BGIOSGA006050

From RiceWiki
Revision as of 02:32, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006050| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006050, complete gene.| tag = OJ2055_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006050

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006050, complete gene.

LocusTag

OJ2055_H10.18

Ensembl Transcript ID

BGIOSGA006050-TA

Ensembl Protein ID

BGIOSGA006050-PA

Length

2117

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25998088..26000204

Sequence Coding Region

25999986..26000204,25998088..25998303

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25998088..26000204 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25998088..26000204 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCGTCTGGTGCCTCTCGGCCTCGGCCTCCGCCGCTGCGCCGGTGGCGGCGGCGGCGGCGGCGCCCGGGGCCCTCGGGGCCTCGGTGGCCTCCGTCTCCCTCGCGCGGGCGGCGGTCCCCTCGAGGAGGCGGCGAAGATGGGACGCGCTCGTGGTGTGCGCGGCCCCCGACGAGGAGAAGATTACGCGGCGGTCGCCCCTCGATTTTCCCATCGAATGGGAGAAACCAAAGCCTGGGAGGAGGCCTGATATCTTCCCAAAATTCAGCCCTATGAAAACACCATTGCCCCATCCATTGCCAGCTGATGATCCTCTGGATGATGATGAGGAGGAGGAAGAGGAAGAACCACAACCTCAGGAGGAACCACAGGAGGATGATCCTGACAAGGAAGAACCTGAGGAGGATGACCCGGACAAGCCAACGGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MASVWCLSASASAAAPVAAAAAAPGALGASVASVSLARAAVPSRRRRRWDALVVCAAPDEEKITRRSPLDFPIEWEKPKPGRRPDIFPKFSPMKTPLPHPLPADDPLDDDEEEEEEEPQPQEEPQEDDPDKEEPEEDDPDKPTE</aaseq>

Gene Sequence

<dnaseqindica>1..219#1902..2117#ATGGCGTCCGTCTGGTGCCTCTCGGCCTCGGCCTCCGCCGCTGCGCCGGTGGCGGCGGCGGCGGCGGCGCCCGGGGCCCTCGGGGCCTCGGTGGCCTCCGTCTCCCTCGCGCGGGCGGCGGTCCCCTCGAGGAGGCGGCGAAGATGGGACGCGCTCGTGGTGTGCGCGGCCCCCGACGAGGAGAAGATTACGCGGCGGTCGCCCCTCGATTTTCCCATCGTAATAATCCCCCTCTTCCCGATTCACCGTGAAAGATTCTATCGGTTTATGCACTGATTGTTCTCGTGTGTGTTGAATTGAGTGCTCGGGTTGAGGAATTTTTTTTTTTGGTCATTTTACTAGCTTATAGCATGCGGATTCATGGGATTTGGGGATTGGGGGTGGATGAAATCAGAAGAAATGCCATATATAGGTTCGTAGCTCGCAGGTGCTTGTCATTAGGTTGGACATTTTTTTTTTTGTTATGTGCTCCTCCGAATTGCACGGGCTCTATTAGATGGGAGCGTATCCTATGCACACAGGCCCTCGCGTGTACACACCGTGTACACCAACTAAAAATTATCACAAAAAATTCTAGAAAAATTCATACATGTACTTTCAATAGTATTACATCTACGTGCAAAGTCACATCTTCAAATTCATTCTACATAGAGAATAACAAAAAAGATAAAATTCTGACAAAATTGCAACCTTAAAACTGTCAGATTTTTTGTTTTTTTTTTGTTACGGCTAAAATATAATGAATTTGACGTTAAGATTTTAACCCTAGGTGTAATACAATTGAAAGTATGTGTATGATTTTTTCTAGATTTTTTGGTGACATTTTTTAGTTGGTGTGCACGTGTGTACACGTGAGGGCCTGTGTGCATAGGATATGTTGCCCTATTAGATAGAGCCATCCCAGTGACATTCTCCTTACTTTTCGAAGGAATTCGTCACTCTTCAGCATGGAGTGCCATTTGAAGAAGATCTCGGCTGGAGTACAAATATGTTATTTACTTACACTGCTTGTCCTGTGGATGGAGTTGTTTGAGTTAAAACAACTATAGGATGTTTGGAGGTCCATTGAAATTATCATAGGTTATTTGGAGGCCAGAGCTTGTTAAGCTAACCTTGTAGAACTCTGGAGATCTCTAAGTAGAATGTTGAGCAGATTAGCTGTTTATTATTCCGTGCCATGAGATTAGTTCCAAATGTTCATCCTTCAGTAAATAGAAGCACGAAATTTTATCTGGATTTATTGCTGTAACTTGCATTGAAGTAATCATGTTTGGAAGTAAGAACTCCTATCATATCCTTCTCTTAGCCTTTTCATTTCAGTTGTTCTCTTGATGTCATCATGCTAGTAATTAATTTAGCTTGTTTCAAACACAGCTTGTAGTTTGTTATATCCTAGAGAAGTACATGTTAGTTAATCCTTCAGAGTTAGTATAGTGATAGATAATGTTCATATGATAGTATGTAAGTGAACATCAGTGCTCAGGCTTATCAGTTGTTTTGTGTGCATTTCCCATTGTGAAGGTCAGACCATGTTACATGAAATCTTCCATTCACATGCACCATCATGTGTTCAATGTTGGTCGTGATTGTTATCATATTGAAACTAGATTTGTTGATTTATTTTTTGGGGGTAATGCTGACTAGCTGAGACAATATGGGAAAATTATCACCTCATGTCATGTTTCAATTTTTAATATGATAGCCATAGTTATGAGTACAAGCATCTTCTCCTTTTTCATATGGTTCTGTTTATATTACAGTCCACATCAGCAAGCATTTTCTTTCCATATGTGATTTGTCTTTAGCCTTAAGCAAAAAATATGCACTGGTTCAGTGGTTTATCCACCTTTTACGCTTTTGTGCTAGCATTGAAATAATGTCTATCTTTAATTAATTTTCAGGAATGGGAGAAACCAAAGCCTGGGAGGAGGCCTGATATCTTCCCAAAATTCAGCCCTATGAAAACACCATTGCCCCATCCATTGCCAGCTGATGATCCTCTGGATGATGATGAGGAGGAGGAAGAGGAAGAACCACAACCTCAGGAGGAACCACAGGAGGATGATCCTGACAAGGAAGAACCTGAGGAGGATGACCCGGACAAGCCAACGGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006050