BGIOSGA006140

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Revision as of 02:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006140| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006140, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA006140

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006140, complete gene.

LocusTag

OSJNBA0016G10.12

Ensembl Transcript ID

BGIOSGA006140-TA

Ensembl Protein ID

BGIOSGA006140-PA

Length

5953

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24616723..24622675

Sequence Coding Region

24622451..24622675,24622045..24622368,24620627..24621853,24619998..24620248,24619784..24619910
,24619123..24619191,24618914..24618987,24618674..24618739,24617871..24617974
,24617609..24617790,24617227..24617326,24616723..24616745

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24616723..24622675 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24616723..24622675 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGCGGCTCGTCGCCGGCGATACGGCCGATCGGCAAGTCGGCGGTGCACCGGATCTGCTCCGGCCAGGTCATCTTCGACCTCTCCTCCGCCGTCAAGGAGCTCGTCGAGAACAGCCTCGACGCCGGCGCCACCACCGTCGAGGTCACCCTCCGCTCCTACGGCGAGGACTCCTTCACCGTCGCCGACAACGGCACCGGCATCTCCCCCACCAATTTCCAGGCGCTCGCTCTGAAGCACCACACCTCCAAGATCTCGGACTTCGGCGACCTCGCCTCCGTCGCCACCTTCGGGTTCCGCGGGGAGGCGCTCAGCTCGCTCTGCGCGCTGGGGAAGCTGACGGTCGAGACGAGGACCAAGGACGAGCCCGTCGGGACGCGCCTGGAGTTCGCGCACTCGGGCGTGGTGACCGGCGAGAGGAAGATGGCGCGGCCGGTCGGGACCGCCGTGACCGTCGAGAAGCTGTTCTCCACGCTGCCGGTCCGGAGCAAGGAGTTCAGCAGGAACATTCGGAAGGAGTACGGGAAAGTGATCTCCTTGCTGAATGCCTATGCGTTGATTGCCAAAGGGGTCAGATTAGTTTGCACAAATACTGTTGGCAAGAATTCTAAATCGGCGGTGCTTAGGACTCAAGGGAGCAGTTCACTGAAAGATAATATCATTACCGTATTTGGTCTGAACACTTTCAAGTGCCTGCAGCCCTTCAATGTGACAATCTCAGAAGGCTGCCAAGTTGATGGCTTTCTTTCCAAACCTGGACCTGGTAGTGGTCGCAATTCAGGGGATAGACAGTTCTTCTATGTTAATGGCAGACCTGTGGATATGCCAAAGGTTTCCAAACTTGTCAATGAGCTGTACAGAAGCTCAAATGCCAAGCAATACCCTGTGGCTGTATTGAATTTCTGTATTCCAACCACATCTTATGATGTGAATGTTGCGCCTGATAAGAGAAAAATTTTCTTCTCATCTGAGCATGCCATTTTGCTATCTTTACGGGAAGGTATTGAGAATCTGTACTGCCCTCAACAATGCAGTTTCTCCATCAACAGCGTTGAAGATCCTGGGAAGGAAATGGACCCAGCCATCGATGGGTCTGATGAAGACATGTGTTTAACAGAAAAGGAGAATGTTTCAGCTCCTGAAAATGACGATGACATGGATGAAACAGATAGTGATGATGAGGTTACACCAGAGAATCAGAAAGTGCCTTCTTCAGTGACAACAAGGGTAGCCACTGGATCTACACCCAAAGATGTGAGCCCCTTGTCAAGAGGCCCACCTGCTCAGCTTGATAGATCTACTTTGCTTTCAGCCTACCGGTATGAACAACGAGAAAAGACGCCTACACGAGTAAAAAGTTATCCAGCACAAGCAAATCATGTTAGAACAGGGCTTGCTGCAAAGTCTTCTCCTTCAAGTGCTGTTCAACCTTCTATTATGAAATTTCTATCACAAAATAAAAGGAAACACGAAGACAGTTGCAATCTTATTTCTGAAGCTCCAGTGCTGAGAAGGGGAACATGCTTGGAGCAAGTGAGGAGAACAGATTTAGGAGTGAATTCACCAACTGCACTAACCTCAAGAGTATCTAATATTCCAGAGGTTAATGCACCTCAAGGAACAAATCCTTTGCGGCACCATTCCCTGCAATCTTTTGTACCTGAGATGCCAGAAGATTCACCACAGCATTCTGAACCACCTAATATTGTTTCTCATCGTGATGAAGTGCCTCAGTTGCGTCCATGTGATGTTCACGCTACAGAATCTGAAGTGGATAACCAGCATGATCCATGCCATTCCAAGTTTGGTGCTCCCAGTCGATGTTCAGAAGTGGAACCCCAAAATAAACTGACAAATATTTCCTTGCCTGATGCTCATTATGATGGTCATGACACTGCAGCACATTCTGGACAATCATCTTATCCAGTTATGCAATTTACACTTGCTGATCTTAGAAGAAGAAGAAGGCATAGTTTTATGATATCACATGCAAAAAAAGGAAGTTTTCCTGAGAAATCAACAAGGTGTTATAAAGCTGCGACACTGGATAACTATGTACCAGATAACGAGGAGGGAAAATCGAATTCTTTAGCTGCAGCCACCAGCGAGTTAGATAAGCTTTTCAGTAAAGATGACTTTGGAGAAATGGAGGTTGTTGGGCAGTTTAATCTTGGTTTTATCATTGGAAAGCTGGACCAGGACCTATTTATTGTTGATCAGCATGCTGCTGATGAGAAGTACAACTTTGAGAACCTTTCACAGTCAACAACTTTAAACATACAGCCTCTCCTTCAACCACTGAGACTTGACCTATCACCAGAGGAAGAAGTTATCGTTTCTATGAACATGAGCACTATCAGAAAGAACGGTTTTGTTTTAGCAGAAGATCTGCATGCTTCACCTTGCAACCGCTATTTTATAAAAGCCGTTCCCTTCAGCAAGAATATTACATTTGGTGCTCAAGATGTGAAGGAGTTAATCTCCATGCTTGCTGACAGTCAAGGTGACTGTTCAATAATCAGCAGTTACAAGCTCGACAGAACTGATTCTATTTGTCCTTCAAGGGTTCGTGCTATGTTGGCTTCGAGGGCTTGCCGAATGTCTACCATGATAGGTGATCCATTGACAAAAACTGAGATGAAGAAGATACTTAAGAATTTGACAGGATTGAGGTCCCCTTGGAATTGCCCTCATGGGAGGCCAACAATGCGCCATCTAGCAGATCTCCATGCTATAAAAACTGAAGGATCGAAGGCAACTTTCTCATGA</cdnaseq>

Protein Sequence

<aaseq>MAGGSSPAIRPIGKSAVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVTLRSYGEDSFTVADNGTGISPTNFQALALKHHTSKISDFGDLASVATFGFRGEALSSLCALGKLTVETRTKDEPVGTRLEFAHSGVVTGERKMARPVGTAVTVEKLFSTLPVRSKEFSRNIRKEYGKVISLLNAYALIAKGVRLVCTNTVGKNSKSAVLRTQGSSSLKDNIITVFGLNTFKCLQPFNVTISEGCQVDGFLSKPGPGSGRNSGDRQFFYVNGRPVDMPKVSKLVNELYRSSNAKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQCSFSINSVEDPGKEMDPAIDGSDEDMCLTEKENVSAPENDDDMDETDSDDEVTPENQKVPSSVTTRVATGSTPKDVSPLSRGPPAQLDRSTLLSAYRYEQREKTPTRVKSYPAQANHVRTGLAAKSSPSSAVQPSIMKFLSQNKRKHEDSCNLISEAPVLRRGTCLEQVRRTDLGVNSPTALTSRVSNIPEVNAPQGTNPLRHHSLQSFVPEMPEDSPQHSEPPNIVSHRDEVPQLRPCDVHATESEVDNQHDPCHSKFGAPSRCSEVEPQNKLTNISLPDAHYDGHDTAAHSGQSSYPVMQFTLADLRRRRRHSFMISHAKKGSFPEKSTRCYKAATLDNYVPDNEEGKSNSLAAATSELDKLFSKDDFGEMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFENLSQSTTLNIQPLLQPLRLDLSPEEEVIVSMNMSTIRKNGFVLAEDLHASPCNRYFIKAVPFSKNITFGAQDVKELISMLADSQGDCSIISSYKLDRTDSICPSRVRAMLASRACRMSTMIGDPLTKTEMKKILKNLTGLRSPWNCPHGRPTMRHLADLHAIKTEGSKATFS</aaseq>

Gene Sequence

<dnaseqindica>1..225#308..631#823..2049#2428..2678#2766..2892#3485..3553#3689..3762#3937..4002#4702..4805#4886..5067#5350..5449#5931..5953#ATGGCCGGCGGCTCGTCGCCGGCGATACGGCCGATCGGCAAGTCGGCGGTGCACCGGATCTGCTCCGGCCAGGTCATCTTCGACCTCTCCTCCGCCGTCAAGGAGCTCGTCGAGAACAGCCTCGACGCCGGCGCCACCACCGTCGAGGTCACCCTCCGCTCCTACGGCGAGGACTCCTTCACCGTCGCCGACAACGGCACCGGCATCTCCCCCACCAATTTCCAGGCACGAATCCCCCCTCTTCTCCTCTCCCATTTGCTGCTTCGCTCTCGCGATTTAGTTGCTGACCGCCATGTGCGCTTCTCAGGCGCTCGCTCTGAAGCACCACACCTCCAAGATCTCGGACTTCGGCGACCTCGCCTCCGTCGCCACCTTCGGGTTCCGCGGGGAGGCGCTCAGCTCGCTCTGCGCGCTGGGGAAGCTGACGGTCGAGACGAGGACCAAGGACGAGCCCGTCGGGACGCGCCTGGAGTTCGCGCACTCGGGCGTGGTGACCGGCGAGAGGAAGATGGCGCGGCCGGTCGGGACCGCCGTGACCGTCGAGAAGCTGTTCTCCACGCTGCCGGTCCGGAGCAAGGAGTTCAGCAGGAACATTCGGAAGGAGTACGGGAAAGTGATCTCCTTGCTGAATGTGAGCTGCCCATCTTATTAGTCCATGTTCGTTTTGCGGGCATTTCAATTTGCGTAAAGCTCATGTATGTTATTAGAATCTAGTTCATCTCCTGATACACATGTTTATACCACTCTGCTGTTTTACTCTACACATGTTTCGTTCTGGTTCTGCTAAGAACTGTGATTTATTTTTTTTCTTTCCCTAATTAGGCCTATGCGTTGATTGCCAAAGGGGTCAGATTAGTTTGCACAAATACTGTTGGCAAGAATTCTAAATCGGCGGTGCTTAGGACTCAAGGGAGCAGTTCACTGAAAGATAATATCATTACCGTATTTGGTCTGAACACTTTCAAGTGCCTGCAGCCCTTCAATGTGACAATCTCAGAAGGCTGCCAAGTTGATGGCTTTCTTTCCAAACCTGGACCTGGTAGTGGTCGCAATTCAGGGGATAGACAGTTCTTCTATGTTAATGGCAGACCTGTGGATATGCCAAAGGTTTCCAAACTTGTCAATGAGCTGTACAGAAGCTCAAATGCCAAGCAATACCCTGTGGCTGTATTGAATTTCTGTATTCCAACCACATCTTATGATGTGAATGTTGCGCCTGATAAGAGAAAAATTTTCTTCTCATCTGAGCATGCCATTTTGCTATCTTTACGGGAAGGTATTGAGAATCTGTACTGCCCTCAACAATGCAGTTTCTCCATCAACAGCGTTGAAGATCCTGGGAAGGAAATGGACCCAGCCATCGATGGGTCTGATGAAGACATGTGTTTAACAGAAAAGGAGAATGTTTCAGCTCCTGAAAATGACGATGACATGGATGAAACAGATAGTGATGATGAGGTTACACCAGAGAATCAGAAAGTGCCTTCTTCAGTGACAACAAGGGTAGCCACTGGATCTACACCCAAAGATGTGAGCCCCTTGTCAAGAGGCCCACCTGCTCAGCTTGATAGATCTACTTTGCTTTCAGCCTACCGGTATGAACAACGAGAAAAGACGCCTACACGAGTAAAAAGTTATCCAGCACAAGCAAATCATGTTAGAACAGGGCTTGCTGCAAAGTCTTCTCCTTCAAGTGCTGTTCAACCTTCTATTATGAAATTTCTATCACAAAATAAAAGGAAACACGAAGACAGTTGCAATCTTATTTCTGAAGCTCCAGTGCTGAGAAGGGGAACATGCTTGGAGCAAGTGAGGAGAACAGATTTAGGAGTGAATTCACCAACTGCACTAACCTCAAGAGTATCTAATATTCCAGAGGTTAATGCACCTCAAGGAACAAATCCTTTGCGGCACCATTCCCTGCAATCTTTTGTACCTGAGATGCCAGAAGATTCACCACAGCATTCTGAACCACCTAATATTGTTTCTCATCGTGATGAAGTGCCTCAGTTGCGTCCATGTGATGTTCACGCTACAGAATCTGAAGTGGTAAGGTAGAATTTTTTGGAGTGAATTCTTCAATTTTCTCCATTATCTTTTATTTTTATTACTTTTATTGCTTTATTTGCCTTGACTGGTTGTTCTGGGCATTCTTGTTAAGTGTGTATGCTTTGTGATCTTATCTTTTAAAGAAGTTCATGGTGAATTTCTCATCTGTTGTCACAAGTCATCTTCAATCTACTCTTAGCTATTTTAACTTCTGCTTAATTTGGATCACTAAACAAGTACTCCAATGTTTGTAGAATAGCTTTTTTTCTGATTGGCTAAATTGTGATTGGGCATGTGTCCAGTTCAAAGAAAAGAGAACCTAGTTTAAACATATGTTGATGAGATTTACTATACAATGAAATGCTGCAATCCTCGCAGGATAACCAGCATGATCCATGCCATTCCAAGTTTGGTGCTCCCAGTCGATGTTCAGAAGTGGAACCCCAAAATAAACTGACAAATATTTCCTTGCCTGATGCTCATTATGATGGTCATGACACTGCAGCACATTCTGGACAATCATCTTATCCAGTTATGCAATTTACACTTGCTGATCTTAGAAGAAGAAGAAGGCATAGTTTTATGATATCACATGCAAAAAAAGGAAGTTTTCCTGAGAAATCAACAAGGTAGCACTTGAAACTATTTTTATAGAAAAGTTATGTTTTCACCAGGCGCTGGGCTTTATGAATTACTAGTTTATTTTTCCTACCTAGGTGTTATAAAGCTGCGACACTGGATAACTATGTACCAGATAACGAGGAGGGAAAATCGAATTCTTTAGCTGCAGCCACCAGCGAGTTAGATAAGCTTTTCAGTAAAGATGACTTTGGAGAAATGGAGGTGCTTGACTTAACTTCAAATTTGAATATTATCAGTTTTCTAAGGTTCCTTGTGAGATTATACTGCTAATATACTGTCAATGAAAGAACACTTGTTATCCAAGTGATAATGTTGCTTATTTTCCCTGCGCGAGTGTTTTCCTTTTTGTCGTTTAAGTGCTATTTCAAAAAGAACTCTTTTATAGTTATATACTCAGTAGCTCAGTGCTTCGGAGGAACCCCAATGACTTTTGTCAATCATGAAATTAAGTTGTACCAATACATTTTGTTTCTTTAGTGGGACCAGCCAGCTATATAACTGTTATTTGTTGTATAATTTTGGTGCTTTGATAGCTTGCTTCTGTTCATGGCCCTATCAAGTACGATAGGTCGTGTGATTCTTGCAAGTTCCTCGCAAGACATATGTTGTCTTTTGTTAATTTTATCTGAAAGCATTTTATTATTGTGAACATTTGTTTTTTACTTGAGTGGTGTGATTTCATTGTTCTAAATAGGATGAAATATTAAAAAAAGTGCTGTATGAATTCTATATTTCTATTTGCAGTACTTTGCTAAAGAAGTTTATGAACACTAAATAACTAGTACACCTTCAGGTTGTTGGGCAGTTTAATCTTGGTTTTATCATTGGAAAGCTGGACCAGGACCTATTTATTGTTGATCAGGTATCTCTCTATAGTCTATACATATTCTATTAATTGATGTCATAGTATTGTATAAACCCCTGGATATCTGGGTTGCACCTTCAAGATACCTTATGTAGTCATGTCTGGTGATTAATGTTTTTTTCTTCTTACTAGCATGCTGCTGATGAGAAGTACAACTTTGAGAACCTTTCACAGTCAACAACTTTAAACATACAGCCTCTCCTTCAGTGAGTAAGCAAAACTTATCATTTCCATCTGTTATTTTGGTACATTGAACTCATTCAGTACCTATTAAATGGTAGGGTGTTTTGTGGTTTGTATTCAGAATGTTGAAATCAGGTTTATTATTACCTTTTGTTATGTATCTCTGGTACTGTATATCTGATTGTATTCAAATACAGACCACTGAGACTTGACCTATCACCAGAGGAAGAAGTTATCGTTTCTATGAACATGAGCACTATCAGGTATTACATTTATTGCGTATTACAACTCAGTTCTGTCTACTACCTTCGGTCACAAATATTTGACTGACATTTAGGACAAGATTTTTCAAACTTTTGAAATTCTGACATTGATAATTTCTCAAATGCTTAGTGTAAAAACAAAAGAAATGGTGTACGCAGATTTGCCTCAAAAAGTACTACTATCATAATACCATAAACTTATTAGATTTTATGAACCTATTCTAGTCATATAAAATTGACGGTTGGAATATAAAAAGTTTAACCAAATCTTGTCCTTAGCATCAAATATTATGACCAGAGGAAGTAATTAACATGTCGGTCAGTCAATTGTTTCCCACTTAGTGCATAACACCTGGAATCATGCACGATTTGTTTTTTTCTCACTCAACAATACTCCCTCCATCCCAAAATATAAGGCACAACTACCACTAACGCATAAACCCAATGGGATCACTCCAATAAATACAATGCATGCACCCAATGGGATTAGAGATTTTAAGGGTGGGTGATTTTTTTTTTAAAAAAAAAGAAATAAAGAGGAGAGGGATGTGCTAGTTAATTGCATGCATGCATGCATATGCATGCCTAATATTATGAAACATCGAAAAAAAGGTGGTTGTGCCTTATATTATGAATGGAGTGAGTAGTTGATAATTAAGAGTGAGCAAAGCTTTACTTGCTATTTTTTTTATCTGTCAGAAAGAACGGTTTTGTTTTAGCAGAAGATCTGCATGCTTCACCTTGCAACCGCTATTTTATAAAAGCCGTTCCCTTCAGCAAGAATATTACATTTGGTGCTCAAGGTATCACTTATTCTCATGTCTGAAATGTACATTTTTATGTGCGTTGAAAAGTGGTTTAATTCTAATTTCCCTTGATTTAGATGTGAAGGAGTTAATCTCCATGCTTGCTGACAGTCAAGGTGACTGTTCAATAATCAGCAGTTACAAGCTCGACAGAACTGATTCTATTTGTCCTTCAAGGGTTCGTGCTATGTTGGCTTCGAGGGCTTGCCGAATGTCTACCATGATAGGTGATCCATTGACAAAAACTGAGATGAAGAAGGTAACCACAGATCAAATTGTTTTTTAAGGATAATTTTTGGAGTAAATTAGCTTTCGATGAAGTAACCTCCAAATGAGCTCCTATAAAAGAAGTGCAAACCTTGTATGGTTTCTGTCTATTCAGAAATTTAATGTCATGATTTAGTTGTGATCAGTGCTCACTACTCCCTAGAAACAATTATTCCTTTATATTTAAGAACCTAACTCAATGAAGCCCTCTTGCATTTGCACTCCAGATACTTAAGAATCTAACTCGATGGAGCATTTTTCTTTTGCACTTCAGATACTTAAGAATTTGACAGGATTGAGGTCCCCTTGGAATTGCCCTCATGGGAGGCCAACAATGCGCCATCTAGCAGATCTCCATGCTATAAAAACTGAAGGTAAGAGATTGTCGGCCAACACTCATATTCTCTAGTTTACATGCTTGTATATGTCTCATCTATATCTGAAGAAAAAGAGTGAAGTTTTCTTGTTTCATTGCAACTCCAAGTAGTTCGAGTCATTATCATCTGCAAATGTATTGTTCTAAGTTCTAAACATTGTAGACAAGGTTGTATCAGATCATCACTGTTGTAATTTCTTGAATAAACAAACCACTCTTCTATTTTTTCACTGAAACAACAAGATTGAAATGTGTTGCCAAGTTCATTGTGTTACAAAAACCTTCTAGTGTAAAAAAAACCCCACTAGGTTTCAGAAATTACGTCAGTCAGAAGCTCACAATCGTTTCTGTATTTTTTGCGTTCTATTCTTTTTTTTTTCACAAAAAGTGGCATGATTAATACTCTTAAGGATTTTAGTGGCAACTCCCTTGAATTATCCAGTTTACAGATCTCATTTCAGTGTTGCAAAATCTCGCAGGATCGAAGGCAACTTTCTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006140

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006140&oldid=59692"