Os12g0536000

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Revision as of 10:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0536000| Description = Similar to PE-PGRS FAMILY PROTEIN| Version = NM_001073469.1 GI:115488899 GeneID:4352420| Length = 2878 bp| Definiti...")
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Gene Name

Os12g0536000

Description

Similar to PE-PGRS FAMILY PROTEIN

Version

NM_001073469.1 GI:115488899 GeneID:4352420

Length

2878 bp

Definition

Oryza sativa Japonica Group Os12g0536000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21509122..21511999

Sequence Coding Region

21511099..21511207,21511588..21511952

Expression

GEO Profiles:Os12g0536000

Genome Context

<gbrowseImage1> name=NC_008405:21509122..21511999 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:21509122..21511999 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccagcggcggaggcggtggagaggagaggagaggggagaggggggaagcaaagcgcgagcggcgatggcggcgaggaggagcagggtggcgttcgtgctggtggacgggatcggggacgtgagcatcccgtcgctccgggggcggacgccgctggaggcggcggcggcgccggggctggacgcggtggcggcggccggggtggcgggggctcatggaccccgtcgagccggggctcgcctgcgggagcgacacggcgcacctctccctcctcgggtacgacccccgcgtgtactaccgcggccgcggcgcgttcgagtccatgggcgccggcctcgccatggcccccggcgacatcgccttcaagtcaaactttgctacgttggatgaaagcacggggatcattgtcagcagaagggcggatcgacactttgaggaggaaggcccgatactctgtgctgcattggatgggttga</cdnaseq>

Protein Sequence

<aaseq>PAAEAVERRGEGRGGKQSASGDGGEEEQGGVRAGGRDRGREHPV APGADAAGGGGGAGAGRGGGGRGGGGSWTPSSRGSPAGATRRTSPSSGTTPACTTAAA ARSSPWAPASPWPPATSPSSQTLLRWMKARGSLSAEGRIDTLRRKARYSVLHWMG</aaseq>

Gene Sequence

<dnaseqindica>793..901#48..412#gaagagagtgaaaaaaaaaaaaagcaaaagcggcgacgccacactagccagcggcggaggcggtggagaggagaggagaggggagaggggggaagcaaagcgcgagcggcgatggcggcgaggaggagcagggtggcgttcgtgctggtggacgggatcggggacgtgagcatcccgtcgctccgggggcggacgccgctggaggcggcggcggcgccggggctggacgcggtggcggcggccggggtggcgggggctcatggaccccgtcgagccggggctcgcctgcgggagcgacacggcgcacctctccctcctcgggtacgacccccgcgtgtactaccgcggccgcggcgcgttcgagtccatgggcgccggcctcgccatggcccccggcgacatcgccttcaaggttggggatttgggggggcactggattatacgagatgccatatggaattatttacagtaatctagtctcctagttagttagttagttagtgatggcttggatcgtcgcgtgtattctatttctaagattcctttgttgctttcgcatgatgactagttaaaagtggcttagatcatagcgtgttctcgaaatggcaatactaagttgagctcagttttgtcagaacttgtgctgtgtttctaagttaatttagtcagtaatgctgtaatggctcagatcatggaatggcagtttgaagccgtgtggtatgaaaagaagcattattgggactgttgaatgtattagtttgtggctaaatttcaagcataacttgtttgcagtcaaactttgctacgttggatgaaagcacggggatcattgtcagcagaagggcggatcgacactttgaggaggaaggcccgatactctgtgctgcattggatgggttgaagctcccatcgtttcctgaatatgaagtgagagtcaggtgcaacatccagtcctgttcctcatgggcactattgcaccgaaatgttcttgctgtttcttgttagcttattgcagtaacttaacactgctgctctgcagatatgctactgaacacaggtgtggtgtggttgtgaaaggaccgaggctgagtgggaacatttctggaactgatccattgaaggacaaccgcttgcatctaaaggctgaacctttggatgattcagaagaagctaaaaacacggcagctgtggtcaatgagctttctaaggagattacacgtatactggtgtcccatcctatcaatgcacagcgctctgccgaggggaagaacattgcaaatgttgtgttattgcgaggctgtggtatccggattgaggttagtacaaatgacttaatattagccttgtttgccatttctcatttctgaggctctctggaggttagcaaataaaaggaaaaggaagactttgcttccccgcggagctcttccttctctgcactgtgttgttgaagaatataaagataagcacagtccatatctgattgttaagttttcattttaagcatcgggacctttgaggttttagcaacttaagcttaaggcatcttgttctgttagttttgttacagctttcttatataattctatatgaaagaaatatcagtgcattaaatggttagaagaaatgatttttttccttttatttgaccatcgtagtacttataggaaattaggaatgcagttttgggtagactttccattggcttgtacaattttctgataattactttcagcaaacatattcggttgtcaaaacaaaattaagaaagaagtgaggttttgcatatcttgttgttctggaaatagacagtactgaaacctcttttcaatctttttgttgaagtgtcatgtggctctgtcaggttcctgccttcgaaaccaagcatggacttgcaccatgcatggtggctcctacaaagatcatagctgggctggggctctcactgggcattgatatccttgaagcacctggagcaactggagactatcgaactctcttgacttccaaagctaaagctatagccaaggcactgtctgctcctctggatacgccacctcgtgtttttgtgcctggagaggatgaatataaatctggaaaggaaaatggatatgactttgggttcttgcacataaaggtgaaagtacaattctggttctttctgaacttatatttaactgtgtgatgctgatcgcttcatttatatcgtttattcaggccatcgatgatgccggtcatgataaggctgtcaagcttaaggtactaggcctagaggctgttgatcgggctatcgttcagcttgcaaggctcctgtgggaagctgaaaagtctgggaaataccagtatttcctttgtgtcaccggagaccactctactccagttgagtacggtgaccacagttttgaacccgttccttttgtgttgtgccgacttagagatttcgtaggagctatgggggaggacaatgttatcaacttccccctggacgatttcctgcttccttcagttaaatctggagaagatgtggcagaaaacatagatgtagctgatcgcaagtctgatcagcgcaaagctttcagtggcgattctgtctttgaattcaacgagattgccgctgcaaggggctgccttggacgtttccctggaagtgagatgatgggcatcatcaagaagttcatcaaagcgaagaacgattagtgccagttcaacatactgacgtttgtgtaatctgttgaccttgaggcttccatgtctgtaataattgcaaacaaggatgtattcagagaaccagctcagtctgagatgaataaggcttctcatggatcttgaatcttgcactgaaaagcataaataatctgacctgctgtgtacatttacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0536000, RefSeq:Os12g0536000