BGIOSGA006080

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Revision as of 02:33, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006080| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006080, complete gene.| tag = OsI_080...")
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Gene Name

BGIOSGA006080

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006080, complete gene.

LocusTag

OsI_08001

Ensembl Transcript ID

BGIOSGA006080-TA

Ensembl Protein ID

BGIOSGA006080-PA

Length

6072

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25510163..25516234

Sequence Coding Region

25515943..25516234,25513716..25513885,25513523..25513592,25513136..25513241,25512839..25512959
,25511959..25512099,25511731..25511863,25511513..25511589,25511383..25511435
,25510694..25510748,25510163..25510438

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25510163..25516234 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25510163..25516234 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGGCTCGGCTTCCTTCTCCTGCGCCGGTGGCTCATCCTCCTGCTCTCCGCGCGCGCCCTCTAGCTCCGCATCTATACGCCGCCCTGCCGCGCGCTCCCTATCCGGCATGGCAGTGGCGCGGTGCTCGGGCGGCAAGCCCGGCGAGGAGGGAGGCTGTGGTCAGGGGGGCAGCCGTAGCAGAGGACGAAGGAGTGGAGCTAGCCGATGACGACGACGGCGAGCGCGGGGTGGGGGGCGGCGACGGCGGTTCAGAGTCCTTTCGAACCCCGGCTAGGCATCCTCCCGATTTGTACAACGTTGTGTTCACTTTAGTCTTTTTCAGGAAAGCAAGTCTTGCGATGGGTGCATCTGCCAGCAGTTCAGTAACGTCGAAGCTTACTAACGATGGAGAGAATCAGAGAGTTAAGTATGCCTCATCAACTATGCAAGGATACTGTCCGACAATGCAAGATGCTCTTGCAGTTGAACTAGATCTAGATGCATTAAGGAACACATCATTCTTTGGTGTTTATGATGGCGATGGAGGAGCTGAAGTAGCAATGTACTGTGCAAAACGATTTCATGCTATGCTTTGCGAGGATGAAAACTATCTCAACAATCTGCCCAATGCAATTACATCTGTGTGCTCCAGACTTGATGATGATTTGCAACGATCAAATGAATGGAAGGAGTCACTTTATCCCCGTGGTAATGGTGAATGTTTCCAGTTCCTTAAGACTGGCGTTTGTGCTAACCTCTGGCATTCCGAAGAGTTGGGATTTATGCTCCCTCAGCAGGCTTACAGGGCGCCGTTATACGAAGGAAGCACAGCATGTGTGGTAATCATTAGAGGAAATCAGATCACTGTTGGAAATGTTGGTGATTCTCGTTGCGTAGTTTCACATAATGGCCAGGCAATTGATTTGTCCATTGATCACAAACCAACCGTTGGAAGTGAACGCGAGAGAATTCTAAGAGCAGGAGGACGAGTATTGGTAAAAAGAATTCCTGTCATGGGCTCAGATGGAAGACTCATGCGAGGATGGGGTTATTTTGAATTAAAGAAGAACCAAAATATTCCTGCTTCACAGCAGATGGTGACATGTGATCCTGAGTTTACCATTGTGGACATAACTGCTGATACTGAATTTCTTGTCATAGCAACTGACGGCATCTGGGGTCACATGTCAAGTCAGGACGTGGTTGATTTCATACGCAAGGAATTACACTCGGGGGAGGAAAATCTGCGCGCCATTTGTGAGAAGCTTCTTGATCATTGCTTGACCTCGAGGGACAACGTGACGGTCATACTGGTTCGGTTCAAGCCCGGCGCCGCGGTTATCCCTATCCTGTCCGACATCGATGAGGAGCCTGTCCTCTCCGACGTTGAGGAGGAGCCCCATGAACCTCAACAAAATCCCGGGGATGGCGGCGGCGGCGGCGGCGGCCAGCAAGACATCGGTGGCGAATCAGAGGAGCTCCCATTGGCCCATTTTCCTCAGGAATAG</cdnaseq>

Protein Sequence

<aaseq>MAAARLPSPAPVAHPPALRARPLAPHLYAALPRAPYPAWQWRGARAASPARREAVVRGAAVAEDEGVELADDDDGERGVGGGDGGSESFRTPARHPPDLYNVVFTLVFFRKASLAMGASASSSVTSKLTNDGENQRVKYASSTMQGYCPTMQDALAVELDLDALRNTSFFGVYDGDGGAEVAMYCAKRFHAMLCEDENYLNNLPNAITSVCSRLDDDLQRSNEWKESLYPRGNGECFQFLKTGVCANLWHSEELGFMLPQQAYRAPLYEGSTACVVIIRGNQITVGNVGDSRCVVSHNGQAIDLSIDHKPTVGSERERILRAGGRVLVKRIPVMGSDGRLMRGWGYFELKKNQNIPASQQMVTCDPEFTIVDITADTEFLVIATDGIWGHMSSQDVVDFIRKELHSGEENLRAICEKLLDHCLTSRDNVTVILVRFKPGAAVIPILSDIDEEPVLSDVEEEPHEPQQNPGDGGGGGGGQQDIGGESEELPLAHFPQE</aaseq>

Gene Sequence

<dnaseqindica>1..292#2350..2519#2643..2712#2994..3099#3276..3396#4136..4276#4372..4504#4646..4722#4800..4852#5487..5541#5797..6072#ATGGCCGCGGCTCGGCTTCCTTCTCCTGCGCCGGTGGCTCATCCTCCTGCTCTCCGCGCGCGCCCTCTAGCTCCGCATCTATACGCCGCCCTGCCGCGCGCTCCCTATCCGGCATGGCAGTGGCGCGGTGCTCGGGCGGCAAGCCCGGCGAGGAGGGAGGCTGTGGTCAGGGGGGCAGCCGTAGCAGAGGACGAAGGAGTGGAGCTAGCCGATGACGACGACGGCGAGCGCGGGGTGGGGGGCGGCGACGGCGGTTCAGAGTCCTTTCGAACCCCGGCTAGGCATCCTCCCGGTAATGCCAGGGGCGGCTGCTTGTAATAGGTCTTTGCCTTGGGTTTCAGTGCTATTGCGCTTTTGCCCTCGTCAAGTAGCCATCCTATTAGTTGCAGCTGGTGACCGCCTTCTTGTTGCCCACCTTTTTAACTCTTGTAGTAAGCCATCACAAGCCCTTCAATCAATGAAAGAAGTTATCCCGCGCGCCGTGGACCTCAGCGTAGCGCCTCGTAGCTCCTCCGACCGGGGAGGAGCAGCATCAGCATCAGCGGAAGTCCACGTGGTCCTCTCGACCGGGACGGCGGCGCGAGGACCAATGCGGCGGCTACGGCGAAGAGAAACCGCTCGGCGGCGGCGTCGGCGGCGGCGGCGGGAGCGGAGGAATCCTCACCGGCTCTGCATCGGACCGCACACGTGGACACCATCTGACGGCCAAGGCGTTGCAAAGGGGCCCGGGGGAGCACGAGCAGCACCGTCGGATCAGGCGCTGCTGCCACGTATATCCGATCCAACGGAGGTGATGCGTCCACGCAGCCTTCCTGTGCGAAGTTGGTGCTGCCATTGCATTTGCGCTTTTGCTTCGCGAATCGCAACAACTCGCTGCAAAGAGCAGCGGAATTGCGGAGAGGTGAGGACTTGATCTCTCTCACATTCTCTCGTCGTCCTCCTCCTCATCTGCTTTCCTCTGCTCCAAGACAACGCGTAAGATTCCTCCACCTTCTCCCATGGCCATGTGATTGTGTAACTGTGTTGGTGGCGCTGTTGGTAGCTGCTCTTCTCGTTCTTGTTGTTCCGTTGCTACTCCTGATCGAGATTCAAGCAGTGTGACGATTTTTTGGGGGTTCTACTTTGCTCTCCAATGTTATCTCGTGTTCTTGCATCAGATTGTGTTGTTATTTTGCTGCTTTTGAAGTTGTTGGTGTGGTCTTCTTCGAGGAGGGAGGGTGACGAGCACCGAGAGCCATGGTGATCTCTGTCCCCGTCTTCTCTTCGTTTTCGCCTGCTCTTTTTTCCATCTGTTTTTCTTGCTTTTGCTGCTGCTGCTGCTGCTTTTGAAATTGGTTGCAGTTTTCTTGAAGTGGTAGAGGAGGGGTGACGAGCACCGGAACCTATGGTGATCGACGTTGCCCTCTTCATTTCGATGTTACTCGTCCATTTCTACATTGTTTTCTTGGTGCTCTTCAGCAGTTGCTTTCGCTATTGGCGTGGGATCCCATGGTATCATGGTAATCTGTTGGATTGGAGGAGGGGCTAACGAGCACCCGCAACCCCATGGTGATCTCCGTTTTGTCTCCCTCTCGGTACGGAATGGTGTTGTTCTTCTTGAGTTCATCTTCCGTTGATATTCCTGGGCCTTTATTGATGTGTGCATGGCAACTCTACGTGTTCTTCATCTTCTCATCTCTCACTTTATTCTGCTTACCTCTTATGGTATGTTGTTGTTCCAGATTCTTTCTGCATGTGGTGATTTGGGTGTTTTCACCTTCTTTCACAAATGTGGGTTTTGACGTTTTGTTGATTCCTCTTGTTCTTGCTGACGTTATGCGTGCGGAAAACTCGGTGATCGTTATCTGATCAGCGCTTATTGCTGTTGAGTGCTAACAAACGGTGCAAGAGTAAATGAGTAATTATCGGTGTTTTTTATTTCTTCATGAAAGTACTTCTGATTCTTTTGATATCAACAGATATTTCCATTTATAGATGTAACTTGTAAGTTGTAGGTCCCCCTAAGTAGTTTTTGTTTTTTGCCGAGCAACGATCTAGTTGTTTCAAGGTTCGATGGTGCCTTATTATTGATTTTTTAATTTCCCCATTATGGTATCAAGCGTTATTTCTGTAAAGTAGCTTAATACCAGCAGCAGGTGTTATTGAAATTTCAGAGGGAAATCTTAGCCTGTGAATAGTTCTCCCCTTTGTAATGATCAGGTGCCCTGCTGGCTACTGTGTTTAGTTTCGAGACGCTTTTTGGATGTTCTTTTGGGTTCTGAAATGTGGAAGAGCTTGTCATTTTGGACGCTCTCTTCTTTTTAAGACGTAGTGACTTGGATCAGTATTGAACAATATTTGGTTAAACAGATTTGTACAACGTTGTGTTCACTTTAGTCTTTTTCAGGAAAGCAAGTCTTGCGATGGGTGCATCTGCCAGCAGTTCAGTAACGTCGAAGCTTACTAACGATGGAGAGAATCAGAGAGTTAAGTATGCCTCATCAACTATGCAAGGATACTGTCCGACAATGCAAGATGCTGTGAGTAATCTTGCACTGCCTTTATCAATTTTGTTGGGATCATAATCCTACAGATAAAGTGTTAACTTGCCGGTAATTGTGGCCCAATACTGAGCTTGATTTATTCCTTTCTTATTGATCTAGCTTGCAGTTGAACTAGATCTAGATGCATTAAGGAACACATCATTCTTTGGTGTTTATGATGGCGATGGAGGTTTGATCTTCACTCTCATCTTTTTCCAACAAATGTCCAACTATTCATCTGTTAGCATAACAGACCTTCGTGCGTTAGTTAAAATATTGTACGATTCATAATCCCCTAAAAGGAAAGAGAGTGTCCATTTTTGTTCATAATGGCAATATGTCAACTGCCATATATAGGCTCTGTTTCCTATCAAAGATTCTAGTAACACAGGATTGCAGTTGACTCATCATCCACTCTCTATTTTAGAAAATATCCATACTGAGTTTTTTTTTTTAATCTTTTCTCTTCAGGAGCTGAAGTAGCAATGTACTGTGCAAAACGATTTCATGCTATGCTTTGCGAGGATGAAAACTATCTCAACAATCTGCCCAATGCAATTACATCTGTGTGCTCCAGGTTATTTTGTCGATAATTGTTTCATGTACTCTGCATATGGTGCTACATAAGTCCACTCCTATTTTTCTATGGTGGAAAAAAGGGGACATTGTTGCACCCATTTTATTCATAGAATCATAGTTGCAATATGTCTTGGAAAAACGAATTATGTAATCAGTGTTCCTTCTTAATCGCAGACTTGATGATGATTTGCAACGATCAAATGAATGGAAGGAGTCACTTTATCCCCGTGGTAATGGTGAATGTTTCCAGTTCCTTAAGACTGGCGTTTGTGCTAACCTCTGGCATTCCGAAGAGGTGATATATCAACTTATGATTGTTCTTTACACATCCAACTGCACAGAAGTTAACCAAAGTTTTATTTCTAGTCGTATTCGTATAGAGTGCATATTATTATCTTGAAGAAAATCAGGAGTATGTATGATATGAAGTCCATATTTTTCTTTCCCAAGATATGATCTGGAGTTCCAAGTGGTACATCATTACATTTCACACCTGATGCAGTTATTATGTCACGTTCTTGTTTTACAGAATTGGAGCCATAAGCTCATTAAGTTCTTGCACTTTGATTGTCATCGTACTACCCAAAATTGTAGTGTTTTCTGATACCAGCATATTACTCGTGTGTTGCAATACACACAACGGGATTTTAATTAAAGAAAAATATTATTAACCCATTATGCCAACATGTGGATCCTCTAGCCCCCCTCCCCCCCCCCCCACACTGTCCATTTTCCTTTTTATGAAAAGTAGGGAGTTGGTGCTGACATGTGGACCATCTGGTCCCACTTGTCCTTTTACTTTTCCAAATAGTAGGGAGTTAGTGATGACAGTGGTGATAGATTCACCACTCACCACCATCACTACTCTATTTTATAAGAGTATAGAGTATAGATGCCACTTTAAAAGACTCATAATGTCTTTTTTACATTTATTTCTTTATTTTTTGTACGCTGTTTTTCTCCAGTGCCATTTCACATATTTATATACCCTTTTTCTTTCATGGAACTATTGAATTGTTTGTTTTACACTTCAGTTGGGATTTATGCTCCCTCAGCAGGCTTACAGGGCGCCGTTATACGAAGGAAGCACAGCATGTGTGGTAATCATTAGAGGAAATCAGATCACTGTTGGAAATGTTGGTGATTCTCGTTGCGTAGTTTCACATAATGGCCAGGTATAGTGACTTTTTTCTTGTCAAATGTCTCATTGCTTGGATAGCTAATGCATTAATTTGATGCCTATTTTTTTCTATTTATGTTGCATCCAAAGGCAATTGATTTGTCCATTGATCACAAACCAACCGTTGGAAGTGAACGCGAGAGAATTCTAAGAGCAGGAGGACGAGTATTGGTAAAAAGAATTCCTGTCATGGGCTCAGATGGAAGACTCATGCGAGGATGGGGTGTGTCTCGTGTTCAAGGACTATTACATGTGTCCAGAGCGATTGGTATACTATTAATCTTATTTCTTTCTGGTTGTTTACTTGTTTGTATATCATATATTTCATCAATTGTAATTGGCGTTCTTCTTACTTACATTTCAGGTTATTTTGAATTAAAGAAGAACCAAAATATTCCTGCTTCACAGCAGATGGTGACATGTGATCCTGAGTTTACCATTGTAAGTATATCTAAGTTCTTTTAGAGGACTAAAATAATTTTGCTGGTTCTGATCTGATAGCTTTCCTTTTCTGTTAGGTGGACATAACTGCTGATACTGAATTTCTTGTCATAGCAACTGACGGCATCTGGTGGGCCATCAACTATACAAATAATAGATGTGATTTCTTTTCGTTATGCTTGCTCCCGATTTAAAAAAAAATATCATGCAGAGTATGCCCACTCCAGATTTTTAGATATATGCATAGCAGTATAGCATATGTATGTAGGCTTATTTAGTGTTGACACAGGAGGTTCATATACCCATGTATGCACATCGGTTCAGCTAAAGTTAACTTGCTTGCTTCTTCTAAGACTTGGTTTAATTTAAATTAGATGTGTAGTTCTCTATGTTTTCTCATGGTGAATGATTTGAATTATTTGTGCCAATCCCTGTGGGTCTGCACTAGGTATTTTTTCATAGAATTCAGATGATTATTTAACTTGTTGGCTTGGTATCTGATATGCTTACTAAGCTGGAAATGGCCAGCGTGCCCCTTGTATATCTGACTTCTACTGTAAGGACATGCTTCGAGAACCATGGCACTCCCTGAAACATTTACACTGGTAGGAATTATGCTAAATTACAGTATATAACTTGTCACTGCTAATATTGATAAAGGATTGCAATCTGCCATATATTTTCTGTCTGATATGCAGCCCCCATCTTTGACAATTTCATTCATATTCTCATAGTAAAGTTAAACTCATTTTTTTCCCTTTCAGGGGTCACATGTCAAGTCAGGACGTGGTTGATTTCATACGCAAGGAATTACACTCGGTGAGTCCACCTTCCTCATTTTTCTCTGATTGTCATGACAGTAATGCATAGAAGAGTATCCTTTCGAATGAATAAAGTTCAAGAACCTACCTTCATAGTTCATACATGCGCTCTTGAATCAAGTAGTAATTTTTTACTCCATTTCTAAACACATATGTGGGTCTGCTTGGCTGGCTGGTTGGTATTTAGGCAATTGAAATCTAAAGTCTACATGCCTGTAACCGTTCATCCATTTGTTGCTTGCAACCAACACAGGGGGAGGAAAATCTGCGCGCCATTTGTGAGAAGCTTCTTGATCATTGCTTGACCTCGAGGGACAACGTGACGGTCATACTGGTTCGGTTCAAGCCCGGCGCCGCGGTTATCCCTATCCTGTCCGACATCGATGAGGAGCCTGTCCTCTCCGACGTTGAGGAGGAGCCCCATGAACCTCAACAAAATCCCGGGGATGGCGGCGGCGGCGGCGGCGGCCAGCAAGACATCGGTGGCGAATCAGAGGAGCTCCCATTGGCCCATTTTCCTCAGGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006080

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006080&oldid=59632"