Os12g0534700

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Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0534700| Description = Protein kinase-like domain containing protein| Version = NM_001073464.1 GI:115488889 GeneID:4352415| Length = 3350 b...")
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Gene Name

Os12g0534700

Description

Protein kinase-like domain containing protein

Version

NM_001073464.1 GI:115488889 GeneID:4352415

Length

3350 bp

Definition

Oryza sativa Japonica Group Os12g0534700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21438367..21441716

Sequence Coding Region

21438410..21438599,21438908..21439128,21440928..21441512

Expression

GEO Profiles:Os12g0534700

Genome Context

<gbrowseImage1> name=NC_008405:21438367..21441716 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:21438367..21441716 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgggggagggggaggcaacgacttgccacaagagatcggcggcggggcaggaggaggaggaggagtcgaagaggccacgcgatggcagcgaggaggaggaagagctgctcaccgacctctcccgctaccgccgctactggacggatctgtggtccgacgtttccggcgacatcgccaaaagaactgagtttggtcccatgcggtacacggaggaaccggtgcccccgttcgcaaagctccaagatttactagaggttttttcttttgaggtgactgagctgaaaggtattctaagctggccaatagatgtgtttggcctcatctctgtccgtgactcgctggaccggaatcgcaactatatctttgagcgcaccaggaactactgccagactctcactgcaaaggattcatctctggttctcactggtccaagccgtgcagtccaattgattgaccctgttgaatttgaaattgagctaagagtcaaggggacaagtccctccaaagataagatcttgagcgctgaagcatttgggtataactgcattgctcagagactcagatgtggctcactccgcagtatgatgttatcaggagcacgcagcacattggagttcaagtatgcacacattcctttggcattggaggctacaatcaaggtcaggattactaggggttcaactgatttctgtggaaagttcattgcacatactgctagtatcaaggaagatgtcatattgctggactctggagaagaaatggtggctatctcccatgatggagccattaatttctcccgcagtgtagttgcagttgaaggaaatggcggagttctgactgttggtgttcatgcaaggcagagtggtggtgagaatatgagatgttcttataaagagtttatcccggtaagatgtggacggagtcatgacacacttgatgttggattttgccagatgagcgttgaagttgcttggtcgctcatcttttaa</cdnaseq>

Protein Sequence

<aaseq>MAAGEGEATTCHKRSAAGQEEEEESKRPRDGSEEEEELLTDLSR YRRYWTDLWSDVSGDIAKRTEFGPMRYTEEPVPPFAKLQDLLEVFSFEVTELKGILSW PIDVFGLISVRDSLDRNRNYIFERTRNYCQTLTAKDSSLVLTGPSRAVQLIDPVEFEI ELRVKGTSPSKDKILSAEAFGYNCIAQRLRCGSLRSMMLSGARSTLEFKYAHIPLALE ATIKVRITRGSTDFCGKFIAHTASIKEDVILLDSGEEMVAISHDGAINFSRSVVAVEG NGGVLTVGVHARQSGGENMRCSYKEFIPVRCGRSHDTLDVGFCQMSVEVAWSLIF</aaseq>

Gene Sequence

<dnaseqindica>44..233#542..762#2562..3146#ctcgctccgagaaagttcaggctagggcaaaagccggagggggatggcggcgggggagggggaggcaacgacttgccacaagagatcggcggcggggcaggaggaggaggaggagtcgaagaggccacgcgatggcagcgaggaggaggaagagctgctcaccgacctctcccgctaccgccgctactggacggatctgtggtccgacgtttccggcgacatcgccaaaagaagtgaggaagcttcttttttttttgttttgttttacagatgattttatggtaaatacgaattcgctcatgctcttgttaggtttttagttttcatctcaaatcgacatgctcgctcgctgattatggtaggcgggagcctggggtgcacaattgtgggggatggaaacatgaacatggaaaatgttgggattgctatttttcacatgaatttctatcaatgatataatggctcatctctttggtatgttgcaaaggaaaaagaaatggtaatgcttgactgattgatgtggtttattggatggatgcagctgagtttggtcccatgcggtacacggaggaaccggtgcccccgttcgcaaagctccaagatttactagaggttttttcttttgaggtgactgagctgaaaggtattctaagctggccaatagatgtgtttggcctcatctctgtccgtgactcgctggaccggaatcgcaactatatctttgagcgcaccaggaactactgccagactctcactgcaaaggtacctctatgcttcatggaaataacagcgcaaagtcatcagtcttttgacttttatacaggcagctagttagttttgcaatttcacaattgtggtgcactagtgcagtactttttcactgcactgcaatctagagatgtctgctgcagttccgttaagaaattggatgttacttaaacagattagaacagtccaaacttatatgcacatcatggttccatttcacaaattatatgtgatagtctggtactagttgtatcacagaagcatattagtaaacaacttgaaatattcaaatgctcatgatttagaatcatgtaatggcatttcttttttaccaaaggcaaaacataaaacctgtgataacataatcaagcaaattttccaatctcaaactcccctacacaccagagcttagcaaattctcatgatatataaggggcaccacaaacatgtgtgttgctaacagaaacaactacagaaacattcggtgtgcaggcgctgaattagtacttcaaaataaaaggctaccaaatcatcaattgatagcacatgcaagggcacttccccactctgatttaattcatagaaactagcgttttgccccatatgaacttgcagaggctatcttttcttgcaacatctgtgctccttgcttcagtttgtctgcaagaactgtattcttttgccaatcattcaagtaggatatttaaacacacccctcatgaatgcgtgaatggtaaagtgagggtcaagaactttcctatggtcaaaagagatgctactctctcggtagtacaactgtcctaactgcagcaagacgaatcatgcatggattcatctccttgcagtacagcttgagcctaagggaaaacattttgcaaatatttaagggtaattaacactgcgagaacacacctgaaaggttgtaagcaggtcacagtaacagcaagtgatcaattgtgtttcaggtttggcagacatataatatttgttatctcatagccatcttcgtttctttattgcaatagccatcatgttttaatgggattgttgaatattgaacattattaatgccaatttccaagagcctaaggagatgcaatggtgatccaccattgatgatagaaaggaaattctttgagatgttttagggtagaggaaaaaaggtagcaccaagagtacagtttacccaacaataaactacaatttgttgtgatattttgacatactatgaatattctttatgaaaagctcctgaaaaaaagtgttaataaataatgattgtattaatactacacttctgtgacaacagtgcaatattaatttgtgagtgctggtcattaaagattcaagcaataaagatgaagttgtcaatacatatattaaatattaatcgtagatcatatatatgcttattttcctatgccgtatcaatgtgttcttgagcaaagggaaaatagaaattccaagttgagttatgcatagcatgctgtcaggctcacatatgtttttctattcataattatatgctcatgtttttattttgttttgacagttcaaatgtgccattcatattgttttgttgagtggaacttaggacacagaacgcaatagagttatgcacgtttgttcaccttcagtctagctagtttcatcttatccaataaatttggaaatatttgctatgttacatcgttgctaccattcctttccaattgttttcatgcagagctaagtggtggattgcgcatcattactattattcttatatttagtaatgtcatcagtgtgtgtaggattcatctctggttctcactggtccaagccgtgcagtccaattgattgaccctgttgaatttgaaattgagctaagagtcaaggggacaagtccctccaaagataagatcttgagcgctgaagcatttgggtataactgcattgctcagagactcagatgtggctcactccgcagtatgatgttatcaggagcacgcagcacattggagttcaagtatgcacacattcctttggcattggaggctacaatcaaggtcaggattactaggggttcaactgatttctgtggaaagttcattgcacatactgctagtatcaaggaagatgtcatattgctggactctggagaagaaatggtggctatctcccatgatggagccattaatttctcccgcagtgtagttgcagttgaaggaaatggcggagttctgactgttggtgttcatgcaaggcagagtggtggtgagaatatgagatgttcttataaagagtttatcccggtaagatgtggacggagtcatgacacacttgatgttggattttgccagatgagcgttgaagttgcttggtcgctcatcttttaatattgaaaaaagtctaggccctgataatatttttcttgcatatgacaatacttaatattcggtattagtagtggaagtaatagatgtgctccgtggcattgtaatacactaatatgacagtactgagtttggaccgggggcctcacgatccatgccattgtaaatttgctactctatatcataaaaatgctattattattcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0534700, RefSeq:Os12g0534700