BGIOSGA006083

From RiceWiki
Revision as of 02:33, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006083| Description = cDNA clone:J023104F18, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA006083, complete gene.| ta...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006083

Description

cDNA clone:J023104F18, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA006083, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA006083-TA

Ensembl Protein ID

BGIOSGA006083-PA

Length

5289

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25492316..25497604

Sequence Coding Region

25497351..25497604,25495574..25495709,25495403..25495466,25495084..25495189,25494799..25494907
,25494207..25494323,25493972..25494095,25493812..25493888,25493683..25493735
,25492955..25493009,25492316..25492513

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25492316..25497604 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25492316..25497604 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGCTCCTCGGGGCTCCTCCGCCTGTACTCCCGAGCGGCTCGGCGGCGCCGACCAATACCCCGGCTACGGCGGCGGCGGAGGAGGAGGAGGAGGAATCCCTCCTCGAAGGCCACAAGGCAGCGCGCGAGTGGGCCCAGGTGCACGGGCAGCACGAGGGGCGCACCTGGGCCGTCGGATCAGGCGCAGCAGCCACGTTGGGCCAATCCAACGGACGAGATGCGCCCGCTCGGGCCGAAGACGGAAGCTTTGGGAAAGAGGCTTCTGCCATGGGTGCATCTCCCAGCCGTCCACTAGAACAATCACCATCATCTAGTGAAGGAGAGAATCACAGAGTTAAGTATGCCTCATATACTACGCAAGGATTTCGCCCGCACATGGAAGATGCACTTGCAGTTGAACTAGATCTAGATGCGACCACGTCATTCTTTGGTGTTTATGATGGCCATGGAGGAGCTGAAGTAGCAATGTACTGTGCAAAACGATTTCATACTATGCTTCTTGAGGATGTAGACTATATCAACAATCTGCCCAATGCAATTACGTCTGTATGCTTCAGACTTGATGATGATTTGCAACGATCAAATGAATGGAGGGAGTCACTTAATCCCTGTGCTAATCGCAATTGTCTCACTAACATTTGTGCTAATCTCCACCATTTCACAGAGGATTACGTTCCGCCGTCATATGAAGGTAGCACAGCATGTGTGGTAATCATTAGAGGAAATCAGATCATTGTTGGGAATGTTGGTGATTCTCGTTGCGTGCTTTCAAAGAATGGTCAGGCAATTAGTTTATCCTTCGATCACAAACCACACCATGAAGCTGAACGCGAAAGAATTCAAAGAGCAGGAGGACATGTATTTTTGCGAAGAATTCTAGGAATGTTAGCCACGTCCAGAGCGATTGGTGATTTTGCATATAAGCAGAACAGAAATATGCCTCCTTCACAGCAAATGGTGACATGTGTTCCTGACATTCGCGTCGAAAACATAACTGATGATACTGAATTTCTTGTCATAGCAAGTGATGGTGTCTGGGATGGCATGAGAAATAACAATGTTGTTCAGTTTGTGCGTCAGGAATTACGTCCGGGGGAGGAAAATCTACGCGAGACTTGTGAGAAGCTTGTTGGTCATTGCTTGCACTCAAATGACAACGCGACTGCCATACTGGTTAAGTTCAAGCCCATTGAGGAGGACCCCGATGAAGTTGCCAGTGCCAGGGATGAACATCAACACAACCCCGAGGGCGGTGATGAAAAACTTGACATCAACAATGACAATGACTAA</cdnaseq>

Protein Sequence

<aaseq>MQLLGAPPPVLPSGSAAPTNTPATAAAEEEEEESLLEGHKAAREWAQVHGQHEGRTWAVGSGAAATLGQSNGRDAPARAEDGSFGKEASAMGASPSRPLEQSPSSSEGENHRVKYASYTTQGFRPHMEDALAVELDLDATTSFFGVYDGHGGAEVAMYCAKRFHTMLLEDVDYINNLPNAITSVCFRLDDDLQRSNEWRESLNPCANRNCLTNICANLHHFTEDYVPPSYEGSTACVVIIRGNQIIVGNVGDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVFLRRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVRQELRPGEENLRETCEKLVGHCLHSNDNATAILVKFKPIEEDPDEVASARDEHQHNPEGGDEKLDINNDND</aaseq>

Gene Sequence

<dnaseqindica>1..254#1896..2031#2139..2202#2416..2521#2698..2806#3282..3398#3510..3633#3717..3793#3870..3922#4596..4650#5092..5289#ATGCAGCTCCTCGGGGCTCCTCCGCCTGTACTCCCGAGCGGCTCGGCGGCGCCGACCAATACCCCGGCTACGGCGGCGGCGGAGGAGGAGGAGGAGGAATCCCTCCTCGAAGGCCACAAGGCAGCGCGCGAGTGGGCCCAGGTGCACGGGCAGCACGAGGGGCGCACCTGGGCCGTCGGATCAGGCGCAGCAGCCACGTTGGGCCAATCCAACGGACGAGATGCGCCCGCTCGGGCCGAAGACGGAAGCTTTGGGTTGGTTTTACTACTTTTTGTGCCCCACCTCCTCTTGCATGCAAGGCTTTGGCTCCTCTCACCCACTTTTGCTTCGCAACCACAACAATTTTCACAAGTCACAAGCGCAGCGGAATCGCGTAGAGGTGAGGGCTTGATTTGATCTCTCTCCCACTCTCTCCTCCTCCTCCTCCTCCTCTGCTTTCCTCTGCTCCAAGACAATCGTGAGATTTCTTCTCTTCTTCAATGTCCATGTGTTTGTGTTGGTGATGCTGTTGCTAGTAGCCGCTGCTCTTCTAGTTCTTGCTGTTTCGTTTCGTTCGCCGTGGTCCTGTGGAGTACTTGATCGAGACCATTGGGTGTTGTGTTTGTCTTCGATCTTGAGACGATTCTGTGAGAGTTTTACTCTTGGTCTGGAATGCTGCGGCCTGTGTTCTTGCGTTGGTGTGTGTTGATGTTGTTGCGGTTGGTTTTGAAGTTGGTCTGTGTTCTTGCATTGGTATGTGTTGATGTTGTTGCGGTTGGTTTTGAAGTTGGTGGTGGTTTTCTTTGAGGAGGGAGGGTGACGAGCACCGAGGGCCATGGTGATCTCTTTCCCCTCTTTTTTCTTCGTTTTCTTGCTTGCTCTTGTTGTTGCTGTTCCTGCTGCTTTCGAAGATGGTGGCAGTTTTCTTGGAGGAGAAGGAGGTGACGAGCACCAACCTATGGTGATCTTCGTTGTCTCCTTTTATTTTCGATCTTACTTATCATTCTTCTCCACCTTGTTCCTGTTGTTGCGTCTACTGCTGCTTCCGTGTCGCTGCTGTTGCGGTTCGCATGGTCTCTGTTGGAGGAGGTGGTAATCTGTAATTCTGTATCTGTCCGTCTTCTTGCAACTGGATAGTGTTCATCAGTTCATGAGTTCATCCTTCATCGTAGCACCCGTTTCTACCTACGCATTTTCTTGATGTTTCTTTTCCTGGCGTTATCGATGTAAACATGGCCGCTCGATGATCTATATCTGCTCGTCTCAATCGTTTACTTATTTTGGTATGTTTTTCCAGATTCTTTCTGCGTGTAGGTGTGCTTTCCTCTCTTTTTTTCCCACACTGGGTTTTGACGTTCTGTTGATTCCTCTTATTCTTGTTGATTCTTGATGATGCTGTGCACGCGGAAACTCGGTGATCTTGATTTATAACCTGTCCGTTCTTGCTGTTGAGTGCCAGCGAGCAGTGTTACTCTGTTTTTCATGAAAGTACTTTTCATTCAGTTGATGTTTACATCCATAGATGTATGAGTCTCTTAGTTCTTACTTACTATCAAGCAATCAAGTTCAAGCCATCTTTATTTGCAGCTCACATTAAATGGTCTAACACTTGATGATGTTTCACTTCCCCAGTATGGTGTGAAGTGCGATTCTGTTAAGTAGTTTGTTACCCGGCACCAGGTGTTACTGAAATTTGAGTGGGAAATCTTAGCCTGTGATTATTTGTCCCCTTTCATATCATGTGCACTGCAGGCTGCTGCATTTGTTCTTGGCACAAACTTTGGAGTTTTTATTTTTGTTCTGAAATGCTGAAGCCATTTTTCATGGTCTTCTTAAGTCTTAGTGACCCTGATCAGTATTGAACAATGTTTGGTTCAACAGATAGTACAATAGTGTGTTCACATTAGTCCTTACAGGAAAGAGGCTTCTGCCATGGGTGCATCTCCCAGCCGTCCACTAGAACAATCACCATCATCTAGTGAAGGAGAGAATCACAGAGTTAAGTATGCCTCATATACTACGCAAGGATTTCGCCCGCACATGGAAGATGCAGTGAGTAATCTTGCACTCTTTTAACCAATTTTATGGCCATAAGGTGTTTACCTGTAAGTAAATGTGATCAAACAACAAGCTTGATTTGTACCTTTCGTATTATCTAGCTTGCAGTTGAACTAGATCTAGATGCGACCACGTCATTCTTTGGTGTTTATGATGGCCATGGAGGTTTGATCTTCATTCTCATCTTTTCTAACAAATGTCAAACAATTCATCTGTTAGACCACTTCACGCGTTGGTTAAAATATCATAGAAGTCACAATCCTCTATAAAGAAAGGACGGCGTTTCCTATTAGGAACATAATAACAGTTGATTCATCCTTCAATCATTCGTTCTCTATCTGTACAGTCATGCTGAGTTTTTTACCTTTTTCTATTCAGGAGCTGAAGTAGCAATGTACTGTGCAAAACGATTTCATACTATGCTTCTTGAGGATGTAGACTATATCAACAATCTGCCCAATGCAATTACGTCTGTATGCTTCAGGTTATTTTCTACATAATTATTTCATGTACTCTACATATTTTGTGCACTCATGTTTCTCAATAGTGGAAAACAGAAGGACAAGTGTTCATAATTGCAATCATTTTCTTGAAAATATAGTACCATTTGCTGGATTAGCAAACATGAAAATATGTAATCACCTGCCTTCTTAATTGCAGACTTGATGATGATTTGCAACGATCAAATGAATGGAGGGAGTCACTTAATCCCTGTGCTAATCGCAATTGTCTCACTAACATTTGTGCTAATCTCCACCATTTCACAGAGGTGATATATAAACTTCGTGGTTGTTCTTTACACATCCAACTGCATTAAAGTTAATCATGATCTTATTTCTAGTTATCTAGTGCACATATTCTTATCTGCAAGAAGTATCTTGAAGGAATGTGTGATATGGCTTCCATATTTTTCTCTCAAGATATGATGTGGAGTTCCGAGTGATATATTTCTCATACACACTCATCATATCAAGCACTTGTTTAATGTTTATGGAGTCAGAATCCAAAAGCTTGTTAAGTTCTTGTTGTACTTTAGTTGTTATCCTACTGCCCAAACTATGGTATTGTTTGATATGTCACTTTGTTGGACTCATCATGTCTTTCTTACATTTGTTCCCTTCTTTTATGAAGTATGGACATCATTTTTTTTCTCTGGTGGCATTGCACACCTTTTTAGATTTTTTTATTTCGTGGAACTATTGAATTGTTAGTTTTACACTTCAGCTGGATTGTTGCCCCCTCAGGATTACGTTCCGCCGTCATATGAAGGTAGCACAGCATGTGTGGTAATCATTAGAGGAAATCAGATCATTGTTGGGAATGTTGGTGATTCTCGTTGCGTGCTTTCAAAGAATGGTCAGGTGCGTGACTTGTTTCTTGTGAAATGTCTTATTGCCTGGATCTTCTCTCTTGCCAAATGCAATAAATTGGTGCCTAATTATTATCTTTTTGTTTTTCTGTTGTGTCCATAGGCAATTAGTTTATCCTTCGATCACAAACCACACCATGAAGCTGAACGCGAAAGAATTCAAAGAGCAGGAGGACATGTATTTTTGCGAAGAATTCTAGGAATGTTAGCCACGTCCAGAGCGATTGGTATAATTTTATCTTATTTTCTTTTGGCTGTTTGTACAAAATCTGTAGCATTGTAATTGACATTTTCATTACTACCATTGCAGGTGATTTTGCATATAAGCAGAACAGAAATATGCCTCCTTCACAGCAAATGGTGACATGTGTTCCTGACATTCGCGTCGTAAGTGTAACTATGCCATTTTAGATGACTATATATTTGTTTTCTTGGTCTGATCAGATGTCCTTATTTTTGTTAGGAAAACATAACTGATGATACTGAATTTCTTGTCATAGCAAGTGATGGTGTCTGGTAGGTCCTCCGCTATAAAATTAGTAAAGGTTATTTGTTGTTTTATGCTAGCTCCTGATTAAATAAATCTCTTGCAGAATATATCCACTCCAATGACAATTAACTTGCTTCTAAGACAGTATTGTTTTTTCCACAAGGGTTTGTACATTTGCTTTAATTAAAATTGGATGTGACCTGGACTGGTATATTATCTAGTTCACCACCATGTGTAGTTATGAATGTTTTTACGTGGTGAAGATTTTTGAATTCTTATTTTGAGTTAAATGTTATGTCCTTGGAGAGGCTGAATCTACTGAAAAGAGATACATCTGTCATTCCCTGCACTAGCTGGGGTTTTATAGTATTCAGACAATTATTTAATTTGATGGTTTGGTATCTGACAGGCTTAATAAGTTGGAAATGACTCCAACGACCACTGGTCACCTTATATATCTGACTTATACTGCAAGATCATTCTTCAAGAACCATCTCACTAAATGAAACATTTACACCTGTAGGAATTGTGCTAAGATGTATCAGTGTTAATATTGATAAATGACAGCAATCTACCATATATTATCACAATCTGATATACGTTTCCCATTGGCAATGCTATGTCTCTTCCTTTTGTTTCTTCTACAGTTTTATTCATATTCACATAGTAAACTTAAATACATTTTTTTTTCTCTTTCAGGGATGGCATGAGAAATAACAATGTTGTTCAGTTTGTGCGTCAGGAATTACGTCCGGTGAGTCCTTCCTATTTTTCTCTACATGTCATGAAGTAATGCATTAAAAAAACACATGGCTTTTGTTTTGAAATTATGTTAGCAGGCTGGTTCTGTGATGAGAACACGAAGTGTAGTAGTTATATGCTTATTTAGTTGGTTGTAAGAACCTTGTTATCCTGGACTCCACCAAAAGCCGGGTTGATATGATCCGTTTGTCTAAAAAACGCATCCTCTCTAGAAGTTCCTTTCATGCATGCACTCTTAAATTAAATCAATGAAAGTTTACTCCAGTTCTGAACACATGTGCATGGATCTGCTTCGTTTTGTTATCAAGAGATTGAAATCTAAAGTCTACATATGAAGATCGTAGGATGTTTTTCGCTGTTCATTCATTTGTTGCTAGAATTGTTATTATGCCCTTTGGCCTGTGCCTTGACGTATGCATGTTAACCAACACAGGGGGAGGAAAATCTACGCGAGACTTGTGAGAAGCTTGTTGGTCATTGCTTGCACTCAAATGACAACGCGACTGCCATACTGGTTAAGTTCAAGCCCATTGAGGAGGACCCCGATGAAGTTGCCAGTGCCAGGGATGAACATCAACACAACCCCGAGGGCGGTGATGAAAAACTTGACATCAACAATGACAATGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006083

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006083&oldid=59635"