BGIOSGA006134

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Revision as of 02:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006134| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006134, complete gene.| tag = OJ1067_...")
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Gene Name

BGIOSGA006134

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006134, complete gene.

LocusTag

OJ1067_B01.6-1

Ensembl Transcript ID

BGIOSGA006134-TA

Ensembl Protein ID

BGIOSGA006134-PA

Length

5114

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24687188..24692301

Sequence Coding Region

24692230..24692301,24689001..24690268,24688797..24688911,24688397..24688624,24688088..24688237
,24687392..24687991,24687188..24687292

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24687188..24692301 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24687188..24692301 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCGGCCGGAGCTCGCCGATGTACGAGGGGCTCGCGTCGCGTCCCGACGAGTGGGACGTCGTCCTCAAGGTGAAGTATGGTGAAACTCTTAAGAGGTTCGGTGGGTATGTGCAAGGACCACAATTCAGCCTGAACTTATCCGCTCTCCGGTCCAAGATTGCATCTGCTTTTAAGTTTGGTTCGGATGTCGACTTCATTCTGACTTACACTGATGAGGATGGGGATATTGTCATGCTGGATGATGATGATGATCTGCATGATGCTGCTATTCATCAGAAACTGAACCCCCTCAGGATTAATGTTCAGTTAAACAACAGCCACACTGCAGCACCTCAGGCCAAACAGCAGGATTCAGATAATATACCTCTCAGGTCCACCACCACTGAAGACCCACTAGCTCATATTAAATCAGTTATCGATGAGGTTTTGAAGCCGATATCTATGAAGTCCATCCAGGAGCCAGTTCCTGAGACACTTGCGAAGCTGTCCCATGAAGTACTTGAAGCCGCATCACCACAATTAGCTGAGCTAATAAAACCTTTTGTTAAACTGGTTACACCAAGCAACAACAACCCATCTAATGGGCATGCTGATGGTTCCTGCAGCTCCTCAACTGGTTTGCCCCAAACACAGGTTGATCCCAAAACTAATGACGAGCCCAAAATAGACACAAGTTTGGGGTCGCAACCCTTGGACACGCAGAACTCCAAATCATCTGGTGCTAGAGGTCTTAAGACTCTGTCAGTTGAGGCTCCTGCTACATCGGGTGTTAAATCTTCTCAAGGTCAACAGGCATCATTATACCCTTCCATTGAGGAGTTGCTGTTCTCCCCCTTTTTACCGAACTCAGGTGATGACAAATCTGCCAGCAAGGGAATTAGTGATGCTCAAAGCAAGGGAAAATCTGTTATGACCTCTGCTACACCACCTACCCCTCCTGCTGCTCCTGCTTTCCGTCCAGCTCCTCCAATTCCATCTCTGAATGATTGGTCTCAGCCACCAGCACGTGGATCGACATTTTACCCATCTATTTGGCAGTCTGAAGCTGATCCAAAAGCCAATAGTGATTCCAGATGGCGTGTTCCATTGTGCAGAGCTGGCCATCCATTCCAACCCCATGCTCCCCTGAGCCGTCCACCCCCACCAATGCCTGCACCAATGAGCTATGGACCTTCTCCACATTTTCCTTACCCTGGCCGCCTCTTGTCCTCTGGCCATCTGCATGGAGACCTTGGTAATAACATTGAGAACTCACCAGCACGCACATTCCATAGATGGATTCAGTGTGATGGTTGTGGAGTGCAACCAATTGTTGGGCCTCGATACAAGTCTAAAACAAAAGAAGATTATGATTTGTGTGATGCCTGCTTTCATCGCATGGGCAATGAGGTCGAGTACACCAGGATTGACAAGCCACTCTTACCCCAGAGATTACTGAGAGACCCTACATTGTGTCGCAAGATCCATTCACGGGCTGCGATGAAGTCAAAGCGGGAGAAACTTGAAAGTCGCTTCATTTTGGATGTAACTGTCCTGGATGGAACATTGATGGCACCTTCAACTCCGTTTACTAAGATTTGGCGTATGCATAACAATGGGTCTATCATGTGGCCCTTGGGCACACAGCTTATATGGGTTGGTGGCGACCAGTTTGCACTGCAGACCTATGTTCCATTAGAGATTCCAGTGGACGGGTTTCCTGTTGATCAGGAGATTGATGTTGCTGTTGATTTTGTGGCACCTGCAAGGCCTGGGAGGTATATATCTTACTGGAGGTTAGCATCACCTTCTGGCCAGAAATTTGGTCAGCGTGTTTGGGTTCACATCCAGGTGGAGGATCCTTCTTTTGTCAGTAACAACAGGACTGCCGCTATAAACTTGAATTTGCCCCCAGAAAGCAATATCACAAACACAAGTAATTTGATTGATGTCAATATTGAGCCTGTGGATCAAGTCTTCAACCAACATGTCAATAGCACAAACAAGGAGTTACTTGAACATTTGATACACCACCAGATTGACGAGCCCAAGAATCCTGAGCCTGCTCCATTACCTGTGCCCATTGTTTCTTCCACAACATCTCTTCACCCCATCATTGATGTTGATGTTCCCTCCAGTTCAACTGCTGCTGCTTTTGTGCCTGTCTTTGATGAGCCTGCGCCTGAACCTGCTGTGACTCCTGTGCCTCCAACTGTTAATGTGCCTGCTGGTAATGCACCTGCGTCTGTTGGTGCATCATCATCTGATCATCATGGCATTGACAATCTCACAGAAGAGAAACTGCTGAAGGAACTTGAGGAAATGGGTTTTAGGCAGGTCGATCTGAACAAGGAGATACTCAGGCAGAACAAGTACAACCTGGAGCAGTCTGTCGATGATCTCTGTGGCGTCAGCGAATGGGACCCTCTCCTGGAGGAGTTGCAGGAAATGGGCTTTGAGGACACTGAGATAAACAAGGAGATGCTCGAGAAGAACGGAGGAAGCATCAAGCGGGCTGTGATGGACCTCATCGCTAGGGAGAAGAAAGACCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MSGRSSPMYEGLASRPDEWDVVLKVKYGETLKRFGGYVQGPQFSLNLSALRSKIASAFKFGSDVDFILTYTDEDGDIVMLDDDDDLHDAAIHQKLNPLRINVQLNNSHTAAPQAKQQDSDNIPLRSTTTEDPLAHIKSVIDEVLKPISMKSIQEPVPETLAKLSHEVLEAASPQLAELIKPFVKLVTPSNNNPSNGHADGSCSSSTGLPQTQVDPKTNDEPKIDTSLGSQPLDTQNSKSSGARGLKTLSVEAPATSGVKSSQGQQASLYPSIEELLFSPFLPNSGDDKSASKGISDAQSKGKSVMTSATPPTPPAAPAFRPAPPIPSLNDWSQPPARGSTFYPSIWQSEADPKANSDSRWRVPLCRAGHPFQPHAPLSRPPPPMPAPMSYGPSPHFPYPGRLLSSGHLHGDLGNNIENSPARTFHRWIQCDGCGVQPIVGPRYKSKTKEDYDLCDACFHRMGNEVEYTRIDKPLLPQRLLRDPTLCRKIHSRAAMKSKREKLESRFILDVTVLDGTLMAPSTPFTKIWRMHNNGSIMWPLGTQLIWVGGDQFALQTYVPLEIPVDGFPVDQEIDVAVDFVAPARPGRYISYWRLASPSGQKFGQRVWVHIQVEDPSFVSNNRTAAINLNLPPESNITNTSNLIDVNIEPVDQVFNQHVNSTNKELLEHLIHHQIDEPKNPEPAPLPVPIVSSTTSLHPIIDVDVPSSSTAAAFVPVFDEPAPEPAVTPVPPTVNVPAGNAPASVGASSSDHHGIDNLTEEKLLKELEEMGFRQVDLNKEILRQNKYNLEQSVDDLCGVSEWDPLLEELQEMGFEDTEINKEMLEKNGGSIKRAVMDLIAREKKDQ</aaseq>

Gene Sequence

<dnaseqindica>1..72#2034..3301#3391..3505#3678..3905#4065..4214#4311..4910#5010..5114#ATGTCCGGCCGGAGCTCGCCGATGTACGAGGGGCTCGCGTCGCGTCCCGACGAGTGGGACGTCGTCCTCAAGGTGAGATGATCGTCTATTTTTCAGGATTGAGCTGTGGTTTTGTTTTGTGATTAGGGGGAGGGGATGGCGGAGGGGGAAGGGGAAGGGGAAAGGGGAATCGCTCCTGGTGGGGGTTTGGGGGAAGCGTGGGGGGCTTGCGTACTTATCGTTTTCGTAGGGTTTGATTGACGAAATGTGTGGTGTTGCGGGATTTGTGTACGCTAGTTAGTTTTTTTTTGGCCTGTGAGAAATTAGGGGAGTTTGATTACTCTTTGTTAGCTTAGAGGTCTGCCCTGGTCTGATTTTTTTTTCTTTTTTTAAGAATCGTCAGCTCGTTTTGATGAATGTCGATTCCTCCGACTGTTGATGACGCGCGCCTGCCTGGTGTTAAACTAATCAAAAAAAGAAAAAAAAAAGAAGAGCCTTCATCTTTTTGCACAAAACAAAAATCATACTCCTACATGAGTTCAGTTTCTAAGATGTATTCTATTCTTTTACCATTCTGATGGGTGTTGGGTATTGGTCAGAAAAAAATAATTCAGCCGTCCTTAATAAGTACTCCTAACAATTATTAGTGGTCTGGTACCATTTCTTAGGCGTATGTTTGAGCTGAGTATATTTCTTGTTGTTTTGATGCAATTATTCACGTACAACCGTGCTTAGTATGTTTATTGTGATTTGTTTCCTTTATGGCCTCACTTGTATATGCTCATGTGCTTACTTCTTGACTGTACTCGACCACATGCAAACTTTCTGAATGTTTCCAAACCTCAAAACTTCTTGAACATTCGATTATCTGCTAGTGTGAAGTTCCCTGTTTGATTGGTGATAGGAATTTATTTGTCTAGTGGGATCATGATCTTGGGATTAAATATTCCCTGGGCCAGGGGAGGTAGTGAGGTATATGGCTAATCTAAATTCTAAAACCTCCAGCTCATGGGGGAGAGGTAATAATACATCTTACCATTTGTAGGCAAACTATTGTCTTCAGCTTCAAATCCGTGTAACTTTCACATGTACAATGATAATCTAGAATGTACTTGCACTTTGTTCAACTGTGGAAATGTTTTTACTCTGTAGGTTTTACTGTTGTTATGCCTTTTTCTAATTGATAGGTACGATGATTATGATATTACTGTTATTTGAAATGAAATCGGGCCAATATTTTGTCCTAGCTGAGATACCGAGATTTAACATCTTCAGTTTGTCTATGCTTTCAGAGTTCATGCTTGCTTTATAAACACACGAGTATATTTTGAGTTCCACTGTTGGTAAAATAACCAAAACTTCTCTAGGATATTTTGCCTTTTAATATACTATTACCTTATACAGTTTATCTACATTCTATCTAATGATATATATGAAACAAGTGATGCCCTCGTTATTGTACACTTCATATAGAACCTTTTTCCTGAATCCGGTGATGCCTGGAGAAACATTGCCCAAAGGAAGGGCTAAACCCATCTATTCAATTAGGAGCCCAGTAATACCATAGGAGTCTGTCTGAGAAATTAACTACCCCCACAATGAATTATTGTATAGACCAAGTGCAGAAAGTCATTGAGCCTTAGCATGGGTTTGTTTTCACTGCTCCTTTTTATTTTCATATTTTAATGTTCATCTAGCTTCCTCTTTCTTAATCAAGTTGCAACAGATATATTTTTGCATCAAGGAAATATGGCAACTGATGAAAATAATTCAATCTTACTATCCTAGGCTCAAATTAGAATAGTAGACATCACAAAAAATAAGTGATTAAACTAAATCCTCTACCATCTGAATGGACCCTATGGATCTTCAACTATTCTTTCAACTGACTTCCTATAAATATGTAATGCAGTTTGGATATGTGTTATCTAGTCCAATTTAATTTCTTGATGGTAAGAATCATACATTGTCTTTCATTGTTCGTGTGTTTTGTGTTGTTTGATTCAAATTTTGTTGTTAGCAGTTCTCAAATTATCCCTTTTCACATATTTCAGGTGAAGTATGGTGAAACTCTTAAGAGGTTCGGTGGGTATGTGCAAGGACCACAATTCAGCCTGAACTTATCCGCTCTCCGGTCCAAGATTGCATCTGCTTTTAAGTTTGGTTCGGATGTCGACTTCATTCTGACTTACACTGATGAGGATGGGGATATTGTCATGCTGGATGATGATGATGATCTGCATGATGCTGCTATTCATCAGAAACTGAACCCCCTCAGGATTAATGTTCAGTTAAACAACAGCCACACTGCAGCACCTCAGGCCAAACAGCAGGATTCAGATAATATACCTCTCAGGTCCACCACCACTGAAGACCCACTAGCTCATATTAAATCAGTTATCGATGAGGTTTTGAAGCCGATATCTATGAAGTCCATCCAGGAGCCAGTTCCTGAGACACTTGCGAAGCTGTCCCATGAAGTACTTGAAGCCGCATCACCACAATTAGCTGAGCTAATAAAACCTTTTGTTAAACTGGTTACACCAAGCAACAACAACCCATCTAATGGGCATGCTGATGGTTCCTGCAGCTCCTCAACTGGTTTGCCCCAAACACAGGTTGATCCCAAAACTAATGACGAGCCCAAAATAGACACAAGTTTGGGGTCGCAACCCTTGGACACGCAGAACTCCAAATCATCTGGTGCTAGAGGTCTTAAGACTCTGTCAGTTGAGGCTCCTGCTACATCGGGTGTTAAATCTTCTCAAGGTCAACAGGCATCATTATACCCTTCCATTGAGGAGTTGCTGTTCTCCCCCTTTTTACCGAACTCAGGTGATGACAAATCTGCCAGCAAGGGAATTAGTGATGCTCAAAGCAAGGGAAAATCTGTTATGACCTCTGCTACACCACCTACCCCTCCTGCTGCTCCTGCTTTCCGTCCAGCTCCTCCAATTCCATCTCTGAATGATTGGTCTCAGCCACCAGCACGTGGATCGACATTTTACCCATCTATTTGGCAGTCTGAAGCTGATCCAAAAGCCAATAGTGATTCCAGATGGCGTGTTCCATTGTGCAGAGCTGGCCATCCATTCCAACCCCATGCTCCCCTGAGCCGTCCACCCCCACCAATGCCTGCACCAATGAGCTATGGACCTTCTCCACATTTTCCTTACCCTGGCCGCCTCTTGTCCTCTGGCCATCTGCATGGAGACCTTGGTAATAACATTGAGAACTCACCAGCACGCACATTCCATAGATGGATTCAGTGTGATGGTTGTGGAGTGCAACCAATTGTTGGGCCTCGATACAAGTCTAAAACGTAAGATTTTAATTGAGCTATTGCTCTATCTAGTTTCTTTTTCCTATCTCAGTATTTGACATCCCTCCTCTTCGCCTCTTTGCCAACAGAAAAGAAGATTATGATTTGTGTGATGCCTGCTTTCATCGCATGGGCAATGAGGTCGAGTACACCAGGATTGACAAGCCACTCTTACCCCAGAGATTACTGAGAGACCCTACATTGGTGAGTACCCAATTTGTAGGCATGAGTGCACAGGCATACGCTTGCACGTGTATGTTTGTCGATGCATTATTTAGCAAACTCATCCATCCTGTACTCTGGTTTGTATAAATAGGTTTAAGGACACAAAATAATATATTAACAATTAGTTTGTCCTATAATTTCTTGGTTTCAGTGTCGCAAGATCCATTCACGGGCTGCGATGAAGTCAAAGCGGGAGAAACTTGAAAGTCGCTTCATTTTGGATGTAACTGTCCTGGATGGAACATTGATGGCACCTTCAACTCCGTTTACTAAGATTTGGCGTATGCATAACAATGGGTCTATCATGTGGCCCTTGGGCACACAGCTTATATGGGTTGGTGGCGACCAGTTTGCACTGCAGACCTATGTTCCATTAGAGGTAGGTACTATGCATACTGTGACCTCTTTTCAGTTTACTGTTCTAATTGTAGTTATGCATACTGTGACCCCTGTTCAGTTTACTGTTTTGACTGTAGTTTAGACTGCATGCTATTTAAAATATGTAAAATCATTAAACCTGAGTTTGTGTTCTGTGCAGATTCCAGTGGACGGGTTTCCTGTTGATCAGGAGATTGATGTTGCTGTTGATTTTGTGGCACCTGCAAGGCCTGGGAGGTATATATCTTACTGGAGGTTAGCATCACCTTCTGGCCAGAAATTTGGTCAGCGTGTTTGGGTTCACATCCAGGTTGTCAACTCTACCATTCCTTTTGTCCATATAGGTCTAGAATCTTGACACTCATACCTATCTTTCTTAACATCTAAATTCTGATTGCATCTGCAGGTGGAGGATCCTTCTTTTGTCAGTAACAACAGGACTGCCGCTATAAACTTGAATTTGCCCCCAGAAAGCAATATCACAAACACAAGTAATTTGATTGATGTCAATATTGAGCCTGTGGATCAAGTCTTCAACCAACATGTCAATAGCACAAACAAGGAGTTACTTGAACATTTGATACACCACCAGATTGACGAGCCCAAGAATCCTGAGCCTGCTCCATTACCTGTGCCCATTGTTTCTTCCACAACATCTCTTCACCCCATCATTGATGTTGATGTTCCCTCCAGTTCAACTGCTGCTGCTTTTGTGCCTGTCTTTGATGAGCCTGCGCCTGAACCTGCTGTGACTCCTGTGCCTCCAACTGTTAATGTGCCTGCTGGTAATGCACCTGCGTCTGTTGGTGCATCATCATCTGATCATCATGGCATTGACAATCTCACAGAAGAGAAACTGCTGAAGGAACTTGAGGAAATGGGTTTTAGGCAGGTCGATCTGAACAAGGAGATACTCAGGCAGAACAAGTACAACCTGGAGCAGTCTGTCGATGATCTCTGTGGCGTCAGCGAATGGGACCCTCTCCTGGAGGAGTTGCAGGAAATGGTAAGATCACATGTGCCCTATTCTGGACAGTGCTCACAGCCTCACAGGCACGAATGTATTGGCAAGGTTCTGAAGTTAGCTGTTGTTTCACCTTTTCAGGGCTTTGAGGACACTGAGATAAACAAGGAGATGCTCGAGAAGAACGGAGGAAGCATCAAGCGGGCTGTGATGGACCTCATCGCTAGGGAGAAGAAAGACCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006134