BGIOSGA006141

From RiceWiki
Revision as of 02:34, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA006141| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA006141, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA006141

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA006141, complete gene.

LocusTag

OSJNBA0016G10.11

Ensembl Transcript ID

BGIOSGA006141-TA

Ensembl Protein ID

BGIOSGA006141-PA

Length

4253

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24609630..24613882

Sequence Coding Region

24613739..24613882,24613415..24613642,24612856..24612977,24612551..24612611,24611836..24611976
,24611309..24611416,24610428..24610656,24610023..24610271,24609630..24609712

Genome Context

<gbrowseImage1> name=IndicaChromosome02:24609630..24613882 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:24609630..24613882 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCTCCACGCGGGCGTTGCTCCTCCTCCCCCTCCTCCTCCTCTTCCTCCTCTCCCGCTCCCTCTCCCTCCGCGCCGATCCCGGCGCCGCCGTGTCCAGGATCGCCTTCGGCTCCTGCGCCAACCAGAGCGCGCCCCAGCCCGTGTGGGAGGCCGTCGTGGGGTTCGACCCGCAGGTGTTCATCTGGCTCGGGGACAACGTGTACGGCGACAACAAGAGGCCGTTCCGGGTGTTCGGGAGGGAGAGGACGGTGGGGCCGTGGAGGAACGTGCCGCGGTTCTACCCGTCGACGGAGGCCGAGCTGCGGAGGCGCTACGAGATGGCCAAGGCCAAGCCCGGGTACGCCAAGCTCAGGGAGAGGGCTCAGGTTATTGGAACATGGGATGATCACGATTATGGACTGAATGATGCAGGAAAAGAGTTTGGTGGGAAGGTGACCTCTCAAAGGCTTCTATTAGATTTTCTGGATGAAGCTGAAGATAGTTCACGGAGGCAGCAAGCTGGTGTTTATGCCTCCTACATGTTTGGCCCTGAAGGAAAACGGGTAAAGGTAATTCTGTTGGACACCAGATATCACAGAGACCCTCTATCAAGTGATGGAGCTGTACTGGGAGATCCTCAGTGGCAATGGCTGGAGAGGGAACTGCATGGTCCTCGATCAGAGATCACCATCATTGGATCTTCAATACAAGTAATATCAAATCTATCTGCCACCACTGGACCTTTGTTCTATGTGGAGTCATGGGCACGCTTTCCAAGGGAAAGAGAACGACTGTTCAGACTGATCGATAGCAGTAAGAGAAATGGAGTGTTTTTTATCAGCGGTGATGTTCATTTTGGAGAAATTTCTCGTTATGACTGTGGAGCTCAATATCCATTGTATGATATTACCTCAAGTGGTCTTACCCAATCTGTTGAGAATTCCGTGCCATCAGTATTTCAACCACTTATGAGACTTGTGGCTTTGTTGACACCAACTACCTTGCGAGTCTTTAGCCCTAACTGTCGTTACAAATCATGCACATATGGTCAACCAAACTTTGGAGCAATCGAAATAGATTGGAATGCAGTGCCTCCCCAGATTAAACTCGAACTAAGAGATGTAGAGGGAAACTCTGTTGGTGGTGTGGAGTTTCCTATATCTGAACTGGATCCATCAAAAGCACATGCCATTACAAAACAAGGGCATTCGTACCAACGGCATTGCGCTCTCGAAACAGAGCTTCCATGGCTAGTGCGGCACCGTCTTGCTCTGTTGTTGTTTGGTACAATTGCTGTTCTTGTCATAGCCGTGGTGTTGCTAGGAATTACCTGCTTATCAGCTGCTAATATTTTCACCAAGAAATCCAAGATGGAATAG</cdnaseq>

Protein Sequence

<aaseq>MATSTRALLLLPLLLLFLLSRSLSLRADPGAAVSRIAFGSCANQSAPQPVWEAVVGFDPQVFIWLGDNVYGDNKRPFRVFGRERTVGPWRNVPRFYPSTEAELRRRYEMAKAKPGYAKLRERAQVIGTWDDHDYGLNDAGKEFGGKVTSQRLLLDFLDEAEDSSRRQQAGVYASYMFGPEGKRVKVILLDTRYHRDPLSSDGAVLGDPQWQWLERELHGPRSEITIIGSSIQVISNLSATTGPLFYVESWARFPRERERLFRLIDSSKRNGVFFISGDVHFGEISRYDCGAQYPLYDITSSGLTQSVENSVPSVFQPLMRLVALLTPTTLRVFSPNCRYKSCTYGQPNFGAIEIDWNAVPPQIKLELRDVEGNSVGGVEFPISELDPSKAHAITKQGHSYQRHCALETELPWLVRHRLALLLFGTIAVLVIAVVLLGITCLSAANIFTKKSKME</aaseq>

Gene Sequence

<dnaseqindica>1..144#241..468#906..1027#1272..1332#1907..2047#2467..2574#3227..3455#3612..3860#4171..4253#ATGGCGACCTCCACGCGGGCGTTGCTCCTCCTCCCCCTCCTCCTCCTCTTCCTCCTCTCCCGCTCCCTCTCCCTCCGCGCCGATCCCGGCGCCGCCGTGTCCAGGATCGCCTTCGGCTCCTGCGCCAACCAGAGCGCGCCCCAGGTGCTCGACGAAATGCGCCCCCCCTTCGCCACCCTGATCTCGGATCAATGATCTGATGGGATTTGTGTCTGTGTGTGTGTGTGTGTGTGCGTGCAGCCCGTGTGGGAGGCCGTCGTGGGGTTCGACCCGCAGGTGTTCATCTGGCTCGGGGACAACGTGTACGGCGACAACAAGAGGCCGTTCCGGGTGTTCGGGAGGGAGAGGACGGTGGGGCCGTGGAGGAACGTGCCGCGGTTCTACCCGTCGACGGAGGCCGAGCTGCGGAGGCGCTACGAGATGGCCAAGGCCAAGCCCGGGTACGCCAAGCTCAGGGAGAGGGCTCAGGTGAGAGCTTGTGCAAGACTCGCTGCCGCTCTTTCTTTGTTTTTTGTTTTTTTTTTGCTGCATTGGTAATTGCGCGTTGAAACCTCGAGCTTTGTGTCTGGTGCTCGTGATGACATGTGGGATCTTGTCACCGGTGTTTTACAAACAAGTATAGGTGCTCATTTCTCCCATGAGTCCACGTCCTTGATCATACAGGCGCAGGAGAATTAATGAATCACTTCCATGCTAGAAAGGATCATAAGATCCAACTGAGGATGAATGGCAAACAAGAGTGCTTGTTCATTTTGTTACTTTTATCATGTTTGGGACAGTTTCTGTATCATCCAAACTGAGATTTTGCGACATTGTTATCATTTCCAATTTTAACAGCTCCTCTTTTAAAAATTTAGTGGTTGGAAACACTATGTCAATATCATATCATTCACTAAATTTTGCAGGTTATTGGAACATGGGATGATCACGATTATGGACTGAATGATGCAGGAAAAGAGTTTGGTGGGAAGGTGACCTCTCAAAGGCTTCTATTAGATTTTCTGGATGAAGCTGAAGATAGTTCACGGTATGTACTTGGGAATATTTGAACTGATTTTTATTTTCCTAATGTTCATTTGTTATGATGTCATTTATTTATATTATTGTATTCTAAAATTGCCTTTATTCTTCTTATTGTGTTAAATTTCTTTCTTTCTTTTTTGTTTTTTTTTCCACAACATATATGAACATACCTGTGTAGGTTCTACGGTCTGAATACATAGTTGTAAACCATCAGAAATCTCATAGCGCTCTCTTTCTTGTTTATTTAGGAGGCAGCAAGCTGGTGTTTATGCCTCCTACATGTTTGGCCCTGAAGGAAAACGGGTAAAGGTAAAGTTATATCGTGTCCAATTTTTTCTGCCAATTTTGTTTTTCTTGGAAACCCCTTGTTCAAGCAAGCATCCCCATGCATGAATGTATCAGTTCTCCTTTCCATATGTGGCATGTTCCCCTGTTAACCTTATGATTTGCAACCATGTTACATATCAATCTCCTAGATCACACTGTGAATTCTGCACTTGCCATTCTTGTTCTGGATTACAAAGTGCCCTGTGCTGCAACTTCTTGTTAATCAGTAGTCTTTGGTTTGTTGTTTCAGCTCCTTAAATGGAATTCATAGCATCTTTTAAAATGTGGTAGTATGTGATATCAAGGTTTACAGCAACTTGGTACTATGTGAATACTGAATACAGATGTATATTGTGTCTAGTTGATATTTGTTTTCCTATACATACAGATTTAATGTTGGGTGAAACTATTCAGTTCAAATCCATATAGTGACGCACCACAACAAATATATAACTAGTACATGAGTTGAGAAGTTTCACCCATTTGCAGAACTGGTTGCAGGCACTGCTCCATTGTTACTTTACATGTATTAAAAGATAGCCATACATTACTATAGGTAATTCTGTTGGACACCAGATATCACAGAGACCCTCTATCAAGTGATGGAGCTGTACTGGGAGATCCTCAGTGGCAATGGCTGGAGAGGGAACTGCATGGTCCTCGATCAGAGATCACCATCATTGGATCTTCAATACAAGTAAGATATTGTCTGCCTTGTCCTAATTGAAAGAGCGGATCTAGAATACTGGCTAAAAAATGGATCTGCCAGAGAACAATGAGTAATCATAGTGAATGCCATAAACTAACATCATACATAAAGAAAACTGGCAATATGATAAAACTTGTTATCTTGTCTGGGGTTTGCAAACATAGCCAGCTGTCCATCTTGGACAATTTCGTGGCAGATGATAGTATCCCAATTCCCAGCTAAAGTTATGTATCATTTGTTACATAGATAATTTTTGATAAAATCTTCGATCTATAGTTGCTTTCGATTGAATAGTTGTAACAATACTATTTTTCACCTCTTTGTATTTATGTTTTGCCTTTGATTCTTCATCTTGCATGTGATAGAATTGTTTCAAAATAATACAATTTTCTTCCTATGCACTGCAGGTAATATCAAATCTATCTGCCACCACTGGACCTTTGTTCTATGTGGAGTCATGGGCACGCTTTCCAAGGGAAAGAGAACGACTGTTCAGACTGATCGATAGCAGTAAGGTTGCTTACTTTACTTTCCTATGCAGACAAGCTATTCCTTGATTCTAATCTTTACTGAAAACTCAGTTCTCCTTTACCTGTGCTAAAGTAAAATTCATTGATTTAGTAGTAGCTGGCGTACTTCCTGCATTATTTTTAGAAACATTTTTTTATCAACAATTCACAATATATGGCCTATGTAGAATGCGAAAAGAAAAAAAAATTCTCCTGGCAAGCAGGTGCCCTTTTCTTGTAATACACTGTGAAGTTTAGTTACCTTTTCTCTTCTATATAGCTGTGTTAAATTTTTTTCTTTTTGCGATCTATCAATAGACAATACTCCCTCCGTCCCAGATTATAGGACGGCCTCTTTTCAAGGAAAATCAAAATCGGTAAATTTTGACTAACAATCATACTAACCATATATATGCTAAGTATTATGCATGTTATATCACTAGATTTATATTTTAAAGTACTTTCATGTGATGCTAATTTCATATTATTTCATATTCGTTAGGAAAATAACATGGCATAAATTAATGGTCGAAGTATGTCATTGAAGACCGTGTAAAAAAATAGGCCTTGTAATTTGGGACAGAGGGAGTATCATCTAAAATGGATACTTATCTTATGCATTTGTTATTTCTATGGAACATATGTTGACTTTGTGCAGAGAAATGGAGTGTTTTTTATCAGCGGTGATGTTCATTTTGGAGAAATTTCTCGTTATGACTGTGGAGCTCAATATCCATTGTATGATATTACCTCAAGTGGTCTTACCCAATCTGTTGAGAATTCCGTGCCATCAGTATTTCAACCACTTATGAGACTTGTGGCTTTGTTGACACCAACTACCTTGCGAGTCTTTAGCCCTAACTGTCGTTACAAATCATGCACATATGGTAAGCTTTCCTTTCTTCGAAACAAATAACTGAATAAGTATCAAGAGGGCAGATTTACCCATGAGCATAATAATGTGTCCATCTAATTTATTTCTTCTGTATTTGATCTCACGTGTATTACTTTATCAATTGGTGTTTTGCTGTTGCATTTATCAGGTCAACCAAACTTTGGAGCAATCGAAATAGATTGGAATGCAGTGCCTCCCCAGATTAAACTCGAACTAAGAGATGTAGAGGGAAACTCTGTTGGTGGTGTGGAGTTTCCTATATCTGAACTGGATCCATCAAAAGCACATGCCATTACAAAACAAGGGCATTCGTACCAACGGCATTGCGCTCTCGAAACAGAGCTTCCATGGCTAGTGCGGCACCGTCTTGCTCTGTTGTTGTTTGGTACAATTGCTGGTATGCTGTCTATATCTATCTCAAACTTTTCAGACATCTCTTTTCTTCATACTCCCTCCGTTTCAGGTTATAAGACTTTCTAGCATTGCCCACATTTATATAGATGTTAATGAATCTAGGCACACATATATGTCTAGATTCATTAACATATATATAAATGTGGGCAATGCTAGAAAGTCTTATAATATGAAACGGATGAAGTACATAACAATTGCTCTTGAAATCATCCAGTTTCACGGTCTATTTACGAATTATTTTTGTGAGATCTAGTTTGTGTTGATATATTTCTTGTTTTTTTTTTGTTCTGTAGTTCTTGTCATAGCCGTGGTGTTGCTAGGAATTACCTGCTTATCAGCTGCTAATATTTTCACCAAGAAATCCAAGATGGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA006141

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA006141&oldid=59693"