Os12g0535400

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Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0535400| Description = Hypothetical protein| Version = NM_001073466.1 GI:115488893 GeneID:4352417| Length = 3886 bp| Definition = Oryza sa...")
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Gene Name

Os12g0535400

Description

Hypothetical protein

Version

NM_001073466.1 GI:115488893 GeneID:4352417

Length

3886 bp

Definition

Oryza sativa Japonica Group Os12g0535400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21477359..21481244

Sequence Coding Region

21479681..21479745,21479836..21480027,21480820..21481048

Expression

GEO Profiles:Os12g0535400

Genome Context

<gbrowseImage1> name=NC_008405:21477359..21481244 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:21477359..21481244 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgccaaatccactggcaggccgtcgatccggcgtttggtctccccccggtggatccgaccgctcagagcctcgccggcgccgaggacagcgagctcgcgcggcggctcaggggccccgccgtggccatggggaagcgcctcagcttcatgaacgcgtacctcgccgaggactgcaaccccgtcaggtgctgggtcatcaccgccgccgtcgcgttcgtcacgctcatcgtattaggtgtagggagtgttgatgataccccagtagagctgccaaagaaactctacataggtcccccaagtgccaaaacaattcaacttcctgatggaaggcatctggcttataaagaacaaggagtcacagctgacagggcaagattttcactgattgctcctcattattttctttcgtcgaggttagcaggaatcccaggaatcaaaccatccctcctggagaaatttggggcacgacttgtgatcattaattaa</cdnaseq>

Protein Sequence

<aaseq>CQIHWQAVDPAFGLPPVDPTAQSLAGAEDSELARRLRGPAVAMG KRLSFMNAYLAEDCNPVRCWVITAAVAFVTLIVLGVGSVDDTPVELPKKLYIGPPSAK TIQLPDGRHLAYKEQGVTADRARFSLIAPHYFLSSRLAGIPGIKPSLLEKFGARLVII N</aaseq>

Gene Sequence

<dnaseqindica>1500..1564#1218..1409#197..425#gcgtcgcctcctcgccctcctctcgccgccgctgcaccgcccccgactctctccccagtcaggtcacttcatctaccagcgaggagaccaggggcatcgaatccggtgaccacctcctctccgcaggcgattccggctgcccggacaaaagggtcgtgagccaccaccaccatcttctccaccctgcttggtgtagtgccaaatccactggcaggccgtcgatccggcgtttggtctccccccggtggatccgaccgctcagagcctcgccggcgccgaggacagcgagctcgcgcggcggctcaggggccccgccgtggccatggggaagcgcctcagcttcatgaacgcgtacctcgccgaggactgcaaccccgtcaggtgctgggtcatcaccgccgccgtcgcgttcgtcacgctcatcggtaatcccccgctgatctctcaccccccctcccccgatcttctcttccttgcgtgcgagtgaggctctgactacagctcagcatgcagtttggtttatgccgtcgtgcatcacgatgtatgatatgagcgtgcacgtttagtgttcagtcattagaggggatggatctaactaaccgtttggtgctctttttttcccctgaaattttgtttggatttagaatcaatctgtctctttatgctgcgtttctgttgtgaacgctactctagatatatattggttaaagcgtgtaattatttcaaggagatttttttttggattgtgggatccatgccttgtgcgcttgtgttcatgccttcatggccatggggtacaatgcatggcctacgggcagtttgaaattcatgacaggtcaaccatagtctaatattgtggtcattggtcagtcaattgttttactattgagtcaagctagctgctttttttttgctgtattgatattactattttggtgccaacagattgcttgccaggtggattctttttgccctcttatttttgagttttatggcacttggttgcttatatgcgaacttgatgcatgctagcatgtagaatttctacccagaagtgctcctttaccctcttttacatgctacacattgtacaatcattttgtcaatgcactatgtacttcaattgatttgtgaaaaatgcgaaatccaagaaaacaatttcttaatgtagggatcaattttttatcgcttgattaacaggaatattttgtatgcagtattaggtgtagggagtgttgatgataccccagtagagctgccaaagaaactctacataggtcccccaagtgccaaaacaattcaacttcctgatggaaggcatctggcttataaagaacaaggagtcacagctgacagggcaagattttcactgattgctcctcattattttctttcgtcgaggttagcaggtaagaccaaatgttgcattgtttggtttaacgtatcagcacagcatgacagcattacatatttgatctacatggtttcttcgtgtacaggaatcccaggaatcaaaccatccctcctggagaaatttggggcacgacttgtgatcattaattaacactgtaaaaccaacactatgaaaaatatgggtaaatcatctactatccaggctttcttatgatctcatagtacctcctcattttttttctgtcagctgtagtgtgtacatctgttgtttatgcttgcatcatcatctcctctgaggcatctatagggttggcatgccaaaaataactcaaactgcttgagttcatataattcagtgtgccttctaaaattgaagaataacctttacatttagcttttgggatagccagctaggtagcgcctaggtccgtgggtggtttgaaatacattcccaaagaaaaagcatttttagcactacaatttaggtgccttcatgaaaaagtctcatctgatcggtacaatctacaggcctagacttttagagagcattaatgatttacaattactgctgtcacatgtgacaatccattgtttctaggttcacttttgccattttttatctatgtgaggttcagcagcatgtaaggagccttggcactgctattacaggtgtgttgagtcggattgtattatatctgaatctcacaaaaaacattgcagaccatcatattttaagacatatgcaagtatatatcatcctatgctcctatgaaatatgtatctatggaatgtgggacactattctttttgttggatataggatagtttacttaccaaatggaagtcaactctgttctaatttaaaattcactgttaatttcattctttatgaatatcacgtggtgctgcgtatatgtaatggttcccaatgtgtaataattatattggcaaaaggtgatatttgtagatatacaaaaagtaaagcttagttaggtgacttcattctttcaatagatagcttttcttttcattttctgaattgaggtcatgagggacatgaatctataaatgtcttgccaacagtctactcttgctgttatcacttaccagggcactcagtcctactgtgctacactgctatgagttcttcttttatcagactgctggctacaagccataacatttgggtttagcatttccattaccttataagctataacaggatggatatatcatatatgtatcatatacatatatatataggcaacagcttgcccaaactgttgtctagcatggtaaaggtacattcttagaaatgtgcaaatgcctgataatatttggtcatatatgttttgtactgaaggagataatccacatcctttttatatatgtatatatcagtaaaataaatagtaatacttcataccacacctaatgtatctattatttcttattttgcaactatatgcctttagcctttgcaatttgtagatggacgagctcatgaacacaaatgcaagtatgaacagttggggagcctcatatgtgagataacgactaatccggaggatatgttttttttcttagtttttttattcttaatgtccacattttgtaagaattctccactaacatgctctgttgtgtgattctcagttctatcttgtggtcacaacactaactgtcaactgctcactcctctcttggctcccatattagaaccaacactatttgttgacactttaacatttggtgatatttatcatgtgcactgtttaatttatgaaatttgtaagacaattctatttcatcaattactgtttctccttgctcatttctaatatgtaaatgatccaaatacatgctatataaaaaaattatatgctgttaaatttatttctcctctgatattggacgggtgcagcgaagcgcgcagttatttctagtttgtttcaaatgccccgttgctagatttgcctggtgtatttgtagagacgcccttggccagagtagaattcctcatgattttgatgactttttctgcttggttctggggaaaacaggcttaaaaaatctagagttggatgccttcttttagctgctttatgttggaattctttggtcaactagacatgacatggtcttcagggataagatggtttcctcacctctaattattcttttttcgtttgattggcttactgttgtagtggaaatcatttctgaagcctgatgacgttgctactctggagtccatggcggcggcattacaagatgctgtcaacggtcttcgtccctcgcgagctggaataggctaacatcggtgttaccggtggtttagttttgcttttggcttttgctggcattctggagtttggagcctgggagcaactactataattgatgtactgtccttaaaagcatcatatacgattttctttttaacacgagtgtcacgtacgattgagtgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0535400, RefSeq:Os12g0535400