BGIOSGA006113

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Revision as of 02:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006113| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006113, complete gene.| tag = OsJ_073...")
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Gene Name

BGIOSGA006113

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006113, complete gene.

LocusTag

OsJ_07385

Ensembl Transcript ID

BGIOSGA006113-TA

Ensembl Protein ID

BGIOSGA006113-PA

Length

5486

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25019185..25024670

Sequence Coding Region

25023795..25024670,25021457..25022921,25021185..25021301,25020947..25021089,25019796..25019861
,25019185..25019436

Genome Context

<gbrowseImage1> name=IndicaChromosome02:25019185..25024670 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:25019185..25024670 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGAGATGGTGATGACGAAGAGAAGAAGAAGTGCAGTCGTCAAGACATGAAGAAGAACCTGCGAAATGATGCCGACGAAGAGAAGAGGAAGAGCAGTGATGACATGCGAGATGGTGATGACGAAGAGAAGAAGAAGCGCAGTCGTCACGACATGAAGAAGAACTCGCGAAATGATGCCGATGAAGAGAAGAGGAAGAGGAAGAGGAAGTGCAGTGATGACCTGAAGAAGAGTGTGGTAAACGATGCCAGCAAAGAGGCGACGTCACACAGTGACTGGAGAAAGAATAGGAAGGCTGGAAGCGATTCTGAGCAAAGGGGGAAGAAGTTGTTGAATGGCGACAAGAAGGCTAAGAGTAGGAAGGTGACCACTCCATTCTTTGAAAAGATGCGGAAAATAAAAATGCAGCGCACGAGCAACCAGAATGGTGAGAAGAATATGAAGAGTGACGGTGACAGCTATAAGAAGACAGTGCCGCTCTCAGTCAACAAGGGTAAGATGGAGAAAGATGGAACGAACAAGAGGACTTTGTCTAATACACTTGTTGCAAAGGAGAGGAAAATGCGACCTAGTGACAGTATGGAGATGAAGATGAAGAAAAAGAAGCGGGATGCATCATTCGTTCAACCTGATGAGAGGACAGCTCAGACATTTAGCACTAAAAACAAGGAAAAGAAGAGGAAGGCGCCATCTACACCATTGAAGAGGGAGCAGAAGGAGCGAGTGGCTAGCAGTGACAATAAAAAGGAGACGAAGAAGGCTTGTATTGTTGCTATAGGAAATGAGAAAAAAAATTGTAGGGATGGCAAGAAGAAGAAAAGGAAAGCAGCCTTCGCATTCTTCAAATTTGTGCGCGACGAGTTCGAGGAATTACTGTTCATACCACCAGCAGTTGCACCCAGCCTTAAGGATTTAATTGATCGCCATGTATATCTTGAAGACTCAGAGGGGAAGTGTTCAAAGATCAGGCTATCGGTGGTGGATGGTTCCCTAGCTTTTTATGAGGGATGGAACAGTTTCGTTTCAGAACATTGTATTAAGTGGGGTGAATTTCTATTATTTGAGTACACACCAGAATCAACATTTTCTGTGCGGGTGTTTGGTATTGATTCTTGTGAAAGACTACATTTCAGTGTCAAAAGCGGAGGAAAAGGTGCTGTGAAGAAAAGGAAAGAAAGGCATACATTATCTGATGATTTGATATCACATTATAATGGTCAGTATCAGGACTCTGAAGACATACACGATGGCCCCAATGTTTCTGGTGAATCTCCTAGGAGCAAAGAGCCCAAAATAACAGTTGATGCTGAGATTGGTACCAGGAATCTAGTTGCTAAATCTATAAATGCAGCTTCCGAAATACAAGACTCTGAAAGAGTTGAAAGTGGGATTGGATATGGATCCTTAGGGGCACTAGGTAATAAGGTTAGAAATTTAAGCAATGGGGAGTGTGATACAAGGAGTGACTCTGTGTTCTGTATCCAAGAAAAAACAAGAAGATCTGAGGTTATTATAATAAGTGATGAAGCTTATTCAACACAAGTAGACGAGGATACCATGAAGCAAACAGCACCAAGTGAAGCTTCAGAAATACATCATGTGACTATCAATACACAAAAAGACCTTGAAAGAGTTGTAGATGGTGTTTGTTGTGAATCCTCAGTAGCACTAAACAATAAGATGGGAAATTTGATCCTTGGAGAGCCCCAAAACAAGAATATTTCACCAGCATGTAGCACAGAAAAAACAAATGGATCTGAAATAACTCCAACCACCGGTGCAATTCCTTTAACACAAGAAAATATTGATACGGTGAAGTTAAATACACTTTCTTGCTTCGAGGAAGACAGAAGCACAACAAGAGAATCTGAACTTGCTGCTGCTATTCCAACAACATCAGAAACTCATGATTCAGATAAAGATTTAGGACAGAAACATCAAAGGAATTCCGTTCAAGTAAATTCTATCATAGCTGTTGACAAATATCCTAATGATAGTGAGATGAATATTAGTGGAAATATTTTCAGAATATATGAAGCTCCAGCGGGTACTCGGTGCTTGGAGAAGTGGAAAAGGGGTATTGTGAACGGTCGAGCAGCTCTTGATGACATTGGACAGGTTAGACCTGAAAAAACACAAAAAGCTGGAGAGAAGTTAGTTGGTAATTGTGGTGCAATGGGAGAAAGTCCAGTTGATCTACGGATAGAGTCTGATGTTACTGATACCTGCCTCAAACCAATTCTCAACATACCTATTGAAGAACTCTCGATTCTTGATAGCGTATCAATATCCAAATGCGGACGTAGCAGGACAGAGGTCAACCATTTGTTCAATCAAAAAGGAGCTACTGTTCAACTGCAAACAAAAAAGGAGCCATTGAAACCAACTGGTAGCAGCGGAAATAGAAAGGGGGACAAAATTGCAGTGTCTGTCAACCGTGTATTTGCTCATCAATCAGAACTTCAGATCCCCCAGCAGGAAAATGGAAATTTTACCAGTTGTGTAACCCCAGTGGCTCTGCTGCCTGCTAAGGCTGAACTCCTGGATCTGGATGATCATTCCCTTCAATTCTGCATCCCTTCTACCATTCAGAAATGGCTTGTTTTCAGCTACAGTGTTGTGCAATGGATGCAATTTGTTGAGTTCATGCTGATTGCAGTGAGGGCGGAGTTGCCCAAATCGCTTCCAATCACTTGTCGGCAAAAAGGAAGGTATGACCGGAACGTCGTAATCCTCAAGGATCCCATGAGGAGGCTATGGCCGGTCTTCTACCATGACAAACCGGTCTTCGTAGGCTTCACCGCGGGCTGGAAACCTTTTGCCGCAGCAAACAACCTCCAGGCTGGGGATGTCTGCAAGTTTGTGAAAGAGATGGACGAAGATGAGCTTGCGTTCCAGGTTTATATCACAAGAAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MRDGDDEEKKKCSRQDMKKNLRNDADEEKRKSSDDMRDGDDEEKKKRSRHDMKKNSRNDADEEKRKRKRKCSDDLKKSVVNDASKEATSHSDWRKNRKAGSDSEQRGKKLLNGDKKAKSRKVTTPFFEKMRKIKMQRTSNQNGEKNMKSDGDSYKKTVPLSVNKGKMEKDGTNKRTLSNTLVAKERKMRPSDSMEMKMKKKKRDASFVQPDERTAQTFSTKNKEKKRKAPSTPLKREQKERVASSDNKKETKKACIVAIGNEKKNCRDGKKKKRKAAFAFFKFVRDEFEELLFIPPAVAPSLKDLIDRHVYLEDSEGKCSKIRLSVVDGSLAFYEGWNSFVSEHCIKWGEFLLFEYTPESTFSVRVFGIDSCERLHFSVKSGGKGAVKKRKERHTLSDDLISHYNGQYQDSEDIHDGPNVSGESPRSKEPKITVDAEIGTRNLVAKSINAASEIQDSERVESGIGYGSLGALGNKVRNLSNGECDTRSDSVFCIQEKTRRSEVIIISDEAYSTQVDEDTMKQTAPSEASEIHHVTINTQKDLERVVDGVCCESSVALNNKMGNLILGEPQNKNISPACSTEKTNGSEITPTTGAIPLTQENIDTVKLNTLSCFEEDRSTTRESELAAAIPTTSETHDSDKDLGQKHQRNSVQVNSIIAVDKYPNDSEMNISGNIFRIYEAPAGTRCLEKWKRGIVNGRAALDDIGQVRPEKTQKAGEKLVGNCGAMGESPVDLRIESDVTDTCLKPILNIPIEELSILDSVSISKCGRSRTEVNHLFNQKGATVQLQTKKEPLKPTGSSGNRKGDKIAVSVNRVFAHQSELQIPQQENGNFTSCVTPVALLPAKAELLDLDDHSLQFCIPSTIQKWLVFSYSVVQWMQFVEFMLIAVRAELPKSLPITCRQKGRYDRNVVILKDPMRRLWPVFYHDKPVFVGFTAGWKPFAAANNLQAGDVCKFVKEMDEDELAFQVYITRK</aaseq>

Gene Sequence

<dnaseqindica>1..876#1750..3214#3370..3486#3582..3724#4810..4875#5235..5486#ATGCGAGATGGTGATGACGAAGAGAAGAAGAAGTGCAGTCGTCAAGACATGAAGAAGAACCTGCGAAATGATGCCGACGAAGAGAAGAGGAAGAGCAGTGATGACATGCGAGATGGTGATGACGAAGAGAAGAAGAAGCGCAGTCGTCACGACATGAAGAAGAACTCGCGAAATGATGCCGATGAAGAGAAGAGGAAGAGGAAGAGGAAGTGCAGTGATGACCTGAAGAAGAGTGTGGTAAACGATGCCAGCAAAGAGGCGACGTCACACAGTGACTGGAGAAAGAATAGGAAGGCTGGAAGCGATTCTGAGCAAAGGGGGAAGAAGTTGTTGAATGGCGACAAGAAGGCTAAGAGTAGGAAGGTGACCACTCCATTCTTTGAAAAGATGCGGAAAATAAAAATGCAGCGCACGAGCAACCAGAATGGTGAGAAGAATATGAAGAGTGACGGTGACAGCTATAAGAAGACAGTGCCGCTCTCAGTCAACAAGGGTAAGATGGAGAAAGATGGAACGAACAAGAGGACTTTGTCTAATACACTTGTTGCAAAGGAGAGGAAAATGCGACCTAGTGACAGTATGGAGATGAAGATGAAGAAAAAGAAGCGGGATGCATCATTCGTTCAACCTGATGAGAGGACAGCTCAGACATTTAGCACTAAAAACAAGGAAAAGAAGAGGAAGGCGCCATCTACACCATTGAAGAGGGAGCAGAAGGAGCGAGTGGCTAGCAGTGACAATAAAAAGGAGACGAAGAAGGCTTGTATTGTTGCTATAGGAAATGAGAAAAAAAATTGTAGGGATGGCAAGAAGAAGAAAAGGAAAGCAGCCTTCGCATTCTTCAAATTTGTGCGCGACGAGTTCGAGGAATTACTGGTGTGTGCAGATTTCTAATTCCTACACATACTTGATTATGTCTGTTGCTCATAAGCTCTTCTTTAATTAGCTATCCATGACCTTGAGACTTTTATTTGTGCTTGAAACTTGGAAGGTACTTGGAAATTAATATCATCTAATATTATCGGTCATTGGTTAATTTAAAGGTGACCATATGCTGTATTCTTCTTTCTACAATCCTGCCTGCCATTGACAACCAGGACTAAATCAACTACACAGAGGAATGATGAAGAGGCCTTGTACGAACAGAGTCAGTTTCAATTTGACCTTGTAAATTATTCAGTTACATCCTTTTTACCATTCTTGAAAAGGAGCCAAGAGCAAGAGGTGCCAAAGTTTATAACATCGTGTGGAGGTTTTCTCTCATCTTTGGAGACTTATGTACCTCTCCAGCTCTCCTTGGAGTGGTACCTCTTGTAACCTTCAGAGAATCAGAAAAAAACCCAATGAATGTATGGCCTGTTCTCCGTAGTGCATCGTTATGGTGCTGTAGTAGCCTTTTGCTGCCATTGACATGGCCATTAAGCAACTAGTCATCTTTCTTGTTGCGACCATAATGATAAAAAAATATTTTGGCCGAAAGGATCAAGCAGTTATGTTTTCTTTTTCTCTCTGTTTACATGGATGCATGAAGTATCCAACTTTCTGTCTTATTTTTAAGTTGGCACCTGCCTCGCTGCTTAAATATCTCTCCATAGCTCTCAAGCACCCTAAAAAGTCTCCGTAATTTCAGCTCTGTTTTTTCTTGTTCATTTTAGTGTCTTTTTTGTCATTGTTTTTTCTTCTTGTACTGTACCATGATGATTATCCTTAAATATTATATGCACATAATGTTGATTTATTCTTGTGCAGTTCATACCACCAGCAGTTGCACCCAGCCTTAAGGATTTAATTGATCGCCATGTATATCTTGAAGACTCAGAGGGGAAGTGTTCAAAGATCAGGCTATCGGTGGTGGATGGTTCCCTAGCTTTTTATGAGGGATGGAACAGTTTCGTTTCAGAACATTGTATTAAGTGGGGTGAATTTCTATTATTTGAGTACACACCAGAATCAACATTTTCTGTGCGGGTGTTTGGTATTGATTCTTGTGAAAGACTACATTTCAGTGTCAAAAGCGGAGGAAAAGGTGCTGTGAAGAAAAGGAAAGAAAGGCATACATTATCTGATGATTTGATATCACATTATAATGGTCAGTATCAGGACTCTGAAGACATACACGATGGCCCCAATGTTTCTGGTGAATCTCCTAGGAGCAAAGAGCCCAAAATAACAGTTGATGCTGAGATTGGTACCAGGAATCTAGTTGCTAAATCTATAAATGCAGCTTCCGAAATACAAGACTCTGAAAGAGTTGAAAGTGGGATTGGATATGGATCCTTAGGGGCACTAGGTAATAAGGTTAGAAATTTAAGCAATGGGGAGTGTGATACAAGGAGTGACTCTGTGTTCTGTATCCAAGAAAAAACAAGAAGATCTGAGGTTATTATAATAAGTGATGAAGCTTATTCAACACAAGTAGACGAGGATACCATGAAGCAAACAGCACCAAGTGAAGCTTCAGAAATACATCATGTGACTATCAATACACAAAAAGACCTTGAAAGAGTTGTAGATGGTGTTTGTTGTGAATCCTCAGTAGCACTAAACAATAAGATGGGAAATTTGATCCTTGGAGAGCCCCAAAACAAGAATATTTCACCAGCATGTAGCACAGAAAAAACAAATGGATCTGAAATAACTCCAACCACCGGTGCAATTCCTTTAACACAAGAAAATATTGATACGGTGAAGTTAAATACACTTTCTTGCTTCGAGGAAGACAGAAGCACAACAAGAGAATCTGAACTTGCTGCTGCTATTCCAACAACATCAGAAACTCATGATTCAGATAAAGATTTAGGACAGAAACATCAAAGGAATTCCGTTCAAGTAAATTCTATCATAGCTGTTGACAAATATCCTAATGATAGTGAGATGAATATTAGTGGAAATATTTTCAGAATATATGAAGCTCCAGCGGGTACTCGGTGCTTGGAGAAGTGGAAAAGGGGTATTGTGAACGGTCGAGCAGCTCTTGATGACATTGGACAGGTTAGACCTGAAAAAACACAAAAAGCTGGAGAGAAGTTAGTTGGTAATTGTGGTGCAATGGGAGAAAGTCCAGTTGATCTACGGATAGAGTCTGATGTTACTGATACCTGCCTCAAACCAATTCTCAACATACCTATTGAAGAACTCTCGATTCTTGATAGCGTATCAATATCCAAATGCGGACGTAGCAGGACAGAGGTCAACCATTTGTTCAATCAAAAAGGTGGAAGGGTGCTACTTCTCATAATACCTATGATGTCTGAAAGCCTGAAACTATTTTTATTTCTCAAAAGCCTGAAACTAACATTTACAAAGTTAGCTTGTTTAGTTTGAATATAATTTTTATTTACAGCGTGTACTGAATTGTCTATTTGGTAGGAGCTACTGTTCAACTGCAAACAAAAAAGGAGCCATTGAAACCAACTGGTAGCAGCGGAAATAGAAAGGGGGACAAAATTGCAGTGTCTGTCAACCGTGTATTTGCTCATCAATCAGGTGAACTTACCTAGTTTATTTCATTGTAAAATTAAGGAGAGGCTGACCAATTTCATTTTGTGTTTCTTGTTGGGCACTCAAATTCACCCATGCAGAACTTCAGATCCCCCAGCAGGAAAATGGAAATTTTACCAGTTGTGTAACCCCAGTGGCTCTGCTGCCTGCTAAGGCTGAACTCCTGGATCTGGATGATCATTCCCTTCAATTCTGCATCCCTTCTACCATTCAGAAATGGCTTGTGAGTTGTTTGTATCCCATGGACAATTTCTTTTGCAGCTCATTAGTATTTTATTAAAACAAGGGCAGAATAATCCATCATATCTGCTTTCATGGAATCAAGGGATAGAAAAAGAGGACTTTTACGGTACTCCCTCCATTCCAAAATATAAGGCATAACCACTCATAACTTAAAGACCAAGAAATAATTATTATCATCTTGTAGTTTGGATCATCCTAATAAATACAATGCATGCATCCAATAGAATTAGAAAACATGAGAGTGGATGATTTAAAAAAGTAATAATTTAATGGAGAAGATGCTATAGTTAATTGCCTACATGCATGCATGCCTTATATTATGGAACATCTAACAAAAGTGGTTGTGCCTTATATTTTGGAATGGAGGGAGTACATTGTACTGCAAGTATATACTAGCAGTATATAGAAAAAATGCCACACCAAGAGTGAAAAATAAGGACTTGCACTTTTGGATTGCGATGGATCTACCCATCTGCAACGTAAGGTGTCGTGGTCCGAGTCCATGACGAGCAAACACCGCTGGAGGATAGCTGGGTGGTGTTGGCTGCTAGCCGCTAGGTATGAAGGGAGGACTTAGGTTGGGATGAAGAACATTGAGTCAATATTAAAGAGTCGTATAAGTTGTACAGTTGTATTTTCAGAAATAGGTGCAAGAGTTATATAAGGAGTAGAGTTCTACTTTCAAATACAAACATGAATTATTAAAATATTATCTAGCAGTGCAAAAAACCATAGAAATATAGTTTTATAAAATACTGCTAAACAATTACTCCCTCCGTCCCATAATATAGCAACCTAGTACCGGATGGGACATTTTATAGTACAATGAATCTGGACAGGAGGATGTCTAGATTCATTGTACTATGAAATGTCACATCCGGTACTAGGTTCCTCCTGTCCAGATTCATTGTACTATGAAATGTCACATCCGGTACTAGGTTGCTATATTATGGGACAGAGGGAGTAATAAGTTAATTGCCAAGATGCAATCTTAGTGGCCATGTCAGCAGAAACCCAATCATATATCTCTAGATTGTAATGCGCCACCTTATGCAATTCGTGAAGGTTTTCAGCTACAGTGTTGTGCAATGGATGCAATTTGTTGAGTTCATGCTGATTGCAGTGAGGGCGGTGTGTTTGGATTGGAAACATCTGTTTATTATCTAGGCCACATAAAAAAGCATCACTCCAGAATAGCTCATTGCTGGTTATGATTGTATTGTTGAGGCTTGAATTCGTGTGTTTTCTATTTGTCTTAATTCGTTTTAGGCCGCTGTAAAAGATACCCCTCTACTAGTATCACAGTAGGTCAGTAGCTACTTGTTCTTGGGCATACTCCTCATCTACTAAGATCACATAAGGAATTGATGCAGCATAAAACTTTAGTTTTGACTTACACTTGCCTATAATAACGCTATAAAGCTCCTGACACTGTTGATGAGTATGGCAAGCCCATTGACAACTGCTCTTTCTTTGCTGTCTTTGTTCAGGAGTTGCCCAAATCGCTTCCAATCACTTGTCGGCAAAAAGGAAGGTATGACCGGAACGTCGTAATCCTCAAGGATCCCATGAGGAGGCTATGGCCGGTCTTCTACCATGACAAACCGGTCTTCGTAGGCTTCACCGCGGGCTGGAAACCTTTTGCCGCAGCAAACAACCTCCAGGCTGGGGATGTCTGCAAGTTTGTGAAAGAGATGGACGAAGATGAGCTTGCGTTCCAGGTTTATATCACAAGAAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006113