCTTTTTTGAAACAGAAAATTGGCACTTCTTGAAGTGTTATACATCTAGTTAGTTCTATGTTATGTGTGGGAAATTGGATATGCTATGCATCTGGAAATATTAGCTAGGGCCATTGGGCCAATACTTTGCAGTATTGCTCTATCAAAGGCCATTTTTCTCATTTGGGGGGGGGGGGGGGGGGGGGGGGGTTACACAACATTGTATTATTCTTACGCTCTTCCAAGATAATGATATGTTTTGGCAGTTTCACTATTCCTTTTTATTTCTCGCTTTATTTTGCTTTTGTGGATCTTTAGTTTTTTCGGGTATATCTCTAAGGTTTGTGCTATTTGCAGAACATACATAATTTTTAATTTTAATCCTTTCAGGTTGTCCTGTCCAACAGATCTATTCAGATTTGGAGAAAGCTACTGACTCTGACAAATTTCATGCGGACAGAAAACCTGTGAGCATCCTGTGGCATACCTTTCTTCTGTGTGGTTAACTTAGGCTCCTCTACTCCTATGTGACAATTTTATTTTGATATGAAATGTGGTAGAAATAATTTTGAGAATAAAAGGCACATGAAAATGAAGTGTAAAACTATATGTAGTGCAATATGCTTATGCCATTAAACAATGCTGATCCAGCTAGTATTTTTTTCATTCCTGTGATGATTCTTTTTTTTTTATTAATATGGGTTTCTCTGCAGGCACCTTGTGACAGTTCTTCACGTAGAAAATCAAATGCAACTTCATTAAAAGTGTTATTAGCAAAAGAGATGATTAAAGAAGTGGAATTGAAGAGAAAGCCACCAAGTGTCGTTGCCCGATTAATGGGCCTTGAGGAGGATCTACCTGCTGATGGACCAGTTTTACACCAGGCCAAAAGTGGTTTCAGGAAAAGTCAATCATGTAACCAGTTAAAAGCACTAAACAAAGACTTAAAGCAACAAGAGCAGCATCGTCTCATAAAGTCAACGACACAAGATATCCACCCATTTTGTCAGGAAGCAGTTCAATATAATGATGTATATGAAGTATCTGAAGCACAAACACGGATGAGCTATTTTCAGGACAAAATTTCACAGAAAGGAGGGTCTTCTGGGAACACAAGTAACAGAGTGGATATTTTGCGAGGAAGTGTCATGGAGAAAAAATGCTTAGGCATGGCAGAGAAGCCATTTCATTCAAAGGACTTACAAGAAGCTCTTAGGGTTGTAAGTTCAAACAAAGATTTGTTTCTGAAATTTCTTGAAGAACCTAACTCAATTTTCTCAAGACAGTTGGTAGGGTCTCACACCAATCTAGCACCACCTCAGAAAAAACGGATTACGGTACTAAGGCCACTTGGTTCTTTTGAGAGTGATGGCACAAGACAAACTGGAACTGAGCAAATTCAAGAGCAAAATGGAGCAGCAATGAGAGAGTTCCATCAGAGTTCTAATTTTCAGGAAGAAAATCCCTCCTTGCCAAGTAGAATAGTACTCCTGAGGCCTACTCCAGGGAAGCCGAGTTTAACAAATGCAAAGCTAACCCCCAGGACAACTCCATTTCTATCAATTAACCCCAGTGATTTCAGGGTAGCATTGGATGGCAATGGGGCAACCCTACGATCTACAAAAGTAGAGCCTGGTATCATTCATAACCAGCAAGATGGCTGTCATCAAGGAGATGAATCTTTTTTATCTTCCTCATACTCAAATGGATATGGAGGAGATGAAAGTTCATTAGGTGATTCAGAAATTGATCAGAACAGTGATTCTGATATTGACTATATTGAAGATAAAGGTGGCAGCTTCAGTGACTCAGGGGGATGTAGTCCTGTGTCAAAGCGAACATGGCATTATACCAAAAGACATGGAAATCCCTCTCCGGGATCATCTTTTAGCAAGATTTCCCACTTTGCTGAGTCATCAGTTACTAAGGAAGCCAAGCAACGGCTTTCAGAGCGATGGGCAACTGTAACTTGTGATCAGATCAGTCAAGAGCAAGTGGAATTGCCAAGGAGCACATGCACCTTAGGAGAGATGCTCTCCCTTCAGGATGTGAAGAATGATGATTTCATCAATGAGTTACCTTCTGTTTCTACCAGTCGCTGTTATGACAGAGAAAATGAACTACCTACTCAAGCTAAATATGCAACTGCTTGTAGGAAAGATGAAAAAAATGGTGAGAGACCTATGGGGTTGCCAAGATCAACATCTGTTCCTCTGATTCCATCCACGCTTAATAACATGGTGGCAAATGTGAAAACTTCAAATCATCAGGGCCATGAAAGAACAAAACATGTTGTCGCATCAAATAAAGAAAAATCATTTTTCAGGGGTAGAGTTTCAGATTTCTTCTTTCCAAGAAGTAAAAGAACAACAAGGCAGATATCTGCCAATCATACATCTGATTTGTCTTCAGGGAATACTGAAGACTGTGGCGGTGATAGTCAACAAGATGCCAACCATGATTTGGATGGTAATGAAAAATCCACCATTTGTAAGGACATACTTGATATTTGTGCTGTGCAATCAACCAACACTTCAGAGGTAGGCACTTCATCTCATCTATCTTGCAAGCCAAATCGTATGTTCTTTTCATATAGCTGGGTAATTGATATGGGCACATTTATTCTTGAGTTATGACATCCTTTCTTCCATTTGTAAGAAATATTTATTCAATGCATTTGTTTGGCCACAGAGAATTTGATGAGAAATTTTATTACAGGGAACAACTGCTTTAACTGATGTACCTGCATCATTGGATTGTCGAAGTGGAAACCTGAATAAACTAGGACTGAATGAGGTCCTAAATAGTACACGCGACCAACCCAGCCCTACGTCAGTTCTTGATGCACCGTCTGAAGATAGCAGTTGTAATGAACCTGAATCATCTGCAAGCACTACATCAAAAAATGCTAGTAAGCCTAGTTTCCAGCCTAGAGTTCTTCAAGTCTCAGATTGGTTAGTTTATATACTGACATTTCTGCTTAACTTTCTTCAGAAGCTGTCTCAAGATCTTCAGCAATTGAGGCTGTTGCTTGTTCCTTATCATGGGACGACACCACTTCAGAATCAACATTACCTGGCACCCGAGGGCAGTCTTCTTTTCTCCCTGATGTAGATGACGATGAATCGGAATGCCATGTTCTTGTGCAAAATATAATGTCGTCTGCTGGATTAGACGATGCGCAGTCGAGTATGCTTTTCACTGGCTGGCATTTACCTGACTGTCCTCTTGATCCGATTCTGTTCAACAAAGTCTTGGAGCTTCGGGAGCAAAGTTCATACCAAAGGCTTCTTTTCGATTGTGTCAATGTTGCTCTTGTTGAGATCGGCGAGAACACCTTGCTAAGTACATTCCCATGGAGCAAAGCACACTCAAAAACATGGATGGACGCCTCCTCTCCTGCATTGGGGATAGAAGTCTGGAGCATCCTGAAAGATTGGATTTACGGGGCACGGATGTTCGTGGTGAGCAGGAGAGATAATGCTGGGATCATGATAGAGAGAGTTGTGAAGCAGGAGGTTGAAGGAACAGGCTGGGTGAAAACGATGAGGACGCAGTTGGTTGACATCACCGAGCAAATTGAGGGTGGAGTCTGGGAGGAGCTGTTGGGAGAAGCTGTGCTGGATTTTGTTCCTGCCTGTCAACGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006036