BGIOSGA006077

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Revision as of 02:33, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006077| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006077, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006077

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006077, complete gene.

LocusTag

OSJNBA0030C08.32

Ensembl Transcript ID

BGIOSGA006077-TA

Ensembl Protein ID

BGIOSGA006077-PA

Length

6925

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25563986..25570910

Sequence Coding Region

25570312..25570910,25569893..25570205,25569454..25569600,25569273..25569361,25569090..25569182
,25568108..25568234,25567355..25567419,25567089..25567260,25565886..25566104
,25565666..25565713,25565403..25565549,25564761..25564843,25564170..25564285
,25563986..25564071

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25563986..25570910 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25563986..25570910 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCAAGGGCGGTCATCAGAAGAAGGAAGTATCTTTTGGATCATGTTAACGCACCTACCCTCTCATTGTCCCCCTTCTCTACCTTCCAACATGGAAGATCTGGTTCTGAGGATGAATCAAGAATCGGACAGCGATTTCTTGAGCAAAGCTCTGGGGATTCCAAATGGGAGCAAGGGCAGTATGGTGTGAAATTGATAAAGGGAGATCTACTAGCCCTTGGTAATGGGCTTCTGCGGCGCCCAGCCCATGGGATTTCTCTACCTGCTTATGGAATTGGAAGGAAGGAATTTGGGTTGCCTATGGGTGCTAGACATTTGCTGCAGTCAGTCCGCACAGCCTCAACTGCAACAGCTGGGCAACCTAAGTTGGATATTGAAGATGAACAGAGTGAGGATCAGAAACAGAACAAAAGGAAAAAGGAGGCATCCCCAGAAGAATGTGATCAGGCTGTGGAAGGCCTAAGCAGTGCAAAAGCTAAAGCCAAAGCCAAGCAGGTACAAGAATCTGTAAAGGCTGGCCAATCAATTGTACGAAAATTCTGGGCGAGGCTTCTGGGTATTGGTCCTGCTCTCCGAGCTGTTGCTTCGATGAGCAGAGCTGATTGGGCTGCAAAGCTGAAGCACTGGAAGGATGAATTTGTGTCAACGCTGCAGCATTACTGGTTAGGGACAAAGCTACTCTGGGCAGATGTGAGGATTTCGTCAAGATTACTGGTGAAACTTGCTGGTGGAAAGAACCTTTCAAGAAGAGAGAGACAACAACTGACCCGTACAACAGCAGATATCTTCAGGCTGGTACCTTTTGCTGTGTTCATCATTGTTCCATTCATGGAGTTCTTACTTCCAGTGTTCCTCAAGTTATTTCCAAATATGCTTCCCTCAACTTTCCAAGACAAGATGAAAGAAGAGGAAGCGTTGAAAAGGAAACTGAAAGCAAGAATGGAGTATGCCAAGTTTTTGCAAGATACTGCAAAAGAAATGGCAAAGGAAGTTCAAACATCACGTAGTGGAGAAATAAAACAAACAGCCGAAGATCTTGATGAATTTTTGAACAAGGTTAGGAGAGGTGAACATGTCTCAAATGATGAAATCTTGAACTTCGCGAAGCTGTTTAATGATGAGCTGACTTTGGATAACATGAGCAGACCACGCTTGGTAAACATGTGCAAATATATGGGTATTCGACCTTTCGGTACTGACCACTACTTGAGGTTCATGCTTCGCAAAAAACTGCAAGACATTAAGAATGACGATAAGATGATTCAAGCTGAGGGTGTTGAGTCTCTCTCTGAAGAGGAACTTCGGCAAGCCTGTCGTGAACGTGGTCACCTAGGTTTGCTGTCAACAGAAGAAATGCGCCAACAGCTCCGAGATTGGTTGGATCTCTCACTTAATCATGCTGTGCCATCCTCTCTTCTCATACTTTCAAGAGCTTTTACCGTATCTGGGAAAATGAAGCCTGAGGAGGCTGTTGTAGCAACCTTATCTTCTCTACCAGATGAAGTTGTGGATACAGTTGGGACCGTATTGCCATCTGAAGATTCGGTTTCTGAGAGGAGGAGAAAACTGGAATTCCTTGAGATGCAGGAAGAACTTATCAAGGAGGAAGAGAAGAAGAAAGAGAAAGAAGAAAAAGCGAAACAAGAGAAAGAAGAAAAGGCCAAACTCAAAGAACCAAAGGCTGCTGAAGAAGATTTGGCTTTGAAGGAAATGACTGGTCCTACTGCTAGGGAAGAAGAAGAACTGAGAGAAGCAAAACAGCACGATAAGGAAAAGCTCTGTAATTTTAGTCGAGCACTGGCTGTACTGGCATCCGCATCGTCTGTTAGCAAGGAGCGTCAAGAGTTCCTCAGCCTTGTCAACAAAGAGATTGAACTGTATAACTCTATGCTTGAAAAGGAGGGTACAGAAGGTGAAGAGGAAGCTAAGAAAGCTTACATGGCTGCTAGAGAAGAGTCGGACAAGGCTGCTGAGGTTGATGAAGAAGAAAAGGTCTCATCGGCGCTGATTGAGAAGGTTGATGCTATGCTCCAGAAATTAGAAAAGGAGATTGATGACGTGGATGCACAAATTGGAAACCGATGGCAAATTCTTGATAGGGATCTTGATGGCAAGGTGACTCCTGAGGAGGTAGCGTCAGCAGCAGCTTATCTGAAGGATACAATAGGAAAGGAAGGCGTCCAAGAGCTTGTCAGCAACCTCTCTAAAGACAAAGATGGGAAGATCCGTGTGGAAGACATTGTGAAGCTGGCATCACAAACAGATGAAAACAATGAAGATGAGGAAGAAGGACGGCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MASRAVIRRRKYLLDHVNAPTLSLSPFSTFQHGRSGSEDESRIGQRFLEQSSGDSKWEQGQYGVKLIKGDLLALGNGLLRRPAHGISLPAYGIGRKEFGLPMGARHLLQSVRTASTATAGQPKLDIEDEQSEDQKQNKRKKEASPEECDQAVEGLSSAKAKAKAKQVQESVKAGQSIVRKFWARLLGIGPALRAVASMSRADWAAKLKHWKDEFVSTLQHYWLGTKLLWADVRISSRLLVKLAGGKNLSRRERQQLTRTTADIFRLVPFAVFIIVPFMEFLLPVFLKLFPNMLPSTFQDKMKEEEALKRKLKARMEYAKFLQDTAKEMAKEVQTSRSGEIKQTAEDLDEFLNKVRRGEHVSNDEILNFAKLFNDELTLDNMSRPRLVNMCKYMGIRPFGTDHYLRFMLRKKLQDIKNDDKMIQAEGVESLSEEELRQACRERGHLGLLSTEEMRQQLRDWLDLSLNHAVPSSLLILSRAFTVSGKMKPEEAVVATLSSLPDEVVDTVGTVLPSEDSVSERRRKLEFLEMQEELIKEEEKKKEKEEKAKQEKEEKAKLKEPKAAEEDLALKEMTGPTAREEEELREAKQHDKEKLCNFSRALAVLASASSVSKERQEFLSLVNKEIELYNSMLEKEGTEGEEEAKKAYMAAREESDKAAEVDEEEKVSSALIEKVDAMLQKLEKEIDDVDAQIGNRWQILDRDLDGKVTPEEVASAAAYLKDTIGKEGVQELVSNLSKDKDGKIRVEDIVKLASQTDENNEDEEEGRQ</aaseq>

Gene Sequence

<dnaseqindica>1..599#706..1018#1311..1457#1550..1638#1729..1821#2677..2803#3492..3556#3651..3822#4807..5025#5198..5245#5362..5508#6068..6150#6626..6741#6840..6925#ATGGCTTCAAGGGCGGTCATCAGAAGAAGGAAGTATCTTTTGGATCATGTTAACGCACCTACCCTCTCATTGTCCCCCTTCTCTACCTTCCAACATGGAAGATCTGGTTCTGAGGATGAATCAAGAATCGGACAGCGATTTCTTGAGCAAAGCTCTGGGGATTCCAAATGGGAGCAAGGGCAGTATGGTGTGAAATTGATAAAGGGAGATCTACTAGCCCTTGGTAATGGGCTTCTGCGGCGCCCAGCCCATGGGATTTCTCTACCTGCTTATGGAATTGGAAGGAAGGAATTTGGGTTGCCTATGGGTGCTAGACATTTGCTGCAGTCAGTCCGCACAGCCTCAACTGCAACAGCTGGGCAACCTAAGTTGGATATTGAAGATGAACAGAGTGAGGATCAGAAACAGAACAAAAGGAAAAAGGAGGCATCCCCAGAAGAATGTGATCAGGCTGTGGAAGGCCTAAGCAGTGCAAAAGCTAAAGCCAAAGCCAAGCAGGTACAAGAATCTGTAAAGGCTGGCCAATCAATTGTACGAAAATTCTGGGCGAGGCTTCTGGGTATTGGTCCTGCTCTCCGAGCTGTTGCTTCGATGAGCAGGTCTCACTTCCTTCTCTTTGCCCTCCAGCCCATAATTTTAAGACAAGAATATTAATTTCCCCTTTCCCTTTCTTTTATTAACATTTGTTTCTTTTTATGTGTTCAGAGCTGATTGGGCTGCAAAGCTGAAGCACTGGAAGGATGAATTTGTGTCAACGCTGCAGCATTACTGGTTAGGGACAAAGCTACTCTGGGCAGATGTGAGGATTTCGTCAAGATTACTGGTGAAACTTGCTGGTGGAAAGAACCTTTCAAGAAGAGAGAGACAACAACTGACCCGTACAACAGCAGATATCTTCAGGCTGGTACCTTTTGCTGTGTTCATCATTGTTCCATTCATGGAGTTCTTACTTCCAGTGTTCCTCAAGTTATTTCCAAATATGCTTCCCTCAACTTTCCAAGACAAGATGAAAGAAGAGGTATGTCAGTGTAACAACTTGAGTTACATAATATGCTAATGTGATCAATATTGTTTAGGCGTTTGATTTTCTCTACTTGGTGTTGTCTTACTGATACTTTACTAATGCATGTGTACTATCATTATGGTAACAAGTCAATAGGAGGTTGTATGCATCTTCCATGTTTGCTAATGAGAGATTTTTGCATCTCGAGTTTAATTTGGTGTCCCCTTGTACCACCTATACTGGAACCACAAAAACTATTTCAGTGCAAATCGATTGGTTTAAGAATGTAGTTCACTCATCTATGCAGGAAGCGTTGAAAAGGAAACTGAAAGCAAGAATGGAGTATGCCAAGTTTTTGCAAGATACTGCAAAAGAAATGGCAAAGGAAGTTCAAACATCACGTAGTGGAGAAATAAAACAAACAGCCGAAGATCTTGATGAATTTTTGAACAAGGTATAAGTTCTATACATGCGTTGTTTGTCACTAGAAGGTTAGACGATTTTCTGAATTTGTTTGTCGAATAACTCACTTTAAATGGTAATTAGGTTAGGAGAGGTGAACATGTCTCAAATGATGAAATCTTGAACTTCGCGAAGCTGTTTAATGATGAGCTGACTTTGGATAACATGAGCAGGTTACCATTCTTAATATACTTGTAAGTTCATCATCACATTACACTAGAGCTGATTGCTGATTGATATTTCTTTTTTCAATTTTTCTGCAGACCACGCTTGGTAAACATGTGCAAATATATGGGTATTCGACCTTTCGGTACTGACCACTACTTGAGGTTCATGCTTCGCAAAAAACTGCAAGAGTAAGTACTTGCGTCGAGAAGATTATATGACATGTATGAAAATATTTAACTTAACAACTGGAGTGCCAATTAGATTTGCATATTTGGTGTCTTAAATCTGTTTGACATAAATATGACTGGAAGTTTGGAATGGTCAATTTTGAAATACAGCGAGTGATGGATACCTGGGGATAGCTTATTGCTTAGTACTTTCTCTCATAAAGCTTAGAAGACAACCATCAAATGGCATACTGAGTGATTTTTGCAATCTTGTAGTCTCTTATCATAACTGCATAATATAAGAACAGAGGTGGGTGGCCTGCAAATTGTAAAACAAAGGAGTGATTTCAAGCAAAAGTCTACGGCACCTAATTCATATGCAAAGAAAATAAACAGTAATTTTTTTGCTGGATATGCAACTGAAACTTAGTAAACACCAGAATTTGTATTTGTTTGTATTTTTCAAGATCTATGTACCCTAAGTGGCTGTGGCATACATTTGACTCGAACAGTTTCTCAGGTTTAACAACTATGATTATTTGCTGTACACATAAGATATTTTAACAGTATCTTATTATTCAATGCACTAGTTGTTTTGCTATTTACTTTGCTGCCATTTGCATTTTCCATAATAGTAGGGCAAAATATCTGGTTATTGTTTGTAGTGAGGGCCCACCTTCCTGATCCATAGGGGGCGTCTCCCCGAGTTTTTTTTTTTTTTTCGGTTGGGGGTTGGGGGGGGGGGGGGGGGGACTGGCTTTCGTGGCCTTCCTCAGCCCCCGGTTTCAGGTGTATTGAAATGCCCTGGGGGAGGTCTTTCCCCTTGGGACCGAGTTTATTTATTTTTGGTTTGTAATTATATTCTTCTATATGTAGCATTAAGAATGACGATAAGATGATTCAAGCTGAGGGTGTTGAGTCTCTCTCTGAAGAGGAACTTCGGCAAGCCTGTCGTGAACGTGGTCACCTAGGTTTGCTGTCAACAGAAGAAATGCGCCAACAGGTTGGTTTTGCATTGTTTCCGCTATATGCATATCCACACAATTTATTCACTCTTTTACTTGCTGGAATTATTTGTTACTCTCGCTGCCTATACGTCACTCTTGGCATTCATTCCTTTCTCACGTTATATGCCATTCTTCCTTTTTGGGACGAATTAGTTCACACCTTTTTCCATCCACTGTCCATTTAGTCCAAACAACATATCCGTGATAATGATATCTCATGCACATGTCTAGGCTTAACTTCGGTCATTTTAACACACCTTTGATTCTTGCTCGCTCAAGAATGACTAGTGATGCGGCATACTCATTTTTGTGTTTCCATAGATTAGAGCCATCCATCAATTTCCATGCCGGGCTTATAGTTTTGTTCTACAAAAGAATATATGTTTGTTCTGTGCAAAATTATTTGTCCTAGTTGTTACTTTCTCATTCTTTAGTTTATTACTTATTAGTTTGAGACATATGATCTCATTAGATTATTTCTTCTTGGGTAATGTTCTGTTAGGTCTGATAGGCAGATGAAGGAAAGTTGTAACTAGCACTTAACTTCTGCATTTCCACCTTGAATTGAGCACATAAAAAACTTGATCACATAGCTTTTAACCATACTGTTGTGTGTTACAAAAAACTAACTGCTATCTTGTAACTGAATATTTTTCTAAGCTAGTAATTTTGCTTCCTGTCCAGCTCCGAGATTGGTTGGATCTCTCACTTAATCATGCTGTGCCATCCTCTCTTCTCATACTTTCAAGGTAACATTGATTGATATCACATATTTCTCGTTTGCGATGATACTGCTGTTTGATTTGTTCGTGCTTGATTCTAACTCATATCTGGTGATGTTAGAGCTTTTACCGTATCTGGGAAAATGAAGCCTGAGGAGGCTGTTGTAGCAACCTTATCTTCTCTACCAGATGAAGTTGTGGATACAGTTGGGACCGTATTGCCATCTGAAGATTCGGTTTCTGAGAGGAGGAGAAAACTGGAATTCCTTGAGATGCAGGAAGAACTTATCAAGGTGATGTATACATAATATGGTCCTTTCTTTATGTTCATAAGATATTTCACTTCTGCTTGTGCAAATTAAACAGTTATTCTTGGGGCATTTATGAAATCAGTAAATCACTTTGATTGTACAAATATCAGCCGATGCAGAACTGCCCTCTGTTAAAATGCTTCCTGTGTTTAATCTTTATGTACCATATCTTAATTTATATTAAATTGTATTTGACCTAGTTCAGAAACACATCCATTTATAGGACAACTGATGGATCATCTGCACTCTGCATTCTCAGATTCTGATTTGTGTGAATGTTAGGCGTATTAGTATTTAGTATTGCATGTTCTGTTGTGCCCTTGCTAGGTTTCATGCTTGAACCTCATAGGATCTTCCATATCCTCTTGGTAATGCATATATCAGAAACAGTACATGGTTTATACTATTCAAACTTTTCCTTGTGAAGAACAAAAAAAAGAATGACTGAAAAAAGAGTAATTGGAGAAAACAACACATATACGATAGTGCATCTAAATTGTGATGCATTAACTGATTCTTGTGTGACGTGTGTTTTCACACGTGCCAAAGTTAGACTGTTAAGTTTCTGTTTATGTGCCCATATTAAGAAGTTTGGAGGAGTCATTACAAATTTTACTCAAATTTAGACTGTTAAGTTTCTGTTTATCAGCTAATCCATTGGATGTAAGAACTATAATATGCTGTATTTACACTTAGCTTGAGAAGAACATAAGTCTGTTGATGAAATCTGATGTGTCAACTTTAGTTTAATATTGTGGAAGGAACATGCTTTTTCCTTTTTCTGAAACAAATTACTTTCATTTCAGCAAAATACTGCTAGAAGTAGGACTAAACAGTATCCCAATTATTTTATGTTCTGCGTGATACTTCTAAAATCCCTAGGTTGAACTGTAGCCCGATTGTTCTATCTTCAGGATAATATTGCTAACATTGAATTGTTAATGCTTTTGATATGAAAATATTCAGGAGGAAGAGAAGAAGAAAGAGAAAGAAGAAAAAGCGAAACAAGAGAAAGAAGAAAAGGCCAAACTCAAAGAACCAAAGGCTGCTGAAGAAGATTTGGCTTTGAAGGAAATGACTGGTCCTACTGCTAGGGAAGAAGAAGAACTGAGAGAAGCAAAACAGCACGATAAGGAAAAGCTCTGTAATTTTAGTCGAGCACTGGCTGTACTGGCATCCGCATCGGTATGATCCTAGTTAGTCCATACTTTCTTTTGGTAACTATACACTGACTTTAGTATCCTTATAATTCTATTGAACCACTACTGTTTTTATATGATAGAAAATAATTATGCATTTCTTTTACTGTAATTATGAGCATTCAACAGGCCATTTTTCTGACTTCCTTATATTGCAGTCTGTTAGCAAGGAGCGTCAAGAGTTCCTCAGCCTTGTCAACAAAGAGGTATAATATGAACTTGTAAAGTGATATTAGAGTGACAATTGTTCATGCAGTTATCTTCCATTTTTGTTGCAAATACTTGGGAGGGTTCAATAACTCTTGGTCTTTGTTGAATGCAGATTGAACTGTATAACTCTATGCTTGAAAAGGAGGGTACAGAAGGTGAAGAGGAAGCTAAGAAAGCTTACATGGCTGCTAGAGAAGAGTCGGACAAGGCTGCTGAGGTTGATGAAGAAGAAAAGGTCTCATCGGCGCTGATTGAGAAGGTACTGATACTTTTCATCCTGCATGCAAATTCATAGTTTACCACGGTGACTGAAATGCCCCCCCCCCCCTCCCCCCTCCAGGTAACATGCATATTAGGTTCATCTCTGTTTTAAAATATAAGTAGTTCGTGTAAATCTCTCTGCTTGAAAATATAAGGAGTTCGTGTAAATCCTAAAAAGAGGATCACTTGAAACTTTGATTTATTGTTTTTTGATAAGTTTTCCTCTATAGATGGAATCTGCATAATTTTATTCCCCCTTCATATGCCAGCTTGAGAACAAAACACTATAGCTAACATCAACTGTGTTATACTTCAGATATACAGATTCAAGAATGATATGCCAGCACTCATTCTGAAATTTCTAGTCTTGGTTTTTTTTTATTGCCATGATTGACTTGTTACATGTTATGTACTTTCGTCTTTCTTGATTGACTTATGTATGAACTTCACCTTAGATGCTGGAGATGTTTCTCCAATGAACTACTATTGCTGATCAATACGGTCCTATAATATTTATGATTTGTGGTTTAGTCGTTGACAATCGTTCTGTATTTTAGGTTGATGCTATGCTCCAGAAATTAGAAAAGGAGATTGATGACGTGGATGCACAAATTGGAAACCGATGGCAAATTCTTGATAGGTATGTCCCTTGCTGTGTACTGAAATTTTTTCTGTGTCATGCTAGTCAACTAGTGTGTTTTGCTGTTCCACATCTAGTGAATTTTCATTAATATTGTCTTGCTAAAATAATTATTATTGTCACCTTTTTCCCTGTTATGAGAACGAATACTTACTACCATCTGTTATTATAATTTATCCGCCATGCCCTTACAAGTGAATTACAACTCAGATAAACCAATTCAACTGTTTATAGCTGTGTGAAAATCATAGTTGTAGGATAATTTGGCCGATTCATGTGCCTCAGTACAATGAATATATGAGACGTATTCCCCTCATTAAGCAAAAAATGTTTTGAAATTAAGTTCTGTTTGCACAGATGCTTCTCCTGGATAATGTGGGAGCTTGATGTTTACTTGATTTGTAGTAAAGAGTTATTGACCAGGACATCAGGTTGCACTTGGAAGTTACAAACAACTTGTGGATTTTGTTTGCAGGGATCTTGATGGCAAGGTGACTCCTGAGGAGGTAGCGTCAGCAGCAGCTTATCTGAAGGATACAATAGGAAAGGAAGGCGTCCAAGAGCTTGTCAGCAACCTCTCTAAAGACAAAGGTCCTCCCTGATGTTTTTATGTTCTGCTGATGATAGTGCATGCACAATTGTTTGTGCTGTTTCCTAACTGGTCCTCTGTCTTTTTTAATATGCTACAGATGGGAAGATCCGTGTGGAAGACATTGTGAAGCTGGCATCACAAACAGATGAAAACAATGAAGATGAGGAAGAAGGACGGCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006077